2,071 research outputs found
Aerodynamic loads on deployed canard surfaces and rocket nose section of the Apollo launch escape vehicle
Aerodynamic loads on deployed canard surfaces and rocket nose section of Apollo launch escape vehicl
Wind-tunnel investigation of the aerodynamic pressures on the Apollo command module configuration
Wind tunnel study of aerodynamic pressures on Apollo command module configuratio
Space sickness predictors suggest fluid shift involvement and possible countermeasures
Preflight data from 64 first time Shuttle crew members were examined retrospectively to predict space sickness severity (NONE, MILD, MODERATE, or SEVERE) by discriminant analysis. From 9 input variables relating to fluid, electrolyte, and cardiovascular status, 8 variables were chosen by discriminant analysis that correctly predicted space sickness severity with 59 pct. success by one method of cross validation on the original sample and 67 pct. by another method. The 8 variables in order of their importance for predicting space sickness severity are sitting systolic blood pressure, serum uric acid, calculated blood volume, serum phosphate, urine osmolality, environmental temperature at the launch site, red cell count, and serum chloride. These results suggest the presence of predisposing physiologic factors to space sickness that implicate a fluid shift etiology. Addition of a 10th input variable, hours spent in the Weightless Environment Training Facility (WETF), improved the prediction of space sickness severity to 66 pct. success by the first method of cross validation on the original sample and to 71 pct. by the second method. The data suggest that WETF training may reduce space sickness severity
Wind-tunnel investigation of the aerodynamic pressures on the Apollo launch escape vehicle configuration
Wind tunnel investigation of aerodynamic pressures on Apollo launch escape vehicle configuratio
Detecting and Accounting for Multiple Sources of Positional Variance in Peak List Registration Analysis and Spin System Grouping
Peak lists derived from nuclear magnetic resonance (NMR) spectra are commonly used as input data for a variety of computer assisted and automated analyses. These include automated protein resonance assignment and protein structure calculation software tools. Prior to these analyses, peak lists must be aligned to each other and sets of related peaks must be grouped based on common chemical shift dimensions. Even when programs can perform peak grouping, they require the user to provide uniform match tolerances or use default values. However, peak grouping is further complicated by multiple sources of variance in peak position limiting the effectiveness of grouping methods that utilize uniform match tolerances. In addition, no method currently exists for deriving peak positional variances from single peak lists for grouping peaks into spin systems, i.e. spin system grouping within a single peak list. Therefore, we developed a complementary pair of peak list registration analysis and spin system grouping algorithms designed to overcome these limitations. We have implemented these algorithms into an approach that can identify multiple dimension-specific positional variances that exist in a single peak list and group peaks from a single peak list into spin systems. The resulting software tools generate a variety of useful statistics on both a single peak list and pairwise peak list alignment, especially for quality assessment of peak list datasets. We used a range of low and high quality experimental solution NMR and solid-state NMR peak lists to assess performance of our registration analysis and grouping algorithms. Analyses show that an algorithm using a single iteration and uniform match tolerances approach is only able to recover from 50 to 80% of the spin systems due to the presence of multiple sources of variance. Our algorithm recovers additional spin systems by reevaluating match tolerances in multiple iterations. To facilitate evaluation of the algorithms, we developed a peak list simulator within our nmrstarlib package that generates user-defined assigned peak lists from a given BMRB entry or database of entries. In addition, over 100,000 simulated peak lists with one or two sources of variance were generated to evaluate the performance and robustness of these new registration analysis and peak grouping algorithms
Registration and Grouping Algorithms in Protein NMR Derived Peak Lists and Their Application in Protein NMR Reference Correction
Nuclear magnetic resonance spectroscopy of proteins (protein NMR) is a powerful analytical technique for studying structure and dynamics of proteins. Almost all aspects of protein NMR have been accelerated by the development of software tools that enable the analysis of NMR spectral data and its utilization in studying protein structure and dynamics. This includes software for raw NMR processing, spectral visualization, protein resonance assignment, and structure determination. However, full automation of protein NMR data analysis is still a work in progress and data analysis still requires an expert NMR spectroscopist utilizing an array of software tools.
While manual resonance assignment with spectral visualization software is tedious and can take a significant amount of time, a variety of automated and semi-automated assignment programs have been developed to facilitate the protein resonance assignment process, specifically for solution and solid-state NMR. But one of the historical problems that has limited the use of automated and semi-automated protein resonance assignment tools along with other analyses of NMR peak lists is the requirement that users specify uniform match tolerances to perform spin systems grouping and linking or rely on default uniform match tolerance values provided by the tool
Evaluasi Jalur Pedestrian Bagi Tunanetra Terhadap Persyaratan Teknis Di Koridor Jalan Sam Ratulangi Kota Manado
Jalur pedestrian merupakan salah satu ruang terbuka publik perkotaan harus dapat diakses oleh semua orang termasuk tunanetra. Salah satu jalur pedestrian bagi tunanetra terdapat di koridor Jalan Sam Ratulangi Manado, tetapi pada Kenyataan tunanetra masih dipandu oleh orang yang dapat melihat dalam berjalan kaki. Jalur pedestrian bagi tunanetra ternyata belum sepenuhnya mengikuti persyaratan perancangan , dimana terdapat empat asas dalam menyediakan fasilitas dan aksesibilitas bagi tunanetra sesuai dengan Peraturan Menteri PU No.30/PRT/M/2006 yaitu keselamatan, kemudahan, kegunaan, dan kemandirian. Penelitian ini menggunakan metodologi kuantitatif rasionalistik dengan pendekatan metode deduktif. Data di analisis secara kuantitatif berdasarkan skala Likert. Populasi tunanetra di kota Manado tahun 2016 berjumlah 198 yang dipilih 67 orang sampel. Lokasi penelitian dibagi menjadi 14 segmen. Variabel dan indikator penelitian terdiri dari: (1) kriteria keselamatan (indikator permukaan pedestrian, kanstein, pagar pengaman, naik/turun penumpang, shelter, kanopi, pohon/tanaman peneduh) dan (2) kriteria kemudahan (indikator ukuran dasar, jalur pemandu/(guiding block), jalur penghubung (ramp), tempat duduk/tempat istirahat, tanda/(sign), tempat sampah). Hasil penelitian ini menyimpulkan bahwa kondisi jalur pedestrian bagi tunanetra terhadap persyaratan teknis di koridor Jalan Sam Ratulangi Kota Manado dari kriteria keselamatan belum sepenuhnya menjamin keselamatan bagi pengguna terutama bagi tunanetra. Demikian pula halnya dari aspek kemudahan, bahwa pelaksanaan beberapa elemen trotoar yang tidak sesuai persyaratan teknis menjadi hambatan bagi pengguna khususnya bagi tunanetra dalam mobilitas. Untuk itu disarankan bagi Pemerintah kota Manado agar melakukan revitalisasi dengan cara menata kembali keberadaan elemen trotoar supaya sesuai dengan pedoman persyaratan teknis yang berlaku
A Less-Biased Analysis of Metalloproteins Reveals Novel Zinc Coordination Geometries
Zinc metalloproteins are involved in many biological processes and play crucial biochemical roles across all domains of life. Local structure around the zinc ion, especially the coordination geometry (CG), is dictated by the protein sequence and is often directly related to the function of the protein. Current methodologies in characterizing zinc metalloproteins\u27 CG consider only previously reported CG models based mainly on nonbiological chemical context. Exceptions to these canonical CG models are either misclassified or discarded as outliers. Thus, we developed a less-biased method that directly handles potential exceptions without pre-assuming any CG model. Our study shows that numerous exceptions could actually be further classified and that new CG models are needed to characterize them. Also, these new CG models are cross-validated by strong correlation between independent structural and functional annotation distance metrics, which is partially lost if these new CGs models are ignored. Furthermore, these new CG models exhibit functional propensities distinct from the canonical CG models
Aberrant Coordination Geometries Discovered in Most Abundant Metalloproteins
Metalloproteins play crucial biochemical roles in our body and are essential across all domains of life. The structural environment around a metal ion, especially the coordination geometry (CG), is both sequentially and functionally relevant. Studies of the metalloprotein’s CG will greatly help alleviate the imbalance between the ample sequence data available and the insufficient knowledge on protein functions. Current methodologies in characterizing metalloproteins’ CG consider only previously reported CG (canonical CG) models based primarily on nonbiological chemical context. Exceptions to these canonical CG models can greatly hamper the ability to characterize metalloproteins both structurally and functionally
Deletion of the Na/K-ATPase alpha1-subunit gene (Atp1a1) does not prevent cavitation of the preimplantation mouse embryo.
Increases in Na/K-ATPase activity occur concurrently with the onset of cavitation and are associated with increases in Na(+)-pump subunit mRNA and protein expression. We have hypothesized that the alpha1-isozyme of the Na/K-ATPase is required to mediate blastocyst formation. We have tested this hypothesis by characterizing preimplantation development in mice with a targeted disruption of the Na/K-ATPase alpha1-subunit (Atp1a1) using embryos acquired from matings between Atp1a1 heterozygous mice. Mouse embryos homozygous for a null mutation in the Na/K-ATPase alpha1-subunit gene are able to undergo compaction and cavitation. These findings demonstrate that trophectoderm transport mechanisms are maintained in the absence of the predominant isozyme of the Na(+)-pump that has previously been localized to the basolateral membranes of mammalian trophectoderm cells. The presence of multiple isoforms of Na/K-ATPase alpha- and beta-subunits at the time of cavitation suggests that there may be a degree of genetic redundancy amongst isoforms of the catalytic alpha-subunit that allows blastocyst formation to progress in the absence of the alpha1-subunit
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