Spatial monitoring of groundwater drawdown and rebound associated with quarry dewatering using automated time-lapse electrical resistivity tomography and distribution guided clustering

Dewatering systems used for mining and quarrying operations often result in highly artificial and complex groundwater conditions, which can be difficult to characterise and monitor using borehole point sampling approaches. Here automated time-lapse electrical resistivity tomography (ALERT) is considered as a means of monitoring subsurface groundwater dynamics associated with changes in the dewatering regime in an operational sand and gravel quarry. We considered two scenarios: the first was unplanned interruption to dewatering due to a pump failure for a period of several days, which involved comparing ALERT monitoring results before and after groundwater rebound; the second involved a planned interruption to pumping over a period of 6 h, for which near-continuous ALERT monitoring of groundwater rebound and drawdown was undertaken. The results of the second test were analysed using distribution guided clustering (DGC) to provide a more quantitative and objective assessment of changes in the subsurface over time. ALERT successfully identified groundwater level changes during both monitoring scenarios. It provided a more useful indication of the rate of water level rise and maximum water levels than piezometer monitoring results. This was due to the piezometers rapidly responding to pressure changes at depth, whilst ALERT/DGC provided information of slower changes associated with the storage and delayed drainage of water within the sediment. By applying DGC we were able to automatically and quantitatively define changes in the resistivity sections, which correlated well with the direct observations of groundwater at site. For ERT monitoring applications that generate numerous time series, the use of DGC could significantly enhance the efficiency of data interpretation, and provide a means of automating groundwater monitoring through assigning alarm thresholds associated with rapid changes in groundwater conditions

The chemistry and isotopic composition of waters in the low-enthalpy geothermal system of Cimino-Vico Volcanic District, Italy

Geothermal energy exploration is based in part on interpretation of the chemistry, temperature, and discharge rate of thermal springs. Here we present the major element chemistry and the δD, δ18O, 87Sr/86Sr and δ11B isoto- pic ratio of groundwater from the low-enthalpy geothermal system near the city of Viterbo in the Cimino-Vico volcanic district of west-Central Italy. The geothermal system hosts many thermal springs and gas vents, but the resource is still unexploited. Water chemistry is controlled by mixing between low salinity,HCO3-rich fresh waters (b24.2 °C) flowing in shallow volcanic rocks and SO4-rich thermal waters (25.3 °C to 62.2 °C) ascending from deep, high permeability Mesozoic limestones. The (equivalent) SO4/Cl (0.01–0.02), Na/Cl (2.82–5.83) and B/Cl ratios (0.02–0.38) of thermal waters differs from the ratios in other geothermal systems from Central Italy, probably implying a lack of hydraulic continuity across the region. The δ18O (−6.6‰ to −5.9‰) and δD (− 40.60‰ to − 36.30‰) isotopic composition of spring water suggest that the recharge area for the geothermal system is the summit region of Mount Cimino. The strontium isotope ratios (87Sr/86Sr) of thermal waters (0.70797–0.70805) are consistent with dissolution of the Mesozoic evaporite-carbonate units that constitute the reservoir, and the ratios of cold fresh waters mainly reflect shallow circulation through the volcanic cover and some minor admixture (b10%) of thermal water as well. The boron isotopic composition (δ11B) of fresh waters (−5.00 and 6.12‰) is similar to that of the volcanic cover, but the δ11B of thermal waters (−8.37‰ to − 4.12‰) is a mismatch for the Mesozoic reservoir rocks and instead reflects dissolution of secondary boron min- erals during fluid ascent through flysch units that overlie the reservoir. A slow and tortuous ascent enhances ex- traction of boron but also promotes conductive cooling, partially masking the heat present in the reservoir. Overall data from this study is consistent with previous studies that concluded that the geothermal system has a large energy potential

Microbial technologies for the discovery of novel bioactive metabolites

Soil microbes represent an important source of biologically active compounds. These molecules present original and unexpected structure and are selective inhibitors of their molecular targets. At Biosearch Italia, discovery of new bioactive molecules is mostly carried out through the exploitation of a proprietary strain collection of over 50000 strains, mostly unusual genera of actinomycetes and uncommon filamentous fungi. A critical element in a drug discovery based on microbial extracts is the isolation of unexploited groups of microorganisms that are at the same time good producers of secondary metabolites. Molecular genetics can assist in these efforts. We will review the development and application of molecular methods for the detection of uncommon genera of actinomycetes in soil DNA and for the rapid dereplication of actinomycete isolates. The results indicate a substantial presence in many soils of the uncommon genera and a large diversity of isolated actinomycetes. However, while uncommon actinomycete strains may provide an increased chance of yielding novel structures, their genetics and physiology are poorly understood. To speed up their manipulation, we have developed vectors capable of stably maintaining large segments of actinomycete DNA in Escherichia coli and of integrating site specifically in the Streptomyces genome. These vectors are suitable for the reconstruction of gene clusters from smaller segment of cloned DNA, the preparation of large-insert libraries from unusual actinomycete strains and the construction of environmental libraries

Estimating the genetic diversity and structure of Quercus trojana Webb populations in Italy by SSRs: implications for management and conservation

Studying the genetic diversity and structure of the current forest populations is essential for evaluating the ability to survive to future biotic and abiotic changes and planning conservation strategies. Quercus trojana is an eastern Mediterranean tree species with a fragmented distribution range, and its westernmost outposts are located in southern Italy. The demand for timber and cropland over the centuries has severely reduced it s occurrence in this part of the range. We assessed the genetic diversity and structure of the extant Italian populations of Q. trojana and derived conservation guidelines. A total of 322 samples were genotyped with six polymorphic nuclear microsatellite markers. Our results reveale d a high genetic diversity in all populations, structured into two main gene pools, and a highly divergent single population. Based on the allelic richness and heterozygosity estimation, we identified populations which can be considered as valuable source material for conservation programs, and those requiring adequate measure to reestablish gene flow and reduce fragmentation. Finally, a comparison with a set of eastern Mediterranean samples indicated a relationship between the Italian and the Greek gene pool; different hypotheses on the Italian gene pool origin were discussed. The need to protect these marginal, disjunct populations was further reinforced.` survivre aux changements biotiques et abiotiques futurs et planifier les stratégies de conservation. Quercus trojana Webb est une espèce arborescente de l’est de la région méditerranéenne caractérisée par une aire de distribution naturelle fragmentée. Ses avant-postes les plus a` l’ouest sont situés dans le sud de l’Italie. Au cours des siècles, la demande pour le bois et les terres destinées a` l’agriculture a sévèrement réduit son occurrence dans cette partie de son aire de distribution. Nous avons évalué la diversité génétique et la structure des populations actuelles de Q. trojana en Italie, afin d’en déduire des lignes directrices pour la conservation. Un total de 322 échantillons ont été génotypés pour six marqueurs nucléaires polymorphes de type microsatellite. Les résultats indiquent qu’il y a une grande diversité génétique dans toutes les populations, structurée en deux pools génétiques principaux, ainsi qu’une population unique très divergente. Sur la base des estimations de richesse allélique et d’hétérozygotie, les populations pouvant être considérées comme une source utile de propagules pour les programmes de conservation ont été identifiées, ainsi que les populations nécessitant des mesures adéquates pour restaurer le flux génique et réduire la fragmentation. Enfin, la comparaison avec un jeu d’échantillons provenant de l’est de la région méditerranéenne montre qu’il existe un lien entre le pool génétique de l’Italie et celui de la Grèce. Différentes hypothèses concernant l’origine du pool génétique italien sont abordées dans la discussion. La protection de ces populations marginales disjointes a encore besoin d’être renforcée