661 research outputs found
Music in Christian education
https://place.asburyseminary.edu/ecommonsatsdissertations/2200/thumbnail.jp
A Mechanochemical Switch to Control Radical Intermediates
B12-dependent enzymes
employ radical species with exceptional
prowess to catalyze some of the most chemically challenging, thermodynamically
unfavorable reactions. However, dealing with highly reactive intermediates
is an extremely demanding task, requiring sophisticated control strategies
to prevent unwanted side reactions. Using hybrid quantum mechanical/molecular
mechanical simulations, we follow the full catalytic cycle of an AdoB12-dependent enzyme and present the details of a mechanism
that utilizes a highly effective mechanochemical switch. When the
switch is “off”, the 5′-deoxyadenosyl radical
moiety is stabilized by releasing the internal strain of an enzyme-imposed
conformation. Turning the switch “on,” the enzyme environment
becomes the driving force to impose a distinct conformation of the
5′-deoxyadenosyl radical to avoid deleterious radical transfer.
This mechanochemical switch illustrates the elaborate way in which
enzymes attain selectivity of extremely chemically challenging reactions
A large-scale proteogenomics study of apicomplexan pathogens-Toxoplasma gondii and Neospora caninum
Proteomics data can supplement genome annotation efforts, for example being used to confirm gene models or correct gene annotation errors. Here, we present a large‐scale proteogenomics study of two important apicomplexan pathogens: Toxoplasma gondii and Neospora caninum. We queried proteomics data against a panel of official and alternate gene models generated directly from RNASeq data, using several newly generated and some previously published MS datasets for this meta‐analysis. We identified a total of 201 996 and 39 953 peptide‐spectrum matches for T. gondii and N. caninum, respectively, at a 1% peptide FDR threshold. This equated to the identification of 30 494 distinct peptide sequences and 2921 proteins (matches to official gene models) for T. gondii, and 8911 peptides/1273 proteins for N. caninum following stringent protein‐level thresholding. We have also identified 289 and 140 loci for T. gondii and N. caninum, respectively, which mapped to RNA‐Seq‐derived gene models used in our analysis and apparently absent from the official annotation (release 10 from EuPathDB) of these species. We present several examples in our study where the RNA‐Seq evidence can help in correction of the current gene model and can help in discovery of potential new genes
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Multistrata exploration and production study
The project objective is to verify a development strategy for high grading areas of multistrate (shallow gas sands and coalbeds) potential in southern West Virginia and test it in up to five wells. Activities for the Multistrata Project began in Fiscal Year 1993 with the placement of the three Test Wells into production full force. By turning all three wells in line October 1, 1992, gas began flowing as designed by the agreements negotiated in Fiscal Year 1992. All the parties involved began to see tangible results as the gas moved from the College`s gathering lines into the systems of Ramco, Columbia, and Mountaineer Gas Companies. The gas production overall from the three Project Test Wells has been exceptional. Work is currently underway which will allow for enhanced production from the College wells. This involves installation of a two-phase, 20 hp gas operated compressor into the main sales line. The College of West Virginia gathering system will be tied directly into a system owned by another local producer and will necessitate the laying of 700 feet of additional pipeline. The compressor will be equipped to suction 1 psi and discharge at 75 psi for delivery of the College`s gas into the host system
Role of P-selectin in platelet sequestration in pulmonary capillaries during endotoxemia
Background: There is growing evidence that platelets accumulate in the lung and contribute to the pathogenesis of acute lung injury during endotoxemia. The aims of the present study were to localize platelet sequestration in the pulmonary microcirculation and to investigate the role of P-selectin as a molecular mechanism of platelet endothelial cell interaction. Methods: We used in vivo fluorescence microscopy to quantify the kinetics of fluorescently labeled erythrocytes and platelets in alveolar capillary networks in rabbit lungs. Results: Six hours after onset of endotoxin infusion we observed a massive rolling along and firm adherence of platelets to lung capillary endothelial cells whereas under control conditions no platelet sequestration was detected. P-selectin was expressed on the surface of separated platelets which were incubated with endotoxin and in lung tissue. Pretreatment of platelets with fucoidin, a P-selectin antagonist, significantly attenuated the endotoxin-induced platelet rolling and adherence. In contrast, intravenous infusion of fucoidin in endotoxin-treated rabbits did not inhibit platelet sequestration in pulmonary capillaries. Conclusion: We conclude that platelets accumulate in alveolar capillaries following endotoxemia. P-selectin expressed on the surface of platelets seems to play an important role in mediating this platelet-endothelial cell interaction. Copyright (c) 2006 S. Karger AG, Basel
Proceedings of the Fourth Annual Agricultural Marketing Conference "Government and Marketing"
Universal features of correlated bursty behaviour
Inhomogeneous temporal processes, like those appearing in human
communications, neuron spike trains, and seismic signals, consist of
high-activity bursty intervals alternating with long low-activity periods. In
recent studies such bursty behavior has been characterized by a fat-tailed
inter-event time distribution, while temporal correlations were measured by the
autocorrelation function. However, these characteristic functions are not
capable to fully characterize temporally correlated heterogenous behavior. Here
we show that the distribution of the number of events in a bursty period serves
as a good indicator of the dependencies, leading to the universal observation
of power-law distribution in a broad class of phenomena. We find that the
correlations in these quite different systems can be commonly interpreted by
memory effects and described by a simple phenomenological model, which displays
temporal behavior qualitatively similar to that in real systems
The Experiment Station
14 pgExperiments started - Experiment in cattle feeding - Analyses of fertilizers and ores - Horticultural Department - Meteorological Departmen
Lysosomes in iron metabolism, ageing and apoptosis
The lysosomal compartment is essential for a variety of cellular functions, including the normal turnover of most long-lived proteins and all organelles. The compartment consists of numerous acidic vesicles (pH ∼4 to 5) that constantly fuse and divide. It receives a large number of hydrolases (∼50) from the trans-Golgi network, and substrates from both the cells’ outside (heterophagy) and inside (autophagy). Many macromolecules contain iron that gives rise to an iron-rich environment in lysosomes that recently have degraded such macromolecules. Iron-rich lysosomes are sensitive to oxidative stress, while ‘resting’ lysosomes, which have not recently participated in autophagic events, are not. The magnitude of oxidative stress determines the degree of lysosomal destabilization and, consequently, whether arrested growth, reparative autophagy, apoptosis, or necrosis will follow. Heterophagy is the first step in the process by which immunocompetent cells modify antigens and produce antibodies, while exocytosis of lysosomal enzymes may promote tumor invasion, angiogenesis, and metastasis. Apart from being an essential turnover process, autophagy is also a mechanism by which cells will be able to sustain temporary starvation and rid themselves of intracellular organisms that have invaded, although some pathogens have evolved mechanisms to prevent their destruction. Mutated lysosomal enzymes are the underlying cause of a number of lysosomal storage diseases involving the accumulation of materials that would be the substrate for the corresponding hydrolases, were they not defective. The normal, low-level diffusion of hydrogen peroxide into iron-rich lysosomes causes the slow formation of lipofuscin in long-lived postmitotic cells, where it occupies a substantial part of the lysosomal compartment at the end of the life span. This seems to result in the diversion of newly produced lysosomal enzymes away from autophagosomes, leading to the accumulation of malfunctioning mitochondria and proteins with consequent cellular dysfunction. If autophagy were a perfect turnover process, postmitotic ageing and several age-related neurodegenerative diseases would, perhaps, not take place
Cell-cell adhesion regulates Merlin/NF2 interaction with the PAF complex
The PAF complex (PAFC) coordinates transcription elongation and mRNA processing and its CDC73/parafibromin subunit functions as a tumour suppressor. The NF2/Merlin tumour suppressor functions both at the cell cortex and nucleus and is a key mediator of contact inhibition but the molecular mechanisms remain unclear. In this study we have used affinity proteomics to identify novel Merlin interacting proteins and show that Merlin forms a complex with multiple proteins involved in RNA processing including the PAFC and the CHD1 chromatin remodeller. Tumour-derived inactivating mutations in both Merlin and the CDC73 PAFC subunit mutually disrupt their interaction and growth suppression by Merlin requires CDC73. Merlin interacts with the PAFC in a cell density-dependent manner and we identify a role for FAT cadherins in regulating the Merlin-PAFC interaction. Our results suggest that in addition to its function within the Hippo pathway, Merlin is part of a tumour suppressor network regulated by cell-cell adhesion which coordinates post-initiation steps of the transcription cycle of genes mediating contact inhibition
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