X-ray induced fragmentation of size-selected salt cluster-ions stored in an ion trap

Peer reviewe

QTL mapping for brown rot (Monilinia fructigena) resistance in an intraspecific peach (Prunus persica L. Batsch) F1 progeny

Brown rot (BR) caused by Monilinia spp. leads to significant post-harvest losses in stone fruit production, especially peach. Previous genetic analyses in peach progenies suggested that BR resistance segregates as a quantitative trait. In order to uncover genomic regions associated with this trait and identify molecular markers for assisted selection (MAS) in peach, an F1 progeny from the cross "Contender" (C, resistant) 7 "Elegant Lady" (EL, susceptible) was chosen for quantitative trait loci (QTL) analysis. Over two phenotyping seasons, skin (SK) and flesh (FL) artificial infections were performed on fruits using a Monilinia fructigena isolate. For each treatment, infection frequency (if) and average rot diameter (rd) were scored. Significant seasonal and intertrait correlations were found. Maturity date (MD) was significantly correlated with disease impact. Sixty-three simple sequence repeats (SSRs) plus 26 single-nucleotide polymorphism (SNP) markers were used to genotype the C 7 EL population and to construct a linkage map. C 7 EL map included the eight Prunus linkage groups (LG), spanning 572.92 cM, with an average interval distance of 6.9 cM, covering 78.73 % of the peach genome (V1.0). Multiple QTL mapping analysis including MD trait as covariate uncovered three genomic regions associated with BR resistance in the two phenotyping seasons: one containing QTLs for SK resistance traits near M1a (LG C 7 EL-2, R2 = 13.1-31.5 %) and EPPISF032 (LG C 7 EL-4, R2 = 11-14 %) and the others containing QTLs for FL resistance, near markers SNP_IGA_320761 and SNP_IGA_321601 (LG3, R2 = 3.0-11.0 %). These results suggest that in the C 7 EL F1 progeny, skin resistance to fungal penetration and flesh resistance to rot spread are distinguishable mechanisms constituting BR resistance trait, associated with different genomic regions. Discovered QTLs and their associated markers could assist selection of new cultivars with enhanced resistance to Monilinia spp. in fruit

Chemical Insights from High-Resolution X-ray Photoelectron Spectroscopy and ab Initio Theory: Propyne, Trifluoropropyne, and Ethynylsulfur Pentafluoride

High-resolution carbon 1s photoelectron spectroscopy of propyne (HC=CH3) shows a spectrum in which the contributions from the three chemically inequivalent carbons are clearly resolved and marked by distinct vibrational structure. This structure is well accounted for by ab initio theory. For 3,3,3-trifluoropropyne (HC=CF3) and ethynylsulfur pentafluoride (HC=SF5), the ethynyl carbons show only a broad structure and have energies that differ only slightly from one another. The core-ionization energies can be qualitatively understood in terms of conventional resonance structures; the vibrational broadening for the fluorinated compounds can be understood in terms of the effects of the electronegative fluorines on the charge distribution. Combining the experimental results with gas-phase acidities and with ab initio calculations provides insights into the effects of initial-state charge distribution and final-state charge redistribution on ionization energies and acidities. In particular, these considerations make it possible to understand the apparent paradox that SF5 and CF3 have much larger electronegativity effects on acidity than they have on carbon 1s ionization energies

The O 1s photoelectron spectrum of molecular oxygen revisited

High-resolution photoelectron spectra of the inner- shell levels of molecular oxygen have been measured using synchrotron radiation. The vibrational structure of the two magnetically-split core-shell components is analyzed based upon ab initio calculations. The ratio between the intensities of the two components was analyzed at several different ionization energies up to about 600 eV, and the same is discussed and compared to high-energy ionization intensities. A theoretical calculation shows very good agreement with the measured spectra. The calculation implements a model where two parity components make up the (4)Sigma peak profile. The gerade-ungerade energy split for this state is found to be 50 meV

Valence photoionization and photoelectron-photoion coincidence (PEPICO) study of molecular LiCl and Li2Cl2

Molecular LiCl and Li2Cl2 have been studied in the vapor phase with valence photoelectron and photoelectron-photoion coincidence spectroscopies. These two techniques determine the binding energies in fundamentally different ways. Binding energies obtained from photoelectron spectra are usually taken as the vertical ionization energies of the corresponding electronic states. In cases with several overlapping bands, corresponding to different electronic states, the coincidence measurement can separate the bands if the respective final states fragment differently. This applies well to the monomer case. To facilitate the determination of state-specific ionization energies in the dimeric molecule, a theoretical Franck-Condon analysis has been carried out. Moreover, ab initio coupled-cluster and density-functional-theory calculations have been used to analyze the fragmentation pattern based on asymptotic dissociation energies. The fragmentation pattern is largely common to all the accessible valence-ionized states of the chiller, consistent with rapid conversion to the ionic ground state before fragmentation. However, the highest-lying state of Li2Cl2+, (2)A(g). shows enhanced propensity for Li+ as dissociation product. (C) 2012 Elsevier B.V. All rights reserved

High resolution C1s and S2p photoelectron spectra of tiophene

Vibrationally resolved C1s and S2p photoelectron spectra of the thiophene molecule have been recorded using monochromated synchrotron radiation at photon energies of 330 eV and 210 eV, respectively. The photoelectron bands contain complex vibrational structures which are analyzed using ab initio and curve-fitting procedures. The analysis is in good agreement with the experimental spectrum which enables identification of two chemically shifted carbon 1s core hole states. We were also able to determine the molecular-field splitting of the S2p3/2 ionic state to about 99 meV. The molecular-field splitting was moreover calculated using second-order Møller–Plesset perturbation theory, confirming the result from the fitting procedure

Two size regimes of methanol clusters produced by adiabatic expansion

Free neutral methanol clusters produced by adiabatic expansion have been studied by photoelectron spectroscopy and line shape modeling. The results show that clusters belonging to two distinct size regimes can be produced by changing the expansion conditions. While the larger size regime can be well described by line shapes calculated for clusters consisting of hundreds of molecules, the smaller size regime corresponds to methanol oligomers, predominantly of cyclic structure. There is little contribution from dimers to the spectra

First observation of vibrations in core-level photoelectron spectra of free neutral molecular clusters

Core-level photoelectron spectra of free neutral methane clusters have been recorded. These spectra exhibit well-resolved surface and bulk features as well as vibrational fine structure. The vibrational structure in the cluster signal is well reproduced by a theoretical model that assumes independent contributions from inter- and intramolecular modes. The intramolecular contribution to the vibrational line-shape is taken to be equal to that of the monomer in the gas phase, while the intermolecular part is simplified to line broadening. An estimate of the cluster size has been made on the basis of the observed surface-to-bulk intensity ratio