199 research outputs found
The microbiotest battery as an important component in the assessment of snowmelt toxicity in urban watercourses—preliminary studies
The aim of the study was to use a battery of
biotests composed of producers (Selenastrum
capricornutum, Sorghum saccharatum, Lepidium
sativum, and Sinapis alba), consumers (Thamnocephalus
platyurus), and decomposers (Tetrahymena thermophila)
to evaluate the toxicity of snowmelt and winter storm
water samples. The toxicity of the samples collected in
the winter period December to February (2010–2011), in
one of the largest agglomerations in Poland, the city of
Lodz, was compared to that of storm water samples taken
under similar conditions in June. The most toxic snowmelt
samples were found to be high acute hazard (class IV),
while the remaining samples were rated as slight acute
hazard (class II). L. sativum (in the Phytotox test) was the
most sensitive test organism, giving 27 % of all toxic
responses, followed by S. capricornutum with 23 % of
all responses. T. thermophila was the least sensitive, with
only 2 % of all toxic responses. The greatest range of
toxicity was demonstrated by samples from the single
family house catchment: no acute hazard (class I) to high
acute hazard (class IV
Bacteria homologus to Aeromonas capable of microcystin degradation
Water blooms dominated by cyanobacteria
are capable of producing hepatotoxins known as
microcystins. These toxins are dangerous to people and
to the environment. Therefore, for a better understanding
of the biological termination of this increasingly
common phenomenon, bacteria with the potential to
degrade cyanobacteria-derived hepatotoxins and the
degradative activity of culturable bacteria were studied.
Based on the presence of the mlrA gene, bacteria with a
homology to the Sphingopyxis and Stenotrophomonas
genera were identified as those presenting potential for
microcystins degradation directly in the water samples
from the Sulejów Reservoir (SU, Central Poland). However,
this biodegrading potential has not been confirmed in in
vitro experiments. The degrading activity of the culturable
isolates from the water studied was determined in more
than 30 bacterial mixes. An analysis of the biodegradation
of the microcystin-LR (MC-LR) together with an analysis of
the phylogenetic affiliation of bacteria demonstrated for
the first time that bacteria homologous to the Aeromonas
genus were able to degrade the mentioned hepatotoxin,
although the mlrA gene was not amplified. The maximal
removal efficiency of MC-LR was 48%. This study
demonstrates a new aspect of interactions between the
microcystin-containing cyanobacteria and bacteria from
the Aeromonas genus.The authors would like to
acknowledge the European Cooperation in Science
and Technology, COST Action ES 1105 “CYANOCOST -
Cyanobacterial blooms and toxins in water resources:
Occurrence, impacts and management” for adding value
to this study through networking and knowledge sharing
with European experts and researchers in the field. The
Sulejów Reservoir is a part of the Polish National Long-
Term Ecosystem Research Network and the European
LTER site
Četiri nove vrste roda Aceria (Acari: Eriophyoidea) iz Srbije
Four new species of eriophyoid mites within the genus Aceria, from Serbia are described and illustrated: A. cichorii n. sp. causing 'witches broom' on Cichorium intybus L. (Asteraceae), A. matricariae n. sp. free living in flower heads of Matricaria chamomilla L. (Asteraceae), A. cirsii n. sp. free living on Cirsium rivulare (Jacq.) All. (Asteraceae) and A. carduui n. sp. free living on Carduus personata (L.) Jacq. (Asteraceae).U radu su opisane četiri nove vrste eriofida iz roda Aceria (Acari Erophyoidea): Aceria cichorii n. sp. ca Cichorium intybus L., A. matricariae n. sp. sa Matricaria chamomilla L., A. cirsii n. sp. sa Cirsium rivulare (Jacq.) All. i A. carduui n. sp. sa Carduus personata (L.) Jacq. Nove vrste su nacrtane i opisane, a priložene je i diferencijalna dijagnoza u odnosu na Aceria baccharices K., A. chondrillae (Can.), A. anthocoptes (Nal.) i A. balasi Farkas
Novel Timothy Syndrome Mutation Leading to Increase in CACNA1C Window Current
Background
Timothy syndrome (TS) is a rare multisystem genetic disorder characterized by a myriad of abnormalities, including QT prolongation, syndactyly, and neurologic symptoms. The predominant genetic causes are recurrent de novo missense mutations in exon 8/8A of the CACNA1C-encoded L-type calcium channel; however, some cases remain genetically elusive.
Objective
The purpose of this study was to identify the genetic cause of TS in a patient who did not harbor a CACNA1C mutation in exon 8/A, and was negative for all other plausible genetic substrates.
Methods
Diagnostic exome sequencing was used to identify the genetic substrate responsible for our case of TS. The identified mutation was characterized using whole-cell patch-clamp technique, and the results of these analyses were modeled using a modified Luo–Rudy dynamic model to determine the effects on the cardiac action potential.
Results
Whole exome sequencing revealed a novel CACNA1C mutation, p.Ile1166Thr, in a young male with diagnosed TS. Functional electrophysiologic analysis identified a novel mechanism of TS-mediated disease, with an overall loss of current density and a gain-of-function shift in activation, leading to an increased window current. Modeling studies of this variant predicted prolongation of the action potential as well as the development of spontaneous early afterdepolarizations.
Conclusion
Through expanded whole exome sequencing, we identified a novel genetic substrate for TS, p.Ile1166Thr-CACNA1C. Electrophysiologic experiments combined with modeling studies have identified a novel TS mechanism through increased window current. Therefore, expanded genetic testing in cases of TS to the entire CACNA1C coding region, if initial targeted testing is negative, may be warranted
Human Small Heat Shock Protein B8 Inhibits Protein Aggregation without Affecting the Native Folding Process
: Small Heat Shock Proteins (sHSPs) are key components of our Protein Quality Control system and are thought to act as reservoirs that neutralize irreversible protein aggregation. Yet, sHSPs can also act as sequestrases, promoting protein sequestration into aggregates, thus challenging our understanding of their exact mechanisms of action. Here, we employ optical tweezers to explore the mechanisms of action of the human small heat shock protein HSPB8 and its pathogenic mutant K141E, which is associated with neuromuscular disease. Through single-molecule manipulation experiments, we studied how HSPB8 and its K141E mutant affect the refolding and aggregation processes of the maltose binding protein. Our data show that HSPB8 selectively suppresses protein aggregation without affecting the native folding process. This anti-aggregation mechanism is distinct from previous models that rely on the stabilization of unfolded polypeptide chains or partially folded structures, as has been reported for other chaperones. Rather, it appears that HSPB8 selectively recognizes and binds to aggregated species formed at the early stages of aggregation, preventing them from growing into larger aggregated structures. Consistently, the K141E mutation specifically targets the affinity for aggregated structures without impacting native folding, and hence impairs its anti-aggregation activity
Novel pathogenic variant in TGFBR2 confirmed by molecular modeling is a rare cause of Loeys-Dietz syndrome
Loeys-Dietz syndrome (LDS) is a connective tissue disorder characterized by vascular findings of aneurysm and/or dissection of cerebral, thoracic, or abdominal arteries and skeletal findings. We report a case of a novel pathogenic variant in TGFBR2 and phenotype consistent with classic LDS. The proband was a 10-year-old presenting to the genetics clinic with an enlarged aortic root (Z-scores 5-6), pectus excavatum, and congenital contractures of the right 2nd and 3rd digit. Molecular testing of TGFBR2 was sent to a commercial laboratory and demonstrated a novel, likely pathogenic, variant in exon 4, c.1061T>C, p.(L354P). Molecular modeling reveals alteration of local protein structure as a result of this pathogenic variant. This pathogenic variant has not been previously reported in LDS and thus expands the pathogenic variant spectrum of this condition
First Report of Bilateral External Auditory Canal Cochlin Aggregates (“Cochlinomas”) with Multifocal Amyloid-Like Deposits, Associated with Sensorineural Hearing Loss and a Novel Genetic Variant in COCH Encoding Cochlin
Regulation of GAP43/calmodulin complex formation via calcineurin-dependent mechanism in differentiated PC12 cells with altered PMCA isoforms composition
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