Detection and accurate identification of new or emerging bacteria in cystic fibrosis patients

AbstractRespiratory infections remain a major threat to cystic fibrosis (CF) patients. The detection and correct identification of the bacteria implicated in these infections is critical for the therapeutic management of patients. The traditional methods of culture and phenotypic identification of bacteria lack both sensitivity and specificity because many bacteria can be missed and/or misidentified. Molecular analyses have recently emerged as useful means to resolve these problems, including molecular methods for accurate identification or detection of bacteria and molecular methods for evaluation of microbial diversity. These recent molecular technologies have increased the list of new and/or emerging pathogens and epidemic strains associated with CF patients. Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry of intact cells has also emerged recently as a powerful and rapid method for the routine identification of bacteria in clinical microbiology laboratories and will certainly represent the method of choice also for the routine identification of bacteria in the context of CF. Finally, recent data derived from molecular culture-independent analyses indicate the presence of a previously underestimated, complex microbial community in sputa from CF patients. Interestingly, full genome sequencing of some bacteria frequently recovered from CF patients has highlighted the fact that the lungs of CF patients are hoT-SPOTs for lateral gene transfer and the adaptation of these ecosystems to a specific chronic condition

Training-induced inversion of spontaneous exchange bias field on La1.5Ca0.5CoMnO6

In this work we report the synthesis and structural, electronic and magnetic properties of La1.5Ca0.5CoMnO6 double-perovskite. This is a re-entrant spin cluster material which exhibits a non-negligible negative exchange bias effect when it is cooled in zero magnetic field from an unmagnetized state down to low temperature. X-ray powder diffraction, X-ray photoelectron spectroscopy and magnetometry results indicate mixed valence state at Co site, leading to competing magnetic phases and uncompensated spins at the magnetic interfaces. We compare the results for this Ca-doped material with those reported for the resemblant compound La1.5Sr0.5CoMnO6, and discuss the much smaller spontaneous exchange bias effect observed for the former in terms of its structural and magnetic particularities. For La1.5Ca0.5CoMnO6, when successive magnetization loops are carried, the spontaneous exchange bias field inverts its sign from negative to positive from the first to the second measurement. We discuss this behavior based on the disorder at the magnetic interfaces, related to the presence of a glassy phase. This compound also exhibits a large conventional exchange bias, for which there is no sign inversion of the exchange bias field for consecutive cycles

Dynamics of Counterion Condensation

Using a generalization of the Poisson-Boltzmann equation, dynamics of counterion condensation is studied. For a single charged plate in the presence of counterions, it is shown that the approach to equilibrium is diffusive. In the far from equilibrium case of a moving charged plate, a dynamical counterion condensation transition occurs at a critical velocity. The complex dynamic behavior of the counterion cloud is shown to lead to a novel nonlinear force-velocity relation for the moving plate.Comment: 5 pages, 1 ps figure included using eps

Compensation temperatures and exchange bias in La1.5Ca0.5CoIrO6

We report on the study of magnetic properties of the La1.5Ca0.5CoIrO6 double perovskite. Via ac magnetic susceptibility we have observed evidence of weak ferromagnetism and reentrant spin glass behavior on an antiferromagnetic matrix. Regarding the magnetic behavior as a function of temperature, we have found that the material displays up to three inversions of its magnetization, depending on the appropriate choice of the applied magnetic field. At low temperature the material exhibit exchange bias effect when it is cooled in the presence of a magnetic field. Also, our results indicate that this effect may be observed even when the system is cooled at zero field. Supported by other measurements and also by electronic structure calculations, we discuss the magnetic reversals and spontaneous exchange bias effect in terms of magnetic phase separation and magnetic frustration of Ir4+ ions located between the antiferromagnetically coupled Co ions.Comment: 10 pages, 8 figures and supplemental materia

Pressure and chemical substitution effects in the local atomic structure of BaFe2As2

The effects of K and Co substitutions and quasi-hydrostatic applied pressure (P<9 GPa) in the local atomic structure of BaFe2As2, Ba(Fe{0.937}Co{0.063})2As2 and Ba{0.85}K{0.15}Fe2As2 superconductors were investigated by extended x-ray absorption fine structure (EXAFS) measurements in the As K absorption edge. The As-Fe bond length is found to be slightly reduced (<~ 0.01 Angstroms) by both Co and K substitutions, without any observable increment in the corresponding Debye Waller factor. Also, this bond is shown to be compressible (k = 3.3(3)x10^{-3} GPa^{-1}). The observed contractions of As-Fe bond under pressure and chemical substitutions are likely related with a reduction of the local Fe magnetic moments, and should be an important tuning parameter in the phase diagrams of the Fe-based superconductors.Comment: 7 pages, 6 figure

Quantitative study of molecular N_2 trapped in disordered GaN:O films

The structure of disordered GaN:O films grown by ion-assisted deposition is investigated using x-ray absorption near-edge spectroscopy and Raman spectroscopy. It is found that between 4 and 21 % of the nitrogen in the films is in the form of molecular N_2 that interacts only weakly with the surrounding matrix. The anion to cation ratio in the GaN:O host remains close to unity, and there is a close correlation between the N_2 fraction, the level of oxygen impurities, and the absence of short-range order in the GaN:O matrix.Comment: 5 pages, 3 figure

Diferentes teores de proteína metabolizável em rações com cana-de-açúcar para vacas em lactação.

O presente trabalho teve como objetivo avaliar o efeito de diferentes teores de proteína metabolizável (PM) na ração de vacas lactantes alimentadas com cana-de-açúcar

Composição química e digestibilidade in vitro do pedúnculo de caju.

O presente trabalho se propõe a avaliar a composição química-bromatológica e a digestibilidade in vitro do pedúnculo de caju, um subproduto fibroso, tratado ou não tratado com ureia

Hard X-ray spectroscopy of the itinerant magnets RRFe4_{4}Sb12_{12} (R=R=Na, K, Ca, Sr, Ba)

Ordered states in itinerant magnets may be related to magnetic moments displaying some weak local moment characteristics, as in intermetallic compounds hosting transition metal coordination complexes. In this paper, we report on the Fe $K$-edge X-ray absorption spectroscopy (XAS) of the itinerant magnets $R$Fe$_{4}$Sb$_{12}$ ($R=$ Na, K, Ca, Sr, Ba), aiming at exploring the electronic and structural properties of the octahedral building block formed by Fe and the Sb ligands. We find evidence for strong hybridization between the Fe $3d$ and Sb $5p$ states at the Fermi level, giving experimental support to previous electronic structure calculations of the $R$Fe$_{4}$Sb$_{12}$ skutterudites. The electronic states derived from Fe 3$d$ Sb $5p$ mixing are shown to be either more occupied and/or less localized in the cases of the magnetically ordered systems, for which $R=$ Na or K, connecting the local Fe electronic structure to the itinerant magnetic properties. Moreover, the analysis of the extended region of the XAS spectra (EXAFS) suggests that bond disorder may be a more relevant parameter to explain the suppression of the ferromagnetic ordered state in CaFe$_{4}$Sb$_{12}$ than the decrease of the density of states.Comment: 7 pages, 5 figures, submitte