Trade-off between constitutive and inducible resistance against herbivores is only partially explained by gene expression and glucosinolate production

The observed partial correlation between herbivore resistance, defensive metabolites accumulation, and gene expression suggests a complex network of gene interactions governing the postulated trade-off between constitutive defences and their inducibilit

Hybridization as a threat in climate relict Nuphar pumila (Nymphaeaceae)

Field studies and conceptual work on hybridization-mediated extinction risk in climate relicts are extremely rare. Nuphar pumila (Nymphaeaceae) is one of the most emblematic climate relicts in Europe with few isolated populations in the Alpine arc. The extent of introgression with related lowland and generalist species Nupharlutea has never been studied using molecular methods. All biogeographical regions where N.pumila naturally occurs in the neighbourhood of the Alpine arc were sampled and studied using nuclear microsatellite markers. Furthermore, we used forward-in-time simulations and Approximate Bayesian Computation to check whether an introgression scenario fits with the observed admixture patterns and estimated the demographic parameters associated with this process. Our study confirms ongoing hybridization between N.pumila and N.lutea and validates it by the use of population models. More than 40 % of investigated N.pumila individuals were admixed and hybrids were found in over 60 % of studied populations. The introgression is bidirectional and is most likely a result of very recent gene flow. Our work provides strong evidence for rapid extinction risk and demographic swamping between specialized climatic relicts and closely related generalists. The remaining pure populations of N.pumila are rare in the Alpine arc and deserve high conservation priority

High elevation Plantago lanceolata plants are less resistant to herbivory than their low elevation conspecifics: is it just temperature?

Traits that mediate species interactions are evolutionarily shaped by biotic and abiotic drivers, yet we know relatively little about the relative importance of these factors. Herbivore pressure, along with resource availability and ‘third-party’ mutualists, are hypothesized to play a major role in the evolution of plant defence traits. Here, we used the model system Plantago lanceolata, which grows along steep elevation gradients in the Swiss Alps, to investigate the effect of elevation, herbivore pressure, mycorrhizal inoculation and temperature on plant resistance. Over a 1200 m elevation gradient, the levels of herbivory and iridoid glycosides (IGs) declined with increasing elevation. By planting seedlings at three different elevations, we further showed that both low-elevation growing conditions and mycorrhizal inoculation resulted in increased plant resistance to herbivores. Finally, using a temperature-controlled experiment comparing high- and low-elevation ecotypes, we showed that high-elevation ecotypes are less resistant to herbivory, and that lower temperatures impair IGs deployment after herbivore attack. We thus propose that both lower herbivore pressure, and colder temperatures relax the defense syndrome of high elevation plants

Glacial relicts in the Alps: the decline and conservation strategy for Nuphar pumila (Nymphaeaceae)

The Alps played an important role in the biogeography of European plants and acted as a refugium for numerous species during the interglacial cycles. We investigated Nuphar pumila, one of the most emblematic glacial relicts of the Alps, by carrying out exhaustive literature and field surveys to collect relevant data on its distribution and threats. We further evaluated the level of introgression with the closely related N. lutea based on microsatellite data from natural populations across the Alps as well as from all ex situ collections and reintroductions in Switzerland. According to our results, more than 60% of the known N. pumila populations went extinct, and the species currently presents 37 natural populations in the investigated area. A large number of populations were affected by eutrophication (69%) and hybridization with N. lutea (53%). Priority should be given to the in situ conservation of genetically pure populations, while ex situ cultures should be applied to nearly extinct populations and the genetically pure individuals still present in hybrid populations. N. pumila is an excellent representative of the wetland/aquatic glacial relicts that are particularly affected by the combination of climate change and habitat degradation. International integration of research and conservation programs is needed to limit the decline of such rare species in the Alps

Data from: Hybridization as a threat in climate relict Nuphar pumila (Nymphaeaceae)

Field studies and conceptual work on hybridization-mediated extinction risk in climate relicts are extremely rare. Nuphar pumila (Nymphaeaceae) is one of the most emblematic climate relicts in Europe with few isolated populations in the Alpine arc. The extent of introgression with related lowland and generalist species Nuphar lutea has never been studied using molecular methods. All biogeographical regions where N. pumila naturally occurs in the neighbourhood of the Alpine arc were sampled and studied using nuclear microsatellite markers. Furthermore, we used forward-in-time simulations and Approximate Bayesian Computation to check whether an introgression scenario fits with the observed admixture patterns and estimated the demographic parameters associated with this process. Our study confirms ongoing hybridization between N. pumila and N. lutea and validates it by the use of population models. More than 40 % of investigated N. pumila individuals were admixed and hybrids were found in over 60 % of studied populations. The introgression is bidirectional and is most likely a result of very recent gene flow. Our work provides strong evidence for rapid extinction risk and demographic swamping between specialized climatic relicts and closely related generalists. The remaining pure populations of N. pumila are rare in the Alpine arc and deserve high conservation priority

Nuphar_ABC_Arrigo2016

This folder contains: - SSR/ = empirical SSR dataset - data/ = ini files, hard coded - Qoutputs/ = quantinemo outputs - Qparams/ = quantinemo parameter files - Qstats/ = final summary stats - scripts/ = all needed scripts, look at README.jpg to get an idea how how the pipeline works - quantinemo = QuantiNemo V 1.6.0 (unreleased), can be downloaded at http://www.unil.ch/popgen/softwares/quantinemo/blaser_et_al_evolution.zip otherwise, contact Samuel Neuenschwander for getting a copy. Note that the pipeline must be started from scripts/ using the following command: perl ABC_loader.pl ncores nmax -ncore = number of parallel instances of quantiNemo you want to run -nmax = launch jobs until reaching nmax CPU load Dependencies: ## Linux OS, Ubuntu 10.04 ## Perl v5.10.1 threads; threads::shared; File::Basename; List::Util qw(shuffle); ## R >= 3.0.0 e1071 ## QuantiNemo: V 1.6.