33 research outputs found
Studies on Structure and Dynamics of Components of Phytochrome Mediated Light Signaling in Plants and Cyanobacteria
From a structural point of view, phytochrome mediated light signaling in plants and bacteria constitutes a scarcely understood system. Albeit the tremendous research activity in the field, no X-ray or NMR-based structural information is available. For the first time now, the crystal structures of two cyanobacterial response regulators (RR), which directly interact with bacterial phytochrome receptors, have been solved. This could be accomplished by heterologous expression, purification and crystallization of the proteins, and X-ray structure determination, employing multiple anomalous wavelength dispersion (MAD) and molecular replacement (MR) techniques
Measuring Five Dimensions of Religiosity Across Adolescence
This paper theorizes and tests a latent variable model of adolescent religiosity in which five dimensions of religiosity are interrelated: religious beliefs, religious exclusivity, external religiosity, private practice, and religious salience. Research often theorizes overlapping and independent influences of single items or dimensions of religiosity on outcomes such as adolescent sexual behavior, but rarely operationalizes the dimensions in a measurement model accounting for their associations with each other and across time. We use longitudinal structural equation modeling (SEM) with latent variables to analyze data from two waves of the National Study of Youth and Religion. We test our hypothesized measurement model as compared to four alternate measurement models and find that our proposed model maintains superior fit. We then discuss the associations between the five dimensions of religiosity we measure and how these change over time. Our findings suggest how future research might better operationalize multiple dimensions of religiosity in studies of the influence of religion in adolescence
Searching for High-energy Neutrino Emission from Galaxy Clusters with IceCube
Galaxy clusters have the potential to accelerate cosmic rays (CRs) to ultrahigh energies via accretion shocks or embedded CR acceleration sites. The CRs with energies below the Hillas condition will be confined within the cluster and eventually interact with the intracluster medium gas to produce secondary neutrinos and gamma rays. Using 9.5 yr of muon neutrino track events from the IceCube Neutrino Observatory, we report the results of a stacking analysis of 1094 galaxy clusters with masses âł10 Mâ and redshifts between 0.01 and âŒ1 detected by the Planck mission via the SunyaevâZelâdovich effect. We find no evidence for significant neutrino emission and report upper limits on the cumulative unresolved neutrino flux from massive galaxy clusters after accounting for the completeness of the catalog up to a redshift of 2, assuming three different weighting scenarios for the stacking and three different power-law spectra. Weighting the sources according to mass and distance, we set upper limits at a 90% confidence level that constrain the flux of neutrinos from massive galaxy clusters (âł10 Mâ) to be no more than 4.6% of the diffuse IceCube observations at 100 TeV, assuming an unbroken Eâ power-law spectrum
Searches for Neutrinos from Gamma-Ray Bursts using the IceCube Neutrino Observatory
Gamma-ray bursts (GRBs) are considered as promising sources of
ultra-high-energy cosmic rays (UHECRs) due to their large power output.
Observing a neutrino flux from GRBs would offer evidence that GRBs are hadronic
accelerators of UHECRs. Previous IceCube analyses, which primarily focused on
neutrinos arriving in temporal coincidence with the prompt gamma rays, found no
significant neutrino excess. The four analyses presented in this paper extend
the region of interest to 14 days before and after the prompt phase, including
generic extended time windows and targeted precursor searches. GRBs were
selected between May 2011 and October 2018 to align with the data set of
candidate muon-neutrino events observed by IceCube. No evidence of correlation
between neutrino events and GRBs was found in these analyses. Limits are set to
constrain the contribution of the cosmic GRB population to the diffuse
astrophysical neutrino flux observed by IceCube. Prompt neutrino emission from
GRBs is limited to 1% of the observed diffuse neutrino flux, and
emission on timescales up to s is constrained to 24% of the total
diffuse flux
Software for the frontiers of quantum chemistry:An overview of developments in the Q-Chem 5 package
This article summarizes technical advances contained in the fifth major release of the Q-Chem quantum chemistry program package, covering developments since 2015. A comprehensive library of exchangeâcorrelation functionals, along with a suite of correlated many-body methods, continues to be a hallmark of the Q-Chem software. The many-body methods include novel variants of both coupled-cluster and configuration-interaction approaches along with methods based on the algebraic diagrammatic construction and variational reduced density-matrix methods. Methods highlighted in Q-Chem 5 include a suite of tools for modeling core-level spectroscopy, methods for describing metastable resonances, methods for computing vibronic spectra, the nuclearâelectronic orbital method, and several different energy decomposition analysis techniques. High-performance capabilities including multithreaded parallelism and support for calculations on graphics processing units are described. Q-Chem boasts a community of well over 100 active academic developers, and the continuing evolution of the software is supported by an âopen teamwareâ model and an increasingly modular design
Anachronism, Agency, and the Contextualisation of Adat: Van Vollenhovenâs Analyses in Light of Struggles Over Resources
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Comparison of Proteomic Responses as Global Approach to Antibiotic Mechanism of Action Elucidation
New antibiotics are urgently needed to address the mounting resistance challenge. In early drug discovery, one of the bottlenecks is the elucidation of targets and mechanisms. To accelerate antibiotic research, we provide a proteomic approach for the rapid classification of compounds into those with precedented and unprecedented modes of action. We established a proteomic response library of Bacillus subtilis covering 91 antibiotics and comparator compounds, and a mathematical approach was developed to aid data analysis. Comparison of proteomic responses (CoPR) allows the rapid identification of antibiotics with dual mechanisms of action as shown for atypical tetracyclines. It also aids in generating hypotheses on mechanisms of action as presented for salvarsan (arsphenamine) and the antirheumatic agent auranofin, which is under consideration for repurposing. Proteomic profiling also provides insights into the impact of antibiotics on bacterial physiology through analysis of marker proteins indicative of the impairment of cellular processes and structures. As demonstrated for trans-translation, a promising target not yet exploited clinically, proteomic profiling supports chemical biology approaches to investigating bacterial physiology