Parameter estimation in pair hidden Markov models

This paper deals with parameter estimation in pair hidden Markov models (pair-HMMs). We first provide a rigorous formalism for these models and discuss possible definitions of likelihoods. The model being biologically motivated, some restrictions with respect to the full parameter space naturally occur. Existence of two different Information divergence rates is established and divergence property (namely positivity at values different from the true one) is shown under additional assumptions. This yields consistency for the parameter in parametrization schemes for which the divergence property holds. Simulations illustrate different cases which are not covered by our results.Comment: corrected typo

What did the students expect from TPU and what they have got: comparative study

Backlight units are the most relevant element in display with respect to the energy consumption. In addition, the quality of backlight units in terms of brightness, homogenous light distribution, and the angle of light radiation, dramatically influence the overall quality of a display. Within this paper a new approach for the production of complex micro optics on large surfaces is presented. The technology is being optimised within the FlexPAET project for the production of next generation backlight units which allow for more efficient display illumination

Expectation adjustment in the housing market: insights from the Scottish auction system

This paper examines price expectation adjustment of house buyers and sellers to rapid changes in the housing market using data from Scotland where houses are sold through 'first-price sealed-bid' auctions. These auctions provide more information on market signals, incentives and the behaviour of market participants than private treaty sales. This paper therefore provides a theoretical framework for analysing revealed preference data generated from these auctions. We specifically focus on the analysis of the selling to asking price difference, the 'bid-premium'. The bid-premium is shown to be affected by expectations of future price movements, market duration and high bidding frequency. The bid-premium reflects consumers' expectations, adapting to market conditions more promptly than asking price setting behaviour and final sale prices. The volatile conditions of the recent housing market bubble are fully reflected in the bid-premium, whereas the asking and sale prices are much less prone to rapid movements

Applications of ethylene vinyl acetate as an encapsulation material for terrestrial photovoltaic modules

Terrestrial photovoltaic modules must undergo substantial reductions in cost in order to become economically attractive as practical devices for large scale production of electricity. Part of the cost reductions must be realized by the encapsulation materials that are used to package, protect, and support the solar cells, electrical interconnects, and other ancillary components. As many of the encapsulation materials are polymeric, cost reductions necessitate the use of low cost polymers. The performance and status of ethylene vinyl acetate, a low cost polymer that is being investigated as an encapsulation material for terrestrial photovoltaic modules, are described

Stormy weather in 3C 196.1: nuclear outbursts and merger events shape the environment of the hybrid radio galaxy 3C 196.1

We present a multi-wavelength analysis based on archival radio, optical and X-ray data of the complex radio source 3C 196.1, whose host is the brightest cluster galaxy of a $z=0.198$ cluster. HST data show H$\alpha$+[N II] emission aligned with the jet 8.4 GHz radio emission. An H$\alpha$+[N II] filament coincides with the brightest X-ray emission, the northern hotspot. Analysis of the X-ray and radio images reveals cavities located at galactic- and cluster- scales. The galactic-scale cavity is almost devoid of 8.4 GHz radio emission and the south-western H$\alpha$+[N II] emission is bounded (in projection) by this cavity. The outer cavity is co-spatial with the peak of 147 MHz radio emission, and hence we interpret this depression in X-ray surface brightness as being caused by a buoyantly rising bubble originating from an AGN outburst $\sim$280 Myrs ago. A \textit{Chandra} snapshot observation allowed us to constrain the physical parameters of the cluster, which has a cool core with a low central temperature $\sim$2.8 keV, low central entropy index $\sim$13 keV cm$^2$ and a short cooling time of $\sim$500 Myr, which is $<0.05$ of the age of the Universe at this redshift. By fitting jumps in the X-ray density we found Mach numbers between 1.4 and 1.6, consistent with a shock origin. We also found compelling evidence of a past merger, indicated by a morphology reminiscent of gas sloshing in the X-ray residual image. Finally, we computed the pressures, enthalpies $E_{cav}$ and jet powers $P_{jet}$ associated with the cavities: $E_{cav}\sim7\times10^{58}$ erg, $P_{jet}\sim1.9\times10^{44}$ erg s$^{-1}$ for the inner cavity and $E_{cav}\sim3\times10^{60}$ erg, $P_{jet}\sim3.4\times10^{44}$ erg s$^{-1}$ for the outer cavity.Comment: 14 pages, 4 figures, ApJ accepte

Extended X-ray emission in radio galaxies: the peculiar case of 3C 305

Extended X-ray structures are common in Active Galactic Nuclei (AGNs). Here we present the first case of a Compact Steep Spectrum (CSS) radio galaxy, 3C 305, in which the X-ray radiation appears to be associated with the optical emission line region, dominated by the [O III]5007. On the basis of a morphological study, performed using the comparison between the X-rays, the optical and the radio band, we argue that the high energy emission has a thermal nature and it is not directly linked to the radio jet and hotspots of this source. Finally, we discuss the origin of the extended X-ray structure connected with the optical emission line region following two different interpretations: as due to the interaction between matter outflows and shock-heated environment gas, or as due to gas photoionized by nuclear emission.Comment: 5 pages, 2 figures, Accepted for publication in The ApJL Comments: references and affilitations correcte

Spatially resolved spectra of 3C galaxy nuclei

We present and discuss visible-wavelength long-slit spectra of four low redshift 3C galaxies obtained with the STIS instrument on the Hubble Space Telescope. The slit was aligned with near-nuclear jet-like structure seen in HST images of the galaxies, to give unprecedented spatial resolution of the galaxy inner regions. In 3C 135 and 3C 171, the spectra reveal clumpy emission line structures that indicate outward motions of a few hundred km s$^{-1}$ within a centrally illuminated and ionised biconical region. There may also be some low-ionisation high-velocity material associated with 3C 135. In 3C 264 and 3C 78, the jets have blue featureless spectra consistent with their proposed synchrotron origin. There is weak associated line emission in the innermost part of the jets with mild outflow velocity. These jets are bright and highly collimated only within a circumnuclear region of lower galaxy luminosity, which is not dusty. We discuss the origins of these central regions and their connection with relativistic jets.Comment: 15 pages incl Tables, 12 diagrams, To appear in A

Intraspecific diversity of the rhizodeposition of Lupinus angustifolius L. regarding the phosphorus mobilization in the soil

The cropping of lupines (Lupinus spp.) for protein production is rising worldwide. The growth of lupines is often limited by P deficiency, caused by low P bioavailability in soils. The rhizodeposition is a leading control of the P mobilization in the soil, i.e. especially by the release of phosphatases and organic acids. In the present study 20 genotypes of L. angustifolius (19 accessions from different geographic origins and the cultivar Boruta) were tested on their molecular-chemical composition of the rhizodeposition in P-deficiency by pyrolysis-field ionisation mass spectrometry (Py-FIMS) and on the phosphatase and ß-glucosidase activities in the rhizosphere soil. The intraspecific diversity of the composition of the rhizodeposits was especially large for the relative abundance of carbohydrates and in this way in a specific impact on the microbial activity in the rhizosphere by selective promotion under some genotypes by easily available C sources for the microbial rhizosphere community. This was confirmed by a large variation in the thermal stability of the rhizodeposits of different genotypes, a varying pH level in identical cultivation conditions and in varying activities of alkaline and acid phosphomonoesterases and ß-glucosidase in the rhizosphere. Furthermore, the data revealed a strong variation in the release of alkaloids into the rhizosphere during the growth with a further impact on the microbial activity. In conclusion, the use of the quality of the rhizodeposition as an indicator of the potential for P mobilization in P-deficient soils highlighted a broad intraspecific diversity within L. angustifolius. This is a promising basis for a selection of highly P efficient genotypes within this species for further breeding strategies of productive cultivars