1,280 research outputs found
A Lazy Approach for Supporting Nested Transactions
Transactional memory (TM) is a compelling alternative to traditional synchronization, and implementing TM primitives directly in hardware offers a potential performance advantage over software-based methods. In this paper, we demonstrate that many of the actions associated with transaction abort and commit may be performed lazily -- that is, incrementally, and on demand. This technique is ideal for hardware, since it requires little space or work; in addition, it can improve performance by sparing accesses to committing or aborting locations from having to stall until the commit or abort completes.
We further show that our lazy abort and commit technique supports open nesting and orElse, two language-level proposals which rely on transactional nesting. We also provide design notes for supporting lazy abort and commit on our own hardware TM system, based on VTM
Sensitive and Precise Quantification of Insulin-Like mRNA Expression in Caenorhabditis elegans
Insulin-like signaling regulates developmental arrest, stress resistance and lifespan in the nematode Caenorhabditis elegans. However, the genome encodes 40 insulin-like peptides, and the regulation and function of individual peptides is largely uncharacterized. We used the nCounter platform to measure mRNA expression of all 40 insulin-like peptides as well as the insulin-like receptor daf-2, its transcriptional effector daf-16, and the daf-16 target gene sod-3. We validated the platform using 53 RNA samples previously characterized by high density oligonucleotide microarray analysis. For this set of genes and the standard nCounter protocol, sensitivity and precision were comparable between the two platforms. We optimized conditions of the nCounter assay by varying the mass of total RNA used for hybridization, thereby increasing sensitivity up to 50-fold and reducing the median coefficient of variation as much as 4-fold. We used deletion mutants to demonstrate specificity of the assay, and we used optimized conditions to assay insulin-like gene expression throughout the C. elegans life cycle. We detected expression for nearly all insulin-like genes and find that they are expressed in a variety of distinct patterns suggesting complexity of regulation and specificity of function. We identified insulin-like genes that are specifically expressed during developmental arrest, larval development, adulthood and embryogenesis. These results demonstrate that the nCounter platform provides a powerful approach to analyzing insulin-like gene expression dynamics, and they suggest hypotheses about the function of individual insulin-like genes
Recommended from our members
New Clarification About Observation Billing May Improve Care for Behavioral Health Patients
Emergency Physicians provide ongoing care to psychiatric patients beyond the confines of a standard emergency room visit.Β Often, when we identify patients who need specialty psychiatric care, patients board in the emergency department awaiting acceptance and transfer to an outside facility.Β Even in cases where it has taken multiple days to complete the transfer, it has been unclear how to properly obtain reimbursement for this care.Β We discuss a new coding clarification that may provide a pathway to improve part of this situation
Sequential ranging: How it works
This publication is directed to the users of data from the Sequential Ranging Assembly (SRA), and to others who have a general interest in range measurements. It covers the hardware, the software, and the processes used in acquiring range data; it does not cover analytical aspects such as the theory of modulation, detection, noise spectral density, and other highly technical subjects. In other words, it covers how ranging is done, but not the details of why it works. The publication also includes an appendix that gives a brief discussion of PN ranging, a capability now under development
Features in the Primordial Spectrum from WMAP: A Wavelet Analysis
Precise measurements of the anisotropies in the cosmic microwave background
enable us to do an accurate study on the form of the primordial power spectrum
for a given set of cosmological parameters. In a previous paper (Shafieloo and
Souradeep 2004), we implemented an improved (error sensitive) Richardson-Lucy
deconvolution algorithm on the measured angular power spectrum from the first
year of WMAP data to determine the primordial power spectrum assuming a
concordance cosmological model. This recovered spectrum has a likelihood far
better than a scale invariant, or, `best fit' scale free spectra (\Delta ln L =
25 w.r.t. Harrison Zeldovich, and, \Delta ln L = 11 w.r.t. power law with
n_s=0.95). In this paper we use Discrete Wavelet Transform (DWT) to decompose
the local features of the recovered spectrum individually to study their effect
and significance on the recovered angular power spectrum and hence the
likelihood. We show that besides the infra-red cut off at the horizon scale,
the associated features of the primordial power spectrum around the horizon
have a significant effect on improving the likelihood. The strong features are
localised at the horizon scale.Comment: 8 pages, 4 figures, uses Revtex4, matches version accepted to Phys.
Rev. D, main results and conclusions unchanged, references adde
Clustering of the Diffuse Infrared Light from the COBE DIRBE maps. III. Power spectrum analysis and excess isotropic component of fluctuations
The cosmic infrared background (CIB) radiation is the cosmic repository for
energy release throughout the history of the universe. Using the all-sky data
from the COBE DIRBE instrument at wavelengths 1.25 - 100 mic we attempt to
measure the CIB fluctuations. In the near-IR, foreground emission is dominated
by small scale structure due to stars in the Galaxy. There we find a strong
correlation between the amplitude of the fluctuations and Galactic latitude
after removing bright foreground stars. Using data outside the Galactic plane
() and away from the center () we extrapolate
the amplitude of the fluctuations to cosec. We find a positive intercept
of nW/m2/sr at 1.25, 2.2,3.5 and 4.9 mic
respectively, where the errors are the range of 92% confidence limits. For
color subtracted maps between band 1 and 2 we find the isotropic part of the
fluctuations at nW/m2/sr. Based on detailed numerical and
analytic models, this residual is not likely to originate from the Galaxy, our
clipping algorithm, or instrumental noise. We demonstrate that the residuals
from the fit used in the extrapolation are distributed isotropically and
suggest that this extra variance may result from structure in the CIB. For
2\deg< \theta < 15^\deg, a power-spectrum analysis yields firm upper limits
of (\theta/5^\deg) \times\delta F_{\rm rms} (\theta) < 6, 2.5, 0.8, 0.5
nW/m2/sr at 1.25, 2.2, 3.5 and 4.9 mic respectively. From 10-100 mic, the upper
limits <1 nW/m2/sr.Comment: Ap.J., in press. 69 pages including 24 fig
Near-universal hospitalization of US emergency department patients with cancer and febrile neutropenia
IMPORTANCE:
Febrile neutropenia (FN) is the most common oncologic emergency and is among the most deadly. Guidelines recommend risk stratification and outpatient management of both pediatric and adult FN patients deemed to be at low risk of complications or mortality, but our prior single-center research demonstrated that the vast majority (95%) are hospitalized.
OBJECTIVE:
From a nationwide perspective, to determine the proportion of cancer patients of all ages hospitalized after an emergency department (ED) visit for FN, and to analyze variability in hospitalization rates. Our a priori hypothesis was that >90% of US cancer-associated ED FN visits would end in hospitalization.
DESIGN:
Analysis of data from the Nationwide Emergency Department Sample, 2006-2014.
SETTING:
Stratified probability sample of all US ED visits.
PARTICIPANTS:
Inclusion criteria were: (1) Clinical Classification Software code indicating cancer, (2) diagnostic code indicating fever, and (3) diagnostic code indicating neutropenia. We excluded visits ending in transfer.
EXPOSURE:
The hospital at which the visit took place.
MAIN OUTCOMES AND MEASURES:
Our main outcome is the proportion of ED FN visits ending in hospitalization, with an a priori hypothesis of >90%. Our secondary outcomes are: (a) hospitalization rates among subsets, and (b) proportion of variability in the hospitalization rate attributable to which hospital the patient visited, as measured by the intra-class correlation coefficient (ICC).
RESULTS:
Of 348,868 visits selected to be representative of all US ED visits, 94% ended in hospitalization (95% Confidence Interval [CI] 93-94%). Each additional decade of age conferred 1.23x increased odds of hospitalization. Those with private (92%), self-pay (92%), and other (93%) insurance were less likely to be hospitalized than those with public insurance (95%, odds ratios [OR] 0.74-0.76). Hospitalization was least likely at non-metropolitan hospitals (84%, OR 0.15 relative to metropolitan teaching hospitals), and was also less likely at metropolitan non-teaching hospitals (94%, OR 0.64 relative to metropolitan teaching hospitals). The ICC adjusted for hospital random effects and patient and hospital characteristics was 26% (95%CI 23-29%), indicating that 26% of the variability in hospitalization rate was attributable to which hospital the patient visited.
CONCLUSIONS AND RELEVANCE:
Nearly all cancer-associated ED FN visits in the US end in hospitalization. Inter-hospital variation in hospitalization practices explains 26% of the limited variability in hospitalization decisions. Simple, objective tools are needed to improve risk stratification for ED FN patients
- β¦