Rare missense variants in Tropomyosin-4 (TPM4) are associated with platelet dysfunction, cytoskeletal defects, and excessive bleeding

Background: A significant challenge is faced for the genetic diagnosis of inherited platelet disorders in which candidate genetic variants can be found in more than 100 bleeding, thrombotic, and platelet disorder genes, especially within families in which there are both normal and low platelet counts. Genetic variants of unknown clinical significance (VUS) are found in a significant proportion of such patients in which functional studies are required to prove pathogenicity. Objective: To identify the genetic cause in patients with a suspected platelet disorder and subsequently perform a detailed functional analysis of the candidate genetic variants found. Methods: Genetic and functional studies were undertaken in three patients in two unrelated families with a suspected platelet disorder and excessive bleeding. A targeted gene panel of previously known bleeding and platelet genes was used to identify plausible genetic variants. Deep platelet phenotyping was performed using platelet spreading analysis, transmission electron microscopy, immunofluorescence, and platelet function testing using lumiaggregometry and flow cytometry. Results: We report rare conserved missense variants (p.R182C and p.A183V) in TPM4 encoding tromomyosin-4 in 3 patients. Deep platelet phenotyping studies revealed similar platelet function defects across the 3 patients including reduced platelet secretion, and aggregation and spreading defects suggesting that TPM4 missense variants impact platelet function and show a disordered pattern of tropomyosin staining. Conclusions: Genetic and functional TPM4 defects are reported making TPM4 a diagnostic grade tier 1 gene and highlights the importance of including TPM4 in diagnostic genetic screening for patients with significant bleeding and undiagnosed platelet disorders, particularly for those with a normal platelet count

Salinity and Simulated Herbivory Influence Spartina alterniflora Traits and Defense Strategy

Sea level rise is expected to push saline waters into previously fresher regions of estuaries, and higher salinities may expose oligohaline marshes to invertebrate herbivores typically constrained by salinity. The smooth cordgrass, Spartina alterniflora (syn. Sporobolus alterniflorus), can defend itself against herbivores in polyhaline marshes, however it is not known if S. alterniflora’s defense varies along the mesohaline to oligohaline marsh gradient in estuaries. I found that S. alterniflora from a mesohaline marsh is better defended than plants from an oligohaline marsh, supporting the optimal defense theory. Higher salinity treatments lowered carbon content, C:N, and new stem biomass production, traits associated with a tolerance strategy, suggesting that salinity may mediate the defense response of S. alterniflora. Further, simulated herbivory increased the nitrogen content and decreased C:N of S. alterniflora. This indicates that grazing may increase S. alterniflora susceptibility to future herbivory via improved forage quality. Simulated herbivory also decreased both belowground and new stem biomass production, highlighting a potential pathway in which herbivory can indirectly facilitate marsh loss, as S. alterniflora biomass is critical for vertical accretion and marsh stability under future sea level rise scenarios

Optimal central-place foraging by beavers: Tree-size selection in relation to defensive chemicals of quaking aspen

At a newly occupied pond, beavers preferentially felled aspen smaller than 7.5 cm in diameter and selected against larger size classes. After one year of cutting, 10% of the aspen had been cut and 14% of the living aspen exhibited the juvenile growth form. A phenolic compound which may act as a deterrent to beavers was found in low concentrations in aspen bark, and there was no significant regression of relative concentration of this compound on tree diameter. At a pond which had been intermittently occupied by beavers for over 20 years, beavers selected against aspen smaller than 4.5 cm in diameter, and selected in favor of aspen larger than 19.5 cm in diameter. After more than 28 years of cutting at this site, 51% of the aspen had been cut and 49% of the living aspen were juvenileform. The phenolic compound was found in significantly higher concentrations in aspen bark than at the newly occupied site, and there was a significant negative regression of relative concentration on tree diameter. The results of this study show that responses to browsing by trees place constraints on the predictive value of standard energy-based optimal foraging models, and limitations on the use of such models. Future models should attempt to account for inducible responses of plants to damage and increases in concentrations of secondary metabolites through time.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/47775/1/442_2004_Article_BF00379963.pd

Complex windmill transformation producing new purely magnetic fluids

Minimal complex windmill transformations of G2IB(ii) spacetimes (admitting a two-dimensional Abelian group of motions of the so-called Wainwright B(ii) class) are defined and the compatibility with a purely magnetic Weyl tensor is investigated. It is shown that the transformed spacetimes cannot be perfect fluids or purely magnetic Einstein spaces. We then determine which purely magnetic perfect fluids (PMpfs) can be windmill-transformed into purely magnetic anisotropic fluids (PMafs). Assuming separation of variables, complete integration produces two, algebraically general, G2I-B(ii) PMpfs: a solution with zero 4-acceleration vector and spatial energy–density gradient, previously found by the authors, and a new solution in terms of Kummer's functions, where these vectors are aligned and non-zero. The associated windmill PMafs are rotating but non-expanding. Finally, an attempt to relate the spacetimes to each other by a simple procedure leads to a G2I-B(ii) one-parameter PMaf generalization of the previously found metric

Effects of trail gradient on leaf tissue transport and load size selection in leaf-cutter ants

Leaf-cutter ants in the genus Atta are frequent model organisms in studies of central-place foraging. Workers carry leaf fragments from the foraging site to the nest. Larger workers carry heavier loads, but it has been noted repeatedly that workers typically carry fragments lower in mass than appropriate to maximize leaf tissue transport. Here, we suggest and test a previously unconsidered explanation for this discrepancy. Previous calculations of rate-maximizing load sizes have been based on data from smooth, horizontal trails. However, foraging ants will in reality experience a variety of trail gradients, with implications for locomotion speeds of laden ants and consequently for rate-maximizing loads. In the field, we manipulated trail gradient for 389 laden Atta cephalotes workers and found that gradient had marked effects on leaf tissue transport rates, which were highest on downhill and horizontal gradients and considerably lower when ants carried loads uphill. In a captive colony where the whole length of the foraging trail was manipulated, ants apparently adjusted their loading ratios in response to gradient, carrying smaller loads relative to their mass on uphill gradients. Significantly higher loading ratios were recorded for ants carrying loads vertically downhill, perhaps because ants use gravity to reduce the energetic costs of carrying heavy loads. Our results suggest that optimal loads will differ markedly under differing trail conditions and that leaf-cutter ants show previously unsuspected plasticity in load size selection, allowing them to maintain foraging efficiency under a range of trail conditions. Copyright 2008, Oxford University Press.