Common Garden Comparisons of Native and Introduced Plant Populations: Latitudinal Clines Can Obscure Evolutionary Inferences

Common garden studies are increasingly used to identify differences in phenotypic traits between native and introduced genotypes, often ignoring sources of among-population variation within each range. We re-analyzed data from 32 common garden studies of 28 plant species that tested for rapid evolution associated with biological invasion. Our goals were: (i) to identify patterns of phenotypic trait variation among populations within native and introduced ranges, and (ii) to explore the consequences of this variation for how differences between the ranges are interpreted. We combined life history and physiologic traits into a single principal component (PCALL) and also compared subsets of traits related to size, reproduction, and defense (PCSIZE, PCREP, and PCDEF, respectively). On average, introduced populations exhibited increased growth and reproduction compared to native conspecifics when latitude was not included in statistical models. However, significant correlations between PC-scores and latitude were detected in both the native and introduced ranges, indicating population differentiation along latitudinal gradients. When latitude was explicitly incorporated into statistical models as a covariate, it reduced the magnitude and reversed the direction of the effect for PCALL and PCSIZE. These results indicate that unrecognized geographic clines in phenotypic traits can confound inferences about the causes of evolutionary change in invasive plants

Variation in sexual dimorphism in a wind-pollinated plant: The influence of geographical context and life-cycle dynamics

* Understanding the mechanisms causing phenotypic differences between females and males has long fascinated evolutionary biologists. An extensive literature exists on animal sexual dimorphism but less information is known about sex differences in plants, particularly the extent of geographical variation in sexual dimorphism and its life‐cycle dynamics. * Here, we investigated patterns of genetically based sexual dimorphism in vegetative and reproductive traits of a wind‐pollinated dioecious plant, Rumex hastatulus, across three life‐cycle stages using open‐pollinated families from 30 populations spanning the geographic range and chromosomal variation (XY and XY1Y2) of the species. * The direction and degree of sexual dimorphism was highly variable among populations and life‐cycle stages. Sex‐specific differences in reproductive function explained a significant amount of temporal change in sexual dimorphism. For several traits, geographical variation in sexual dimorphism was associated with bioclimatic parameters, likely due to the differential responses of the sexes to climate. We found no systematic differences in sexual dimorphism between chromosome races. * Sex‐specific trait differences in dioecious plants largely result from a balance between sexual and natural selection on resource allocation. Our results indicate that abiotic factors associated with geographical context also play a role in modifying sexual dimorphism during the plant life‐cycle

Whole-genome sequencing reveals host factors underlying critical COVID-19

Critical COVID-19 is caused by immune-mediated inflammatory lung injury. Host genetic variation influences the development of illness requiring critical care1 or hospitalization2,3,4 after infection with SARS-CoV-2. The GenOMICC (Genetics of Mortality in Critical Care) study enables the comparison of genomes from individuals who are critically ill with those of population controls to find underlying disease mechanisms. Here we use whole-genome sequencing in 7,491 critically ill individuals compared with 48,400 controls to discover and replicate 23 independent variants that significantly predispose to critical COVID-19. We identify 16 new independent associations, including variants within genes that are involved in interferon signalling (IL10RB and PLSCR1), leucocyte differentiation (BCL11A) and blood-type antigen secretor status (FUT2). Using transcriptome-wide association and colocalization to infer the effect of gene expression on disease severity, we find evidence that implicates multiple genes—including reduced expression of a membrane flippase (ATP11A), and increased expression of a mucin (MUC1)—in critical disease. Mendelian randomization provides evidence in support of causal roles for myeloid cell adhesion molecules (SELE, ICAM5 and CD209) and the coagulation factor F8, all of which are potentially druggable targets. Our results are broadly consistent with a multi-component model of COVID-19 pathophysiology, in which at least two distinct mechanisms can predispose to life-threatening disease: failure to control viral replication; or an enhanced tendency towards pulmonary inflammation and intravascular coagulation. We show that comparison between cases of critical illness and population controls is highly efficient for the detection of therapeutically relevant mechanisms of disease

Seed production of plants in screen houses

Raw and summary data for field experiment investigating male reproductive success in the presence or absence of pollinators for plants differing in stamen natural frequency

Measurements of stamen and floral traits

Data used in population comparison and repeatability measurements of stamen natural frequency

Data from: Divergent selection on the biomechanical properties of stamens under wind and insect pollination

Wind pollination has evolved from insect pollination in numerous angiosperm lineages and is associated with a characteristic syndrome of morphological traits. The traits initiating transitions to wind pollination and the ecological drivers involved are poorly understood. Here, we examine this problem in Thalictrum pubescens, an ambophilous (insect and wind pollination) species that probably represents a transitional state in the evolution of wind pollination in some taxa. We investigated wind-induced pollen release by forced harmonic motion by measuring stamen natural frequency (fn), a key vibration parameter, and its variability among nine populations. We assessed the repeatability of fn over consecutive growing seasons, the effect of this parameter on pollen release in a wind tunnel, and male reproductive success in the field using experimental manipulation of the presence or absence of pollinators. We found significant differences among populations and high repeatability within genotypes in fn. The wind tunnel assay revealed a strong negative correlation between fn and pollen release. Siring success was greatest for plants with lower fn when pollinators were absent; but this advantage diminished when pollinators were present. Our biomechanical analysis of the wind-flower interface has identified fn as a key trait for understanding early stages in the transition from insect to wind pollination

Wind tunnel assay of pollen release

Data for wind tunnel assay of pollen release from flowers differing in stamen natural frequency. Flowers were exposed to two wind speeds, high and low. File includes raw data for each trial, and summary data used to produce Figure 2

Sit-and-wait pollination in the spring flowering woodland plant, <i>Trillium grandiflorum</i>

In animal-pollinated plants, reproductive success is commonly limited by pollen availability, which can occur in environments where pollinator activity is scarce or variable. Extended floral longevity to maximize a plant’s access to pollinators may be an adaptation to such uncertain pollination environments. Here, we investigated the effects of flower exposure time to pollinators on female fertility (fruit and seed set) in the bee-pollinated woodland herb <i>Trillium grandiflorum</i>, a species with long-lived flowers (~17-21 d) that blooms in early spring when pollinator activity is often variable. We experimentally exposed flowers to pollinators for different amounts of time to determine the extent to which floral longevity influenced reproductive success. The amount of time that flowers were exposed to pollinators significantly increased fruit set and seed set per flower, but not seed set per fruit. Our results provide experimental evidence that long floral life spans may function as a ‘sit-and-wait’ pollination strategy to increase the amount of exposure time to pollinators and promote seed set in the unpredictable pollination environments often experienced by early spring ephemerals. In large populations with infrequent pollinator visitation, as commonly occurs in <i>T. grandiflorum</i>, pollination may be a largely stochastic process