Early Arrival of New World Species Enriching the Biological Assemblage of the Santi Quattro Coronati Complex (Rome, Italy)

This paper reports the archaeobotanical and archaeozoological data from a disposal pit, whose use started after the partial closure of a staircase, and from a mortar surface within a former porch in the Santi Quattro Coronati complex in Rome, Italy. The two contexts were in use in the Early Modern Age, when the complex served as a cardinal seat. The element that distinguishes the Santi Quattro Coronati from other contemporaneous contexts is the presence of New World species, until now only hypothesized based on a letter sent by the first resident bishop in Santo Domingo to Lorenzo Pucci, then cardinal with the titulus of the Santi Quattro Coronati. Pumpkin seeds (Cucurbita pepo and C. maxima/moschata) were found in the pit, while a pelvis of guinea pig (Cavia porcellus) was found in a former porch. Numerous archaeobotanical remains preserved by mummification, identified mostly as food, and many archaeozoological specimens were found in the pit. Based on the data, it is hypothesized that the pit was used mainly as a deposit for table waste. The results as a whole help towards the investigation of the eating customs and daily habits of a Renaissance high-status clerical community

Gut microbiota variations in wild yellow baboons (Papio cynocephalus) are associated with sex and habitat disturbance

Although male and female mammals differ in biological traits and functional needs, the contribution of this sexual dimorphism to variations in gut bacteria and fungi (gut microbiota) in relation to habitat type has not been fully examined. To understand whether the combination of sex and habitat affects gut microbiota variation, we analyzed 40 fecal samples of wild yellow baboons (Papio cynocephalus) living in contrasting habitat types (intact, well-protected vs. fragmented, less protected forests) in the Udzungwa Mountains of Tanzania. Sex determination was performed using the marker genes SRY (Sex-determining Region Y) and DDX3X-DDX3Y (DEAD-Box Helicase 3). Samples were attributed to 34 individuals (19 females and 15 males) belonging to five social groups. Combining the results of sex determination with two amplicon sequencing datasets on bacterial (V1-V3 region of the 16S rRNA gene) and fungal (ITS2) gut communities, we found that overall, baboon females had a significantly higher gut bacterial richness compared to males. Beta diversity estimates indicated that bacterial composition was significantly different between males and females, and this was true for individuals from both well- and less protected forests. Our results highlight the combined role of sex and habitat type in shaping variation in gut microbial communities in wild non-human primates

Gut microbial functions are impacted by habitat: implications for the conservation of non-human primates

We investigate the effect of forest fragmentation on gut microbiota functions and dietary adaptations of two non-human primate species in the Udzungwa Mountains of Tanzania using whole-genome shotgun sequencing. The Udzungwa red colobus (Procolobus gordonorum) is an endangered species with a restricted folivorous (leaf-eating) diet, while the yellow baboon (Papio cynocephalus) is a species of least concern with a highly diverse omnivorous diet. We identified several microbial pathways that were enriched or decreased in a fragmented forest patch compared to an intact forest, indicating functional adaptations of gut bacteria. The gut microbiota of the Udzungwa red colobus, in particular, shows a high sensitivity to habitat changes, which may be linked to its strictly folivorous feeding strategy. By contrast, the yellow baboon displays greater tolerance to habitat changes by showing a lower impact on their gut microbes, which is likely caused by its more varied diet. To investigate habitat-associated diet in detail, in an ongoing analysis, we aim to reconstruct dietary composition from the same shotgun sequencing samples. We will also present novel results showing the potential and the limits of identifying diet and host characteristics from faecal samples, and hence, the usefulness of this shotgun approach to conservation issues

Interactions between parasitic helminths and gut microbiota in wild tropical primates from intact and fragmented habitats

7openInternationalBothThe mammalian gastrointestinal tract harbours a highly complex ecosystem composed of a variety of micro- (bacteria, fungi, viruses, protozoans) and macro-organisms (helminths). Although most microbiota research focuses on the variation of single gut components, the crosstalk between components is still poorly characterized, especially in hosts living under natural conditions. We investigated the gut micro-biodiversity (bacteria, fungi and helminths) of 158 individuals of two wild non-human primates, the Udzungwa red colobus (Procolobus gordonorum) and the yellow baboon (Papio cynocephalus). These species have contrasting diets and lifestyles, but live sympatrically in both human-impacted and pristine forests in the Udzungwa Mountains of Tanzania. Using non-invasive faecal pellets, helminths were identified using standard microscopy while bacteria and fungi were characterized by sequencing the V1–V3 variable region of the 16S rRNA gene for bacteria and the ITS1–ITS2 fragment for fungi. Our results show that both diversity and composition of bacteria and fungi are associated with variation in helminth presence. Although interactions differed by habitat type, in both primates we found that Strongyloides was negatively associated and Trichuris was positively associated with bacterial and fungal richness. To our knowledge, this is one of the few studies demonstrating an interaction between helminth and gut microbiota communities in wild non-human primates.openBarelli, Claudia; Donati, Claudio; Albanese, Davide; Pafčo, Barbora; Modrý, David; Rovero, Francesco; Hauffe, Heidi C.Barelli, C.; Donati, C.; Albanese, D.; Pafčo, B.; Modrý, D.; Rovero, F.; Hauffe, H.C

Sex predicts gut microbiota variations in wild yellow baboons (Papio cynocephalus)

The role of gut microbiota diversity in animal ecology and conservation has become a key topic, especially since the contribution of these bacterial and fungal communities to host growth and health has been recently recognized. Most investigations in wildlife have focused on the study of extrinsic (e.g., diet, habitat) rather than intrinsic factors (e.g., sex, genetic background) affecting variation in animal gut communities. However, since male and female mammals often differ in biological traits and functional needs, sex is likely to play a major role in gut microbiota variation. Here, we evaluated if and how sex is associated with the gut microbiota richness and composition of wild yellow baboons (Papio cynocephalus) living in two habitat types, protected and unprotected forests of the Udzungwa Mountains in Tanzania. To understand whether sex and habitat type affect gut microbiota variation, we determined the sex of 34 yellow baboons (19 females and 15 males) from fecal pellets collected non-invasively using two marker genes (SRY and DDX3X). We then combined these results with amplicon sequencing datasets focusing on bacterial (V3-V4 region of the 16S rRNA gene) and fungal (ITS1-ITS2) communities of the same pellets. We found that females had gut microbiotas with a higher bacterial richness [Kruskal test; Shannon (alpha diversity): P = 0.010] and different composition [ANOVA; weighted Unifrac (beta diversity): P = 0.030] compared to males, in agreement with the strong morphological and behavioural dimorphisms shown between sexes of this species. Furthermore, forest type had a greater impact on females than males, such that the gut microbiotas of females from the two forests differed significantly in fungal composition [pairwise adonis test; Bray-Curtis: P = 0.02] and bacterial richness [pairwise Wilcoxon Rank Sum test; Shannon: P = 0.023], while those of males did not. These results indicated that the impact of habitat disturbance varied with sex, suggesting that intrinsic biological factors should be carefully considered when investigating wild animal biodiversity at any scale, and that such intraspecific variation could impact the outcome of conservation actions. However, research on the metabolic pathways, through shotgun sequencing, are encouraged to verify whether greater gut bacterial richness, such as those observed in baboon females, may translate into a greater diversity of metabolic functions

Elite food between the Late Middle Ages and Renaissance. Some case studies from Latium

The study of plant and animal remains from archaeological sites provides important evidence about past human diets and habits: this includes species selection, food preparation, consumption and disposal practices. Furthermore, such information may also provide inferences about social status. Data from refuse disposal features identified in some elite contexts in central Italy – a high-status residence in Celleno Vecchio (Viterbo) and the Baglioni-Santacroce castle in Graffignano (Viterbo), both in northern Latium, as well as the Santi Quattro Coronati ecclesiastical complex in Rome – allow to explore, using archaeobotanical, archaeozoological and genetic data, some of the different ways in which people expressed wealth by means of food during a period between the late Middle Ages and Renaissance

Determining Breast Implant Prevalence. A Population Study of Italian Chest Radiographs

Background Current breast implant prevalence within the general population remains elusive. An accurate prevalence is critical to serve as the denominator for any assessment of breast implant-related complication. The purpose of this manuscript is to assess this prevalence in women aged 20-70 years in Italy.Materials and Methods Eight reviewers, demonstrating a mean sensitivity of 87.0% and specificity of 97.0%, were recruited for retrospective identification of implants on chest radiographs from a tertiary academic hospital in a major urban setting. Three final reviewers were selected, and they assessed all eligible chest radiographs collected between January and December 2019. The hospital-based population was compared to epidemiological data at a local, regional and national level to demonstrate homogeneity of age structures using the phi correlation coefficient.Results We identified 3,448 chest X-rays which yielded 140 implants, with an overall prevalence of 4.1% for women aged 20-70. Implants were bilateral in 76% of cases and unilateral in 24%. They were placed cosmetically in 47.1% cases and used for reconstruction in 52.9% cases. Phi correlation coefficient found no differences across hospital-based, local, regional and national populations.Conclusion A validated method was performed to estimate implant prevalence from an academic hospital in a major urban setting at 4.1% and was used to estimate national prevalence in Italy. The implications of this epidemiologic study may reach across national borders for improved understanding of breast implant epidemiology and in predicting the total number of patients within a given population that may be affected by device complications

Calibrating occupancy to density estimations to assess abundance and vulnerability of a threatened primate in Tanzania

The current decline of mammals worldwide makes quantitative population assessments crucial, especially for range‐restricted and threatened species. However, robust abundance estimations are challenging for elusive or otherwise difficult to detect species. Alternative metrics requiring only presence/absence data, that is, occupancy, are possible but calibration with independent density estimates should be foreseen, although rarely performed. Here, we calibrated density estimates from acoustic surveys to occupancy estimates from camera‐trapping detections to derive the abundance of the endangered Sanje mangabey (Cercocebus sanjei) across its entire range in the Udzungwa Mountains of Tanzania. We found marked occupancy–density relationships for the two forest blocks where this primate occurs and used them to derive spatially explicit density estimates. Occupancy increased in montane forest zones at mid‐elevation but decreased slightly with proximity to forest borders. We predicted an average density (±SE) of 0.26 ± 0.05 groups/km2 in the national park and 0.24 ± 0.06 in the nature reserve. Accordingly, and given the much larger area of the reserve, the average predicted individual abundance was 1555 ± 325 and 2471 ± 571 in the national park and nature reserve, respectively. We found higher density and abundance in the nature reserve compared with previous studies. Given the past disturbance and poorer protection in the nature reserve relative to the national park, our results instill optimism for the status of the species, although occupancy analysis highlighted the potential vulnerability of this primate to human disturbance. Our approach appears valuable for spatially explicit density estimations of elusive species, and provides robust assessments of vulnerability and identification of priority areas for conservation of threatened populations

Sexual selection on male vocal fundamental frequency in humans and other anthropoids

D.A.P. was supported by a National Institutes of Mental Health T32 MH70343-05 fellowship. J.R.W. was supported by a National Science Foundation predoctoral fellowship.In many primates, including humans, the vocalizations of males and females differ dramatically, with male vocalizations and vocal anatomy often seeming to exaggerate apparent body size. These traits may be favoured by sexual selection because low-frequency male vocalizations intimidate rivals and/or attract females, but this hypothesis has not been systematically tested across primates, nor is it clear why competitors and potential mates should attend to vocalization frequencies. Here we show across anthropoids that sexual dimorphism in fundamental frequency (F0) increased during evolutionary transitions towards polygyny, and decreased during transitions towards monogamy. Surprisingly, humans exhibit greater F0 sexual dimorphism than any other ape. We also show that low-F0 vocalizations predict perceptions of men’s dominance and attractiveness, and predict hormone profiles (low cortisol and high testosterone) related to immune function. These results suggest that low male F0 signals condition to competitors and mates, and evolved in male anthropoids in response to the intensity of mating competition.PostprintPeer reviewe

Alimentação popular em São Paulo (1920 a 1950): políticas públicas, discursos técnicos e práticas profissionais

This article discusses how the concept of lower-class eating habits came about and developed in the intellectual circles of São Paulo during the first half of the 20th century. It starts by reconstructing the elements of the debate around the income and ignorance of the underprivileged as the main reasons behind their bad eating habits. Then, it looks at the focal points for interventions and public policies proposed by the government to deal with the problem thus identified, namely: training methods to produce sanitation counselors capable of offering dietary guidance as well; popular educational campaigns and new learning sites in addition to schools (e.g. healthcare centers and households); lunch and other means of offering food at schools; and diagnostic studies about food intake and eating habits among laborers. Because they were translated into technical and scientific language, the proposals and policies implemented in São Paulo left traces in a variety of supporting documents and media (photographs, primers, posters, inquiry notebooks, and academic literature).O artigo discute a construção da idéia de alimentação popular nos meios intelectuais em São Paulo, na primeira metade do século XX. Para isso, reconstitui, como motivos da má alimentação, elementos do debate em torno da renda e da ignorância dos mais pobres. Identificado o problema, as propostas de intervenção e as políticas públicas concentraram-se em alguns setores, abordados neste trabalho: métodos para a formação de educadores sanitários aptos a atuar também na educação alimentar; campanhas de instrução popular e criação de novos lugares de aprendizado (além das escolas, os centros de saúde e os lares); merenda escolar e outras alternativas de alimentação nas escolas; e diagnósticos referentes ao conteúdo e à forma da alimentação dos operários. Traduzidas em discurso técnico-científicos, as propostas e políticas implementadas na cidade deixaram indícios em documentação de suporte e tipologia variados (fotografias, cartilhas, cartazes, cadernetas de inquéritos e textos acadêmicos).Universidade Federal de São Paulo (UNIFESP)UNIFESPSciEL