3,186 research outputs found
Contrasting magnetic behavior of fine particles of some Kondo Lattices
We have investigated the magnetic behavior of ball-milled fine particles of
well-known Kondo lattices, CeAu2Si2, CePd2Si2 and CeAl2, by magnetization and
heat-capacity studies in order to understand the magnetic behavior when the
particle size is reduced. These compounds have been known to order
antiferromagnetically in the bulk form near (TN=) 10, 10 and 3.8 K
respectively. We find that the features due to magnetic ordering get suppressed
to temperatures below 1.8 K in the case of fine particles of ternary alloys,
though trivalence of Ce as inferred from the effective moment remains
unchanged. In contrast to this, in CeAl2, there appears to be a marginal
enhancement of TN, when the particle size is reduced to less than a micron.
These results can be consistently understood by proposing that there is
relatively more 4f-localization as the particle size is reduced, resulting in
weakening of exchange interaction strength
The HIV-1 late domain-2 S40A polymorphism in antiretroviral (or ART)-exposed individuals influences protease inhibitor susceptibility.
BackgroundThe p6 region of the HIV-1 structural precursor polyprotein, Gag, contains two motifs, P7TAP11 and L35YPLXSL41, designated as late (L) domain-1 and -2, respectively. These motifs bind the ESCRT-I factor Tsg101 and the ESCRT adaptor Alix, respectively, and are critical for efficient budding of virus particles from the plasma membrane. L domain-2 is thought to be functionally redundant to PTAP. To identify possible other functions of L domain-2, we examined this motif in dominant viruses that emerged in a group of 14 women who had detectable levels of HIV-1 in both plasma and genital tract despite a history of current or previous antiretroviral therapy.ResultsRemarkably, variants possessing mutations or rare polymorphisms in the highly conserved L domain-2 were identified in seven of these women. A mutation in a conserved residue (S40A) that does not reduce Gag interaction with Alix and therefore did not reduce budding efficiency was further investigated. This mutation causes a simultaneous change in the Pol reading frame but exhibits little deficiency in Gag processing and virion maturation. Whether introduced into the HIV-1 NL4-3 strain genome or a model protease (PR) precursor, S40A reduced production of mature PR. This same mutation also led to high level detection of two extended forms of PR that were fairly stable compared to the WT in the presence of IDV at various concentrations; one of the extended forms was effective in trans processing even at micromolar IDV.ConclusionsOur results indicate that L domain-2, considered redundant in vitro, can undergo mutations in vivo that significantly alter PR function. These may contribute fitness benefits in both the absence and presence of PR inhibitor
Large-Scale Release of Campylobacter Draft Genomes: Resources for Food Safety and Public Health from the 100K Pathogen Genome Project.
Campylobacter is a food-associated bacterium and a leading cause of foodborne illness worldwide, being associated with poultry in the food supply. This is the initial public release of 202 Campylobacter genome sequences as part of the 100K Pathogen Genome Project. These isolates represent global genomic diversity in the Campylobacter genus
Ozone Depletion from Nearby Supernovae
Estimates made in the 1970's indicated that a supernova occurring within tens
of parsecs of Earth could have significant effects on the ozone layer. Since
that time, improved tools for detailed modeling of atmospheric chemistry have
been developed to calculate ozone depletion, and advances have been made in
theoretical modeling of supernovae and of the resultant gamma-ray spectra. In
addition, one now has better knowledge of the occurrence rate of supernovae in
the galaxy, and of the spatial distribution of progenitors to core-collapse
supernovae. We report here the results of two-dimensional atmospheric model
calculations that take as input the spectral energy distribution of a
supernova, adopting various distances from Earth and various latitude impact
angles. In separate simulations we calculate the ozone depletion due to both
gamma-rays and cosmic rays. We find that for the combined ozone depletion
roughly to double the ``biologically active'' UV flux received at the surface
of the Earth, the supernova must occur at <8 pc. Based on the latest data, the
time-averaged galactic rate of core-collapse supernovae occurring within 8 pc
is ~1.5/Gyr. In comparing our calculated ozone depletions with those of
previous studies, we find them to be significantly less severe than found by
Ruderman (1974), and consistent with Whitten et al. (1976). In summary, given
the amplitude of the effect, the rate of nearby supernovae, and the ~Gyr time
scale for multicellular organisms on Earth, this particular pathway for mass
extinctions may be less important than previously thought.Comment: 24 pages, 4 Postscript figures, to appear in The Astrophysical
Journal, 2003 March 10, vol. 58
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Functional Analysis of a Novel Potassium Channel (KCNA1) Mutation in Hereditary Mokymia
Myokymia is characterized by spontaneous, involuntary muscle fiber group contraction visible as vermiform movement of the overlying skin. Myokymia with episodic ataxia is a rare, autosomal dominant trait caused by mutations in KCNA1, encoding a voltage-gated potassium channel. In the present study, we report a family with four members affected with myokymia. Additional clinical features included motor delay initially diagnosed as cerebral palsy, worsening with febrile illness, persistent extensor plantar reflex, and absence of epilepsy or episodic ataxia. Mutation analysis revealed a novel c.676C>A substitution in the potassium channel gene KCNA1, resulting in a T226K nonconservative missense mutation in the Kv1.1 subunit in all affected individuals. Electrophysiological studies of the mutant channel expressed in Xenopus oocytes indicated a loss of function. Co-expression of WT and mutant cRNAs significantly reduced whole-oocyte current compared to expression of WT Kv1.1 alone
Boolean delay equations on networks: An application to economic damage propagation
We introduce economic models based on Boolean Delay Equations: this formalism
makes easier to take into account the complexity of the interactions between
firms and is particularly appropriate for studying the propagation of an
initial damage due to a catastrophe. Here we concentrate on simple cases, which
allow to understand the effects of multiple concurrent production paths as well
as the presence of stochasticity in the path time lengths or in the network
structure.
In absence of flexibility, the shortening of production of a single firm in
an isolated network with multiple connections usually ends up by attaining a
finite fraction of the firms or the whole economy, whereas the interactions
with the outside allow a partial recovering of the activity, giving rise to
periodic solutions with waves of damage which propagate across the structure.
The damage propagation speed is strongly dependent upon the topology. The
existence of multiple concurrent production paths does not necessarily imply a
slowing down of the propagation, which can be as fast as the shortest path.Comment: Latex, 52 pages with 22 eps figure
Functional network topology in drug resistant and well-controlled idiopathic generalized epilepsy:a resting state functional MRI study
Despite an increasing number of drug treatment options for people with idiopathic generalized epilepsy (IGE), drug resistance remains a significant issue and the mechanisms underlying it remain poorly understood. Previous studies have largely focused on potential cellular or genetic explanations for drug resistance. However, epilepsy is understood to be a network disorder and there is a growing body of literature suggesting altered topology of large-scale resting networks in people with epilepsy compared with controls. We hypothesize that network alterations may also play a role in seizure control. The aim of this study was to compare resting state functional network structure between well-controlled IGE (WC-IGE), drug resistant IGE (DR-IGE) and healthy controls. Thirty-three participants with IGE (10 with WC-IGE and 23 with DR-IGE) and 34 controls were included. Resting state functional MRI networks were constructed using the Functional Connectivity Toolbox (CONN). Global graph theoretic network measures of average node strength (an equivalent measure to mean degree in a network that is fully connected), node strength distribution variance, characteristic path length, average clustering coefficient, small-world index and average betweenness centrality were computed. Graphs were constructed separately for positively weighted connections and for absolute values. Individual nodal values of strength and betweenness centrality were also measured and 'hub nodes' were compared between groups. Outcome measures were assessed across the three groups and between both groups with IGE and controls. The IGE group as a whole had a higher average node strength, characteristic path length and average betweenness centrality. There were no clear differences between groups according to seizure control. Outcome metrics were sensitive to whether negatively correlated connections were included in network construction. There were no clear differences in the location of 'hub nodes' between groups. The results suggest that, irrespective of seizure control, IGE interictal network topology is more regular and has a higher global connectivity compared to controls, with no alteration in hub node locations. These alterations may produce a resting state network that is more vulnerable to transitioning to the seizure state. It is possible that the lack of apparent influence of seizure control on network topology is limited by challenges in classifying drug response. It is also demonstrated that network topological features are influenced by the sign of connectivity weights and therefore future methodological work is warranted to account for anticorrelations in graph theoretic studies
Interleukin-23-Independent IL-17 Production Regulates Intestinal Epithelial Permeability
SummaryWhether interleukin-17A (IL-17A) has pathogenic and/or protective roles in the gut mucosa is controversial and few studies have analyzed specific cell populations for protective functions within the inflamed colonic tissue. Here we have provided evidence for IL-17A-dependent regulation of the tight junction protein occludin during epithelial injury that limits excessive permeability and maintains barrier integrity. Analysis of epithelial cells showed that in the absence of signaling via the IL-17 receptor adaptor protein Act-1, the protective effect of IL-17A was abrogated and inflammation was enhanced. We have demonstrated that after acute intestinal injury, IL-23R+ γδ T cells in the colonic lamina propria were the primary producers of early, gut-protective IL-17A, and this production of IL-17A was IL-23 independent, leaving protective IL-17 intact in the absence of IL-23. These results suggest that IL-17-producing γδ T cells are important for the maintenance and protection of epithelial barriers in the intestinal mucosa
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Genetically Determined Plasma Lipid Levels and Risk of Diabetic Retinopathy: A Mendelian Randomization Study.
Results from observational studies examining dyslipidemia as a risk factor for diabetic retinopathy (DR) have been inconsistent. We evaluated the causal relationship between plasma lipids and DR using a Mendelian randomization approach. We pooled genome-wide association studies summary statistics from 18 studies for two DR phenotypes: any DR (N = 2,969 case and 4,096 control subjects) and severe DR (N = 1,277 case and 3,980 control subjects). Previously identified lipid-associated single nucleotide polymorphisms served as instrumental variables. Meta-analysis to combine the Mendelian randomization estimates from different cohorts was conducted. There was no statistically significant change in odds ratios of having any DR or severe DR for any of the lipid fractions in the primary analysis that used single nucleotide polymorphisms that did not have a pleiotropic effect on another lipid fraction. Similarly, there was no significant association in the Caucasian and Chinese subgroup analyses. This study did not show evidence of a causal role of the four lipid fractions on DR. However, the study had limited power to detect odds ratios less than 1.23 per SD in genetically induced increase in plasma lipid levels, thus we cannot exclude that causal relationships with more modest effect sizes exist
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