a aparición de regularidades y variabilidad en ecosistemas marinos: el papel combinado de la física, la química y la biología

Marine ecosystems play an integral role in the functioning of life on earth. To predict how they will respond to global changes, and to effectively manage and maintain services upon which humans rely, we must understand how biological processes at the cellular level generate macroscopic patterns in the oceans. Here, we discuss how physics and biogeochemistry influence and constrain marine ecosystem structure and function, and outline key regularities and patterns of variability that models should aim to reproduce. We identify unanswered questions regarding how size-dependent physiological and ecological processes are linked to turbulent mixing, dealing specifically with how size structure is related to mixing over a range of spatial scales and how it is linked to the fate of primary production in the sea.Los ecosistemas marinos juegan un papel integral en el funcionamiento de la vida sobre la Tierra. Para predecir cómo van a responder a cambios globales y para mantener los servicios de los cuales los humanos dependemos, tenemos que comprender cómo los procesos biológicos a nivel celular generan patrones macroscópicos en el océano. Examinamos cómo la física y la biogeoquímica afectan y limitan la estructura y función de los ecosistemas marinos, y exponemos importantes regularidades y patrones de variabilidad que los modelos deberían reproducir. Identificamos aspectos sin resolver sobre la relación entre procesos fisiológicos y ecológicos y la mezcla turbulenta. En concreto, cómo la estructura de tamaños está relacionada con la mezcla en un rango de escalas espaciales y cómo está conectada con el destino de la producción primaria en el mar

Investigating microbial transformations of soil organic matter: synthesizing knowledge from disparate fields to guide new experimentation

Discerning why some soil organic matter (SOM) leaves soil profiles relatively quickly while other compounds, especially at depth, can be retained for decades to millennia is challenging for a multitude of reasons. Simultaneous with soil-specific advances, multiple other disciplines have enhanced their knowledge bases in ways potentially useful for future investigations of SOM decay. In this article, we highlight observations highly relevant for those investigating SOM decay and retention but often emanating from disparate fields and residing in literature seldom cited in SOM research. We focus on recent work in two key areas. First, we turn to experimental approaches using natural and artificial aquatic environments to investigate patterns of microbially mediated OM transformations as environmental conditions change, and highlight how aquatic microbial responses to environmental change can reveal processes likely important to OM decay and retention in soils. Second, we emphasize the importance of establishing intrinsic patterns of decay kinetics for purified substrates commonly found in soils to develop baseline rates. These decay kinetics – which represent the upper limit of the reaction rates – can then be compared to substrate decay kinetics observed in natural samples, which integrate intrinsic decay reaction rates and edaphic factors essential to the site under study but absent in purified systems. That comparison permits the site-specific factors to be parsed from the fundamental decay kinetics, an important advance in our understanding of SOM decay (and thus persistence) in natural systems. We then suggest ways in which empirical observations from aquatic systems and purified substrate–enzyme reaction kinetics can be used to advance recent theoretical efforts in SOM-focused research. Finally, we suggest how the observations in aquatic and purified substrate–enzyme systems could be used to help unravel the puzzles presented by oft-observed patterns of SOM characteristics with depth, as one example of the many perplexing SOM-related problems

The emergence of regularity and variability in marine ecosystems: the combined role of physics, chemistry and biology

Marine ecosystems play an integral role in the functioning of life on earth. To predict how they will respond to global changes, and to effectively manage and maintain services upon which humans rely, we must understand how biological processes at the cellular level generate macroscopic patterns in the oceans. Here, we discuss how physics and biogeochemistry influence and constrain marine ecosystem structure and function, and outline key regularities and patterns of variability that models should aim to reproduce. We identify unanswered questions regarding how size-dependent physiological and ecological processes are linked to turbulent mixing, dealing specifically with how size structure is related to mixing over a range of spatial scales and how it is linked to the fate of primary production in the sea

SoDaH: the SOils DAta Harmonization database, an open-source synthesis of soil data from research networks, version 1.0

Data collected from research networks present opportunities to test theories and develop models about factors responsible for the long-term persistence and vulnerability of soil organic matter (SOM). Synthesizing datasets collected by different research networks presents opportunities to expand the ecological gradients and scientific breadth of information available for inquiry. Synthesizing these data is challenging, especially considering the legacy of soil data that have already been collected and an expansion of new network science initiatives. To facilitate this effort, here we present the SOils DAta Harmonization database (SoDaH; https://lter.github.io/som-website, last access: 22 December 2020), a flexible database designed to harmonize diverse SOM datasets from multiple research networks. SoDaH is built on several network science efforts in the United States, but the tools built for SoDaH aim to provide an open-access resource to facilitate synthesis of soil carbon data. Moreover, SoDaH allows for individual locations to contribute results from experimental manipulations, repeated measurements from long-term studies, and local- to regional-scale gradients across ecosystems or landscapes. Finally, we also provide data visualization and analysis tools that can be used to query and analyze the aggregated database. The SoDaH v1.0 dataset is archived and available at https://doi.org/10.6073/pasta/9733f6b6d2ffd12bf126dc36a763e0b4 (Wieder et al., 2020)

On the deep minimum state in the Seyfert galaxy MCG-6-30-15

(abridged) We present a detailed spectral analysis of the first observation of the Seyfert 1 galaxy MCG-6-30-15 by the European Photon Imaging Camera on board the XMM-Newton observatory, together with contemporaneous data from the Proportional Counter Array on the Rossi X-ray Timing Explorer. Confirming our previously published result, we find that the presence of extremely broadened reflection features from an ionized relativistic accretion disk is required even when one employs the latest X-ray reflection models and includes the effect of complex absorption. The extremely broadened reflection features are also present if the primary continuum is modeled with a thermal Comptonisation spectrum rather than a simple power-law continuum. With this fact established, we examine these data using a relativistic smearing function corresponding to a ``generalized thin accretion disk'' model. We find strong evidence for torquing of the central parts of the accretion disk (presumably through magnetic interactions with the plunging region of the disk and/or the rotating black hole itself). We also perform a study of spectral variability within our observation. We find that the disk reflection features maintain roughly a constant equivalent width with respect to the observed continuum, as predicted by simple reflection models. Taken together with other studies of MCG-6-30-15 that find disk features to possess constant intensity at higher flux states, we suggest that the flux of disk features undergoes a saturation once the source emerges from a Deep Minimum state.Comment: 16 pages, accepted for publication in MNRA