451 research outputs found

    Do Movement Patterns of GPS-Tracked Cattle on Extensive Rangelands Suggest Independence among Individuals?

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    In behavioral studies, cattle within the same pasture are not considered as independent experimental units because of the potential confounding effects of the herd’s social interactions. However, evaluating cattle behavior on extensive rangelands is logistically challenging for researchers, and treating individual animals as independent experimental units may be beneficial for answering specific research questions. The objective of this study was to evaluate the association patterns among global positioning system (GPS)-tracked cattle at six different study sites in the western United States. A Half-Weight Index (HWI) association value was calculated for each pair of GPS-tracked cows (i.e., dyad) to determine the proportion of time that cattle were within 75 m and 500 m of each other. Cattle at two study sites exhibited relatively low mean HWI-association values (i.e., less than 0.23 HWI); whereas, cattle at other study sites tended to have greater mean HWI associations (i.e., greater than 0.35 HWI). Distinguishing features between study sites with low and high association values were the management of cattle prior to the study, herd size, pasture size, and the number of watering points. However, at all ranches except one, at least 75% of all dyadic associations had HWI values of less than 0.5 at 500 m, indicating that most of the GPS-tracked cows were greater than 500 m from each other for over 50% of tracking period. While interactions among cattle in the same pasture are often inevitable, our data suggests that under some situations, movement patterns of a sub-set of individual GPS-tracked cows may have levels of independence that are sufficient for analysis as individual experimental units. Understanding the level of independence among GPS-tracked cattle may provide options for analysis of grazing behavior for individual cattle within the same pasture

    Intimal smooth muscle cells are a source but not a sensor of anti-inflammatory CYP450 derived oxylipins

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    AbstractVascular pathologies are associated with changes in the presence and expression of morphologically distinct vascular smooth muscle cells. In particular, in complex human vascular lesions and models of disease in pigs and rodents, an intimal smooth muscle cell (iSMC) which exhibits a stable epithelioid or rhomboid phenotype in culture is often found to be present in high numbers, and may represent the reemergence of a distinct developmental vascular smooth muscle cell phenotype. The CYP450-oxylipin - soluble epoxide hydrolase (sEH) pathway is currently of great interest in targeting for cardiovascular disease. sEH inhibitors limit the development of hypertension, diabetes, atherosclerosis and aneurysm formation in animal models. We have investigated the expression of CYP450-oxylipin-sEH pathway enzymes and their metabolites in paired intimal (iSMC) and medial (mSMC) cells isolated from rat aorta. iSMC basally released significantly larger amounts of epoxy-oxylipin CYP450 products from eicosapentaenoic acid > docosahexaenoic acid > arachidonic acid > linoleic acid, and expressed higher levels of CYP2C12, CYP2B1, but not CYP2J mRNA compared to mSMC. When stimulated with the pro-inflammatory TLR4 ligand LPS, epoxy-oxylipin production did not change greatly in iSMC. In contrast, LPS induced epoxy-oxylipin products in mSMC and induced CYP2J4. iSMC and mSMC express sEH which metabolizes primary epoxy-oxylipins to their dihydroxy-counterparts. The sEH inhibitors TPPU or AUDA inhibited LPS-induced NFκB activation and iNOS induction in mSMC, but had no effect on NFκB nuclear localization or inducible nitric oxide synthase in iSMC; effects which were recapitulated in part by addition of authentic epoxy-oxylipins. iSMCs are a rich source but not a sensor of anti-inflammatory epoxy-oxylipins. Complex lesions that contain high levels of iSMCs may be more resistant to the protective effects of sEH inhibitors

    Cattle distribution under rotational grazing as affected by mineral mix supplements and traditional salt placement in Alpine environments

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    Manipulation of the Spatial Grazing Behaviour of Livestock in Extensive Grassland Systems

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    Spatial behaviour of livestock is a critical factor in grassland management. Recent and ongoing research suggests that new approaches can be used to manipulate where cattle graze. The combination of strategic supplement placement and low-stress herding can be used to target cattle grazing and potentially may be useful for managing fine fuels. A phenotype to genotype association study of cattle spatial behavior suggests that use of rugged terrain and areas far from water is inherited. Although more research is needed, selection for animals specifically adapted for mountainous terrain or extensive paddocks may be an alternative for managing grasslands in the near future

    Computing with confidence: a Bayesian approach

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    Bayes’ rule is introduced as a coherent strategy for multiple recomputations of classifier system output, and thus as a basis for assessing the uncertainty associated with a particular system results --- i.e. a basis for confidence in the accuracy of each computed result. We use a Markov-Chain Monte Carlo method for efficient selection of recomputations to approximate the computationally intractable elements of the Bayesian approach. The estimate of the confidence to be placed in any classification result provides a sound basis for rejection of some classification results. We present uncertainty envelopes as one way to derive these confidence estimates from the population of recomputed results. We show that a coarse SURE or UNSURE confidence rating based on a threshold of agreed classifications works well, not only pinpointing those results that are reliable but also in indicating input data problems, such as corrupted or incomplete data, or application of an inadequate classifier model

    Representing classifier confidence in the safety critical domain: an illustration from mortality prediction in trauma cases

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    Copyright © 2007 Springer Verlag. The final publication is available at link.springer.comThis work proposes a novel approach to assessing confidence measures for software classification systems in demanding applications such as those in the safety critical domain. Our focus is the Bayesian framework for developing a model-averaged probabilistic classifier implemented using Markov chain Monte Carlo (MCMC) and where appropriate its reversible jump variant (RJ-MCMC). Within this context we suggest a new technique, building on the reject region idea, to identify areas in feature space that are associated with "unsure" classification predictions. We term such areas "uncertainty envelopes" and they are defined in terms of the full characteristics of the posterior predictive density in different regions of the feature space. We argue this is more informative than use of a traditional reject region which considers only point estimates of predictive probabilities. Results from the method we propose are illustrated on synthetic data and also usefully applied to real life safety critical systems involving medical trauma data
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