Distribution modelling and statistical phylogeography: an integrative framework for generating and testing alternative biogeographical hypotheses

Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/73644/1/j.1365-2699.2007.01814.x.pd

Discovery of a morphologically and genetically distinct population of Black-tailed Godwits in the East Asian-Australasian Flyway

Occurring across Eurasia, the Black-tailed GodwitLimosa limosahas three recognized subspecies,melanuroides,limosaandislandicafrom east to west, respectively. With the smallest body size,melanuroideshas been considered the only subspecies in the East Asian-Australasian Flyway. Yet, observations along the Chinese coast indicated the presence of distinctively large individuals. Here we compared the morphometrics of these larger birds captured in northern Bohai Bay, China, with those of the three known subspecies and explore the genetic population structuring of Black-tailed Godwits based on the control region of the mitochondrial genome (mtDNA). We found that the Bohai Godwits were indeed significantly larger thanmelanuroides, resemblinglimosamore thanislandica, but with relatively longer bills thanislandica. The level of genetic differentiation between Bohai Godwits and the three recognized subspecies was of similar magnitude to the differentiation among previously recognized subspecies. Based on these segregating morphological and genetic characteristics, we propose that these birds belong to a distinct population, which may be treated and described as a new subspecies

The use and limits of ITS data in the analysis of intraspecific variation in Passiflora L. (Passifloraceae)

The discovery and characterization of informative intraspecific genetic markers is fundamental for evolutionary and conservation genetics studies. Here, we used nuclear ribosomal ITS sequences to access intraspecific genetic diversity in 23 species of the genus Passiflora L. Some degree of variation was detected in 21 of these. The Passiflora and Decaloba (DC.) Rchb. subgenera showed significant differences in the sizes of the two ITS regions and in GC content, which can be related to reproductive characteristics of species in these subgenera. Furthermore, clear geographical patterns in the spatial distribution of sequence types were identified in six species. The results indicate that ITS may be a useful tool for the evaluation of intraspecific genetic variation in Passiflora

Genetic divergence in mitochondrial DNA of Anopheles nuneztovari (Diptera: Culicidae) from Brazil and Colombia

In the present study, we have examined the variability in Anopheles nuneztovari mitochondrial DNA of three populations from the Brazilian Amazon and one from western Colombia (Sitronela), using four restriction endonucleases (BclI, ClaI, HindIII, SstI). The haplotype diversity (h) was slightly elevated in all populations (0.5000 to 0.6765), whereas the nucleotide diversity (π) was lower in the Sitronela population (0.0029) and higher in populations from the Brazilian Amazon (0.0056 to 0.0098). The degree of sequence divergence (δ) estimated within the Brazilian Amazon and that in Sitronela (0.0329 to 0.0371) suggests that these geographic populations of A. nuneztovari may eventually constitute separate species. The low sequence divergence values among the three Brazilian Amazon populations (0.0012 to 0.0031) indicate that these populations are genetically similar. These results are consistent with those recently reported for allozymes of these same populations

Is the western population of the European mink, (Mustela lutreola), a distinct Management Unit for conservation?

The European mink (Mustela lutreola) is one of the most threatened carnivores in Europe, with fragmented populations in Belarus. Russia and Romania, as well in south-western France and northern Spain. Many populations have become extinct recently, or are declining. We investigated mitochondrial DNA variation, using the complete D-loop region, and concentrating oil the west European population. The aim was two-fold: to use the genetic information to advise on the conservation of European mink, and to begin to understand their history through the Pleistocene. Captive breeding and re-introduction programmes are underway, so it is particularly vital to know whether the West European population should be treated separately. We find that European mink probably colonised from a single refugium after the last glaciation. West European populations may be fixed for a single haplotype. also suggesting a common origin. Despite this evidence for gene flow, following the precautionary principle we suggest that mink from the three geographically separate populations (Romania, Eastern and Western Europe) should be managed separately, for the moment. (C) 2003 Elsevier Ltd. All rights reserved