Systematic palynology in Ebenaceae with focus on Ebenoideae: Morphological diversity and character evolution

This study examines the diversity and character transformations in pollen and orbicule morphology of Ebenaceae, with a focus on subfamily Ebenoideae (ca. 600 sp.). 62 specimens comprising all three genera of Ebenoideae (Diospyos, Euclea, Royena), were studied using LM and SEM. Bayesian phylogenetic analysis was performed on molecular sequence data to establish an evolutionary hypothesis that was then used as an evolutionary framework to identify synapomorphies and trace evolutionary trends of palynological data with Bayesian posterior mapping and principle component analyses (PCA). Ebenoideae pollen is generally shed as monads (permanent tetrads in two species), medium-sized, prolate-spheroidal to subprolate and tricolporate. A substantial amount of variation is found in pollen size, equatorial outline (lobate, subtriangular, circular and hexagonal) and sexine ornamentation type ((micro)rugulate, striate, granulate and gemmate). Moreover, orbicules were present on the inner locule wall in all specimens examined. Their abundance, degree of fusion with tapetal membrane and aggregation vary considerably. We can conclude that Ebenaceae pollen is more heterogeneous than previously assumed. We traced palynological synapomorphies for groups at different taxonomic levels: subfamily level (pollen size, pollen wall stratification and aperture morphology), generic level (size, equatorial outline and sexine ornamentation types) and subgeneric clades (size, ectocolpus morphology, equatorial outline and sexine ornamentation subtypes) respectively. The granular infratectum and the unique sculpturing pattern on the orbicule walls are the most discriminating pollen features for subfamily Ebenoideae. (c) 2008 Elsevier B.V. All rights reserved.status: publishe

Pistillata-Duplications as a Mode for Floral Diversification in (Basal) Asterids

Basal asterid families, and to a lesser extent the asterids as a whole, are characterized by a high variation in petal and stamen morphology. Moreover, the Stamen number, the adnation of stamens to petals, and the degree of sympetaly vary considerably among basal asterid taxa. The B group genes, members of the APETALA3 (AP3) and PISTILLATA (PI) gene lineages, have been shown to specify petal and stamen identities in several core eudicot species. Duplicate genes in these lineages have been shown in some cases to have diversified in their function; for instance in Petunia, a PI paralog is required for the fusion of stamens to the corolla tube, illustrating that such genes belonging to this lineage are not just involved in specifying the identity of the stamens and petals but can also specify novel floral morphologies. This motivated us to study the duplication history of class B genes throughout asterid lineages, which comprise approximately one-third of all flowering plants. The evolutionary history of the PI gene subfamily indicates that the two genes in Petunia result from an ancient duplication event, coinciding with the origin of core asterids. A second duplication event occurred before the speciation of basal asterid Ericales families. These mid other duplications in the PI lineage are not correlated with duplications in the AP3 lineage. To understand the molecular evolution of the Ericales PI genes after duplication, we have described their expression patterns using reverse transcription polymerase chain reaction and in situ hybridization, reconstructed how selection shaped their protein sequences and tested their protein interaction specificity with other class B proteins. We find that after duplication, PI paralogs have acquired multiple different expression patterns and negative selective pressure on their codons is relaxed, whereas substitutions in sites putatively involved in protein-protein interactions show positive selection, allowing for a change in the interaction behavior of the PI paralogs after duplication. Together, these observations suggest that the asterids have preferentially recruited PI duplicate genes to diverse and potentially novel roles in asterid flower development.status: publishe

Macrophages are metabolically heterogeneous within the tumor microenvironment.

Macrophages are often prominently present in the tumor microenvironment, where distinct macrophage populations can differentially affect tumor progression. Although metabolism influences macrophage function, studies on the metabolic characteristics of ex vivo tumor-associated macrophage (TAM) subsets are rather limited. Using transcriptomic and metabolic analyses, we now reveal that pro-inflammatory major histocompatibility complex (MHC)-II TAMs display a hampered tricarboxylic acid (TCA) cycle, while reparative MHC-II TAMs show higher oxidative and glycolytic metabolism. Although both TAM subsets rapidly exchange lactate in high-lactate conditions, only MHC-II TAMs use lactate as an additional carbon source. Accordingly, lactate supports the oxidative metabolism in MHC-II TAMs, while it decreases the metabolic activity of MHC-II TAMs. Lactate subtly affects the transcriptome of MHC-II TAMs, increases L-arginine metabolism, and enhances the T cell suppressive capacity of these TAMs. Overall, our data uncover the metabolic intricacies of distinct TAM subsets and identify lactate as a carbon source and metabolic and functional regulator of TAMs

Macrophages are metabolically heterogeneous within the tumor microenvironment

Macrophages are often prominently present in the tumor microenvironment, where distinct macrophage populations can differentially affect tumor progression. Although metabolism influences macrophage function, studies on the metabolic characteristics of ex vivo tumor-associated macrophage (TAM) subsets are rather limited. Using transcriptomic and metabolic analyses, we now reveal that pro-inflammatory major histocompatibility complex (MHC)-IIhi TAMs display a hampered tricarboxylic acid (TCA) cycle, while reparative MHC-IIlo TAMs show higher oxidative and glycolytic metabolism. Although both TAM subsets rapidly exchange lactate in high-lactate conditions, only MHC-IIlo TAMs use lactate as an additional carbon source. Accordingly, lactate supports the oxidative metabolism in MHC-IIlo TAMs, while it decreases the metabolic activity of MHC-IIhi TAMs. Lactate subtly affects the transcriptome of MHC-IIlo TAMs, increases L-arginine metabolism, and enhances the T cell suppressive capacity of these TAMs. Overall, our data uncover the metabolic intricacies of distinct TAM subsets and identify lactate as a carbon source and metabolic and functional regulator of TAMs