Photon Management on a Photonic Crystal Platform

A multilayered dielectric structure, namely a one dimensional photonic crystal (1DPC), is proposed as a suitable platform for photon management, due to the low absorption of the dielectric materials. When properly designed, a 1DPC can sustain surface electromagnetic modes called Bloch Surface Waves (BSWs). In this PhD Thesis it is shown how light coupled to BSW can be focused or guided by means of ultrathin polymeric refractive structures directly patterned on the surface. Moreover, by patterning the surface with surface relief gratings, far-field radiation can be efficiently coupled to the surface modes, thus providing an enhanced electromagnetic field at the truncation interface of the 1DPC. By shaping the grating in a circular symmetry, light can be in-plane focused into a sub-wavelength spot. The same structure can be used to re-shape the radiation pattern of dipolar emitters. It is shown that an emitter lying on the surface of the 1DPC couples to the photonic structure and the fluorescence radiated couple with the surface modes. The so called BSW-coupled fluorescence propagates along the surface with low losses and a well-defined wavevector. By means of surface diffraction gratings properly designed, fluorescence can be extracted along any direction, thus improving the fluorescence collection with no need of high numerical aperture optics or critical alignements. A novel method for evaluating the enhancement gained with such photonic structures on the extraction efficiency is proposed. Such method is capable of providing at the same time spatial resolution, angular resolution and spectral resolution. A biosensing experiment to detect small amounts of labeled proteins is provided, in order to show the sensing capabilities of the photonic structure

High-Q Fano resonances in diamond nanopillars

We report on the optical behaviour of a nanostructured diamond surface on a glass substrate. The numerical model reveals that a simple geometrical pattern sustains Fano-like resonances with a Q-factor as high as 3.5 · 105 that can be excited by plane waves impinging normally on the surface. We show that the geometrical parameters of the nanopillars affect both the resonant frequency and the line shape. The nanostructured surface can be straightforwardly used as a refractive index sensor with high sensitivity and linearity. Our findings show that diamond-based meta-surfaces are a valuable nanophotonic platform to control light propagation at the nanoscale, enabling large field enhancement within the nanoresonators that can foster both linear and nonlinear effects

Multipolar Analysis in Symmetrical Meta-Atoms Sustaining Fano Resonances

We present an optical metasurface with symmetrical individual elements sustaining Fano resonances with high Q-factors. This study combines plane-wave illumination and modal analysis to investigate the resonant behavior that results in a suppression of the forward scattering, and we investigate the role of the lattice constant on the excited multipoles and on the spectral position and Q-factor of the Fano resonances, revealing the nonlocal nature of the resonances. The results show that the intrinsic losses play a crucial role in modulating the resonance amplitude in specific conditions and that the optical behavior of the device is extremely sensitive to the pitch of the metasurface. The findings highlight the importance of near-neighbor interactions to achieve high Q resonances and offer an important tool for the design of spectrally tunable metasurfaces using simple geometries

Molecular mechanisms driving the microgels behaviour: a Raman spectroscopy and Dynamic Light Scattering study

Responsive microgels based on poly(N-isopropylacrylamide) (PNIPAM) exhibit peculiar behaviours due to the competition between the hydrophilic and hydrophobic interactions of the constituent networks. The interpenetration of poly-acrilic acid (PAAc), a pH-sensitive polymer, within the PNIPAM network, to form Interpenetrated Polymer Network (IPN) microgels, affects this delicate balance and the typical Volume-Phase Transition (VPT) leading to complex behaviours whose molecular nature is still completely unexplored. Here we investigate the molecular mechanism driving the VPT and its influence on particle aggregation for PNIPAM/PAAc IPN microgels by the joint use of Dynamic Light Scattering and Raman Spectroscopy. Our results highlight that PNIPAM hydrophobicity is enhanced by the interpenetration of PAAc promoting interparticle interactions, a crossover concentration is found above which aggregation phenomena become relevant. Moreover we find that, at variance with PNIPAM, for IPN microgels a double-step molecular mechanisms occurs upon crossing the VPT, the first involving the coil-to-globule transition typical of PNIPAM and the latter associated to PAAc steric hindrance.Comment: preprint versio

Endoscopic findings and psychometric abnormalities: what is the relationship in upper endoscopic outpatients?

Background. Psychological disorders are often associated with diseases of the upper digestive tract. Although emotions can influence gastrointestinal function in healthy individuals, psychological setting in upper gastrointestinal patients are unclear. We evaluate the psychological alterations prevalence in outpatients submitted to upper endoscopy. Materials and Methods. A total of 130 patients (50 males and 80 females; mean age 54±17 years) submitted to upper gastrointestinal endoscopy, were enrolled over the period May 2009 - September 2010. Subjects were asked to complete questionnaires before endoscopic examination. Alexithymia, anxiety, depression and coping style were assessed using the Toronto Alexithymia Scale, Spielberger Trait Anxiety Inventory, Beck Depression Inventory and Coping Inventory for Stressful Situations, respectively. Results. Coping impairment, Alexithymia, Anxiety and Depression were found respectively in 80.3%, 25.4%, 24.6% and 17.2%, often in association. Task-oriented, emotion-oriented and avoidance-oriented alterations were found in 41.8%, 40% and 30.6%, respectively. No correlations were demonstrated between diagnosis of upper gastrointestinal disease and psychometric results. Conclusions. In our study, a high prevalence of psychometric alterations in gastrointestinal outpatients was unconnected with endoscopic findings, especially considering coping style alterations. This aspect should be taken into account in patients management and a long-term follow-up should clarify a possible role of these factors in patients prognosis and compliance

Stochastic Gradient Descent-like relaxation is equivalent to Glauber dynamics in discrete optimization and inference problems

Is Stochastic Gradient Descent (SGD) substantially different from Glauber dynamics? This is a fundamental question at the time of understanding the most used training algorithm in the field of Machine Learning, but it received no answer until now. Here we show that in discrete optimization and inference problems, the dynamics of an SGD-like algorithm resemble very closely that of Metropolis Monte Carlo with a properly chosen temperature, which depends on the mini-batch size. This quantitative matching holds both at equilibrium and in the out-of-equilibrium regime, despite the two algorithms having fundamental differences (e.g.\ SGD does not satisfy detailed balance). Such equivalence allows us to use results about performances and limits of Monte Carlo algorithms to optimize the mini-batch size in the SGD-like algorithm and make it efficient at recovering the signal in hard inference problems.Comment: 14 pages, 5 figure

Hyperbolic Metamaterials via Hierarchical Block Copolymer Nanostructures

Hyperbolic metamaterials (HMMs) offer unconventional properties in the field of optics, enabling opportunities for confinement and propagation of light at the nanoscale. In‐plane orientation of the optical axis, in the direction coinciding with the anisotropy of the HMMs, is desirable for a variety of novel applications in nanophotonics and imaging. Here, a method for creating localized HMMs with in‐plane optical axis, based on block copolymer (BCP) blend instability, is introduced. The dewetting of BCP thin film over topographically defined substrates generates droplets composed of highly ordered lamellar nanostructures in hierarchical configuration. The hierarchical nanostructures represent a valuable platform for the subsequent pattern transfer into a Au/air HMM, exhibiting hyperbolic behavior in a broad wavelength range in the visible spectrum. A computed Purcell factor as high as 32 at 580 nm supports the strong reduction in the fluorescence lifetime of defects in nanodiamonds placed on top of the HMM

Time-course analysis of genome-wide gene expression data from hormone-responsive human breast cancer cells

<p>Abstract</p> <p>Background</p> <p>Microarray experiments enable simultaneous measurement of the expression levels of virtually all transcripts present in cells, thereby providing a ‘molecular picture’ of the cell state. On the other hand, the genomic responses to a pharmacological or hormonal stimulus are dynamic molecular processes, where time influences gene activity and expression. The potential use of the statistical analysis of microarray data in time series has not been fully exploited so far, due to the fact that only few methods are available which take into proper account temporal relationships between samples.</p> <p>Results</p> <p>We compared here four different methods to analyze data derived from a time course mRNA expression profiling experiment which consisted in the study of the effects of estrogen on hormone-responsive human breast cancer cells. Gene expression was monitored with the innovative Illumina BeadArray platform, which includes an average of 30-40 replicates for each probe sequence randomly distributed on the chip surface. We present and discuss the results obtained by applying to these datasets different statistical methods for serial gene expression analysis. The influence of the normalization algorithm applied on data and of different parameter or threshold choices for the selection of differentially expressed transcripts has also been evaluated. In most cases, the selection was found fairly robust with respect to changes in parameters and type of normalization. We then identified which genes showed an expression profile significantly affected by the hormonal treatment over time. The final list of differentially expressed genes underwent cluster analysis of functional type, to identify groups of genes with similar regulation dynamics.</p> <p>Conclusions</p> <p>Several methods for processing time series gene expression data are presented, including evaluation of benefits and drawbacks of the different methods applied. The resulting protocol for data analysis was applied to characterization of the gene expression changes induced by estrogen in human breast cancer ZR-75.1 cells over an entire cell cycle.</p

Evaluation of the Biodegradable Peripheral Igaki-Tamai Stent in the Treatment of De Novo Lesions in the Superficial Femoral Artery

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