Photon Distribution Function for Long-Distance Propagation of Partially Coherent Beams through the Turbulent Atmosphere

The photon density operator function is used to calculate light beam propagation through turbulent atmosphere. A kinetic equation for the photon distribution function is derived and solved using the method of characteristics. Optical wave correlations are described in terms of photon trajectories that depend on fluctuations of the refractive index. It is shown that both linear and quadratic disturbances produce sizable effects for long-distance propagation. The quadratic terms are shown to suppress the correlation of waves with different wave vectors. We examine the intensity fluctuations of partially coherent beams (beams whose initial spatial coherence is partially destroyed). Our calculations show that it is possible to significantly reduce the intensity fluctuations by using a partially coherent beam. The physical mechanism responsible for this pronounced reduction is similar to that of the Hanbury-Braun, Twiss effect.Comment: 28 pages, 4 figure

Manipulation of ultracold atoms in dressed adiabatic radio frequency potentials

We explore properties of atoms whose magnetic hyperfine sub-levels are coupled by an external magnetic radio frequency (rf) field. We perform a thorough theoretical analysis of this driven system and present a number of systematic approximations which eventually give rise to dressed adiabatic radio frequency potentials. The predictions of this analytical investigation are compared to numerically exact results obtained by a wave packet propagation. We outline the versatility and flexibility of this new class of potentials and demonstrate their potential use to build atom optical elements such as double-wells, interferometers and ringtraps. Moreover, we perform simulations of interference experiments carried out in rf induced double-well potentials. We discuss how the nature of the atom-field coupling mechanism gives rise to a decrease of the interference contrast

Herschel evidence for disk flattening or gas depletion in transitional disks

Transitional disks are protoplanetary disks characterized by reduced near- and mid-infrared emission with respect to full disks. This characteristic spectral energy distribution indicates the presence of an optically thin inner cavity within the dust disk believed to mark the disappearance of the primordial massive disk. We present new Herschel Space Observatory PACS spectra of [OI] 63 micron for 21 transitional disks. Our survey complements the larger Herschel GASPS program "Gas in Protoplanetary Systems" (Dent et al. 2013) by quadrupling the number of transitional disks observed with PACS at this wavelength. [OI] 63 micron traces material in the outer regions of the disk, beyond the inner cavity of most transitional disks. We find that transitional disks have [OI] 63 micron line luminosities two times fainter than their full disk counterparts. We self consistently determine various stellar properties (e.g. bolometric luminosity, FUV excess, etc.) and disk properties (e.g. disk dust mass, etc.) that could influence the [OI] 63 micron line luminosity and we find no correlations that can explain the lower [OI] 63 micron line luminosities in transitional disks. Using a grid of thermo-chemical protoplanetary disk models, we conclude that either transitional disks are less flared than full disks or they possess lower gas-to-dust ratios due to a depletion of gas mass. This result suggests that transitional disks are more evolved than their full disk counterparts, possibly even at large radii.Comment: Accepted for publication in ApJ; 52 pages, 16 figures, 8 table

Phosphorothioate Anti-sense Oligonucleotides: The Kinetics and Mechanism of the Generation of the Sulfurising Agent from Phenylacetyl Disulfide (PADS)

The synthesis of phosphorothioate oligonucleotides is often accomplished in the pharmaceutical industry by the sulfurisation of the nucleotide-phosphite using phenylacetyl disulfide (PADS) which has an optimal combination of properties. This is best achieved by an initial ‘ageing’ of PADS for 48 hrs in acetonitrile with 3-picoline to generate polysulfides. The initial base-catalysed degradation of PADS occurs by an E1cB-type elimination to generate a ketene and acyldisulfide anion. Proton abstraction to reversibly generate a carbanion is demonstrated by H/D exchange, the rate of which is greatly increased by electron-withdrawing substituents in the aromatic ring of PADS. The ketene can be trapped intramolecularly by an o-allyl group. The disulfide anion generated subsequently attacks unreacted PADS on sulfur to give polysulfides, the active sulfurising agent. The rate of degradation of PADS is decreased by less basic substituted pyridines and is only first order in PADS indicating that the rate-limiting step is formation of the disulfide anion from the carbanion

Laser-controlled fluorescence in two-level systems

The ability to modify the character of fluorescent emission by a laser-controlled, optically nonlinear process has recently been shown theoretically feasible, and several possible applications have already been identified. In operation, a pulse of off-resonant probe laser beam, of sufficient intensity, is applied to a system exhibiting fluorescence, during the interval of excited- state decay following the initial excitation. The result is a rate of decay that can be controllably modified, the associated changes in fluorescence behavior affording new, chemically specific information. In this paper, a two-level emission model is employed in the further analysis of this all-optical process; the results should prove especially relevant to the analysis and imaging of physical systems employing fluorescent markers, these ranging from quantum dots to green fluorescence protein. Expressions are presented for the laser-controlled fluorescence anisotropy exhibited by samples in which the fluorophores are randomly oriented. It is also shown that, in systems with suitably configured electronic levels and symmetry properties, fluorescence emission can be produced from energy levels that would normally decay nonradiatively. © 2010 American Chemical Society

Quantum carpet interferometry for trapped atomic Bose-Einstein condensates

We propose an ``interferometric'' scheme for Bose-Einstein condensates using near-field diffraction. The scheme is based on the phenomenon of intermode traces or quantum carpets; we show how it may be used in the detection of weak forces.Comment: 4 figures. Submitted to Phys. Rev.