The impact of spin temperature fluctuations on the 21-cm moments

This paper considers the impact of Lyman-alpha coupling and X-ray heating on the 21-cm brightness-temperature one-point statistics (as predicted by semi-numerical simulations). The X-ray production efficiency is varied over four orders of magnitude and the hardness of the X-ray spectrum is varied from that predicted for high-mass X-ray binaries, to the softer spectrum expected from the hot inter-stellar medium. We find peaks in the redshift evolution of both the variance and skewness associated with the efficiency of X-ray production. The amplitude of the variance is also sensitive to the hardness of the X-ray SED. We find that the relative timing of the coupling and heating phases can be inferred from the redshift extent of a plateau that connects a peak in the variance's evolution associated with Lyman-alpha coupling to the heating peak. Importantly, we find that late X-ray heating would seriously hamper our ability to constrain reionization with the variance. Late X-ray heating also qualitatively alters the evolution of the skewness, providing a clean way to constrain such models. If foregrounds can be removed, we find that LOFAR, MWA and PAPER could constrain reionization and late X-ray heating models with the variance. We find that HERA and SKA (phase 1) will be able to constrain both reionization and heating by measuring the variance using foreground-avoidance techniques. If foregrounds can be removed they will also be able to constrain the nature of Lyman-alpha coupling.Comment: 16 pages, 13 figure, 1 table. Accepted for publication in MNRA

Distinguishing models of reionization using future radio observations of 21-cm 1-point statistics

We explore the impact of reionization topology on 21-cm statistics. Four reionization models are presented which emulate large ionized bubbles around over-dense regions (21CMFAST/ global-inside- out), small ionized bubbles in over-dense regions (local-inside-out), large ionized bubbles around under-dense regions (global-outside-in) and small ionized bubbles around under-dense regions (local-outside-in). We show that first-generation instruments might struggle to distinguish global models using the shape of the power spectrum alone. All instruments considered are capable of breaking this degeneracy with the variance, which is higher in outside-in models. Global models can also be distinguished at small scales from a boost in the power spectrum from a positive correlation between the density and neutral-fraction fields in outside-in models. Negative skewness is found to be unique to inside-out models and we find that pre-SKA instruments could detect this feature in maps smoothed to reduce noise errors. The early, mid and late phases of reionization imprint signatures in the brightness-temperature moments, we examine their model dependence and find pre-SKA instruments capable of exploiting these timing constraints in smoothed maps. The dimensional skewness is introduced and is shown to have stronger signatures of the early and mid-phase timing if the inside-out scenario is correct.Comment: 18 pages, 13 figures, updated to agree with published versio

Reduction of nitric oxide emissions from a combustor

A turbojet combustor and method for controlling nitric oxide emissions by employing successive combustion zones is described. After combustion of an initial portion of the fuel in a primary combustion zone, the combustion products of the primary zone are combined with the remaining portion of fuel and additional plenum air and burned in a secondary combustion zone under conditions that result in low nitric oxide emissions. Low nitric oxide emissions are achieved by a novel turbojet combustor arrangement which provides flame stability by allowing stable combustion to be accompanied by low nitric oxide emissions resulting from controlled fuel-lean combustion (ignited by the emission products from the primary zone) in a secondary combustion zone at a lower combustion temperature resulting in low emission of nitric oxide

Autopilot? A reflexive review of the piloting process in qualitative e-research

Purpose: This paper examines an oft-neglected aspect of qualitative research practice – conducting a pilot – using the innovative approach of ‘e-research’ to generate both practical and methodological insights. Approach: Using the authors’ ‘e-research’ pilot as a reflexive case study, key methodological issues are critically reviewed. This review is set in a broader context of the qualitative methods literature in which piloting appears largely as an implicit practice. Using a new and emerging approach (‘e-research’) provides a prompt to review our ‘autopilot’ tendencies and offers a new lens for analysing research practice. Findings: We find that despite an initial focus on ‘practical’ aspects of data collection within our ‘e-research’, the pilot opened up a range of areas for further consideration. We review research ethics, collaborative research practices and data management issues specifically for e-research but also reflect more broadly on potential implications for piloting within other research designs. Practical implications: We aim to offer both practical and methodological insights for qualitative researchers, whatever their methodological orientation, so that they might develop approaches for piloting that are appropriate to their own research endeavours. More specifically, we offer tentative guidance to those venturing into the emerging area of ‘e-research’. Value: This paper offers insight into an oft-ignored aspect of qualitative research, whilst also engaging in emerging area of methodological interest

Immune Responses in Human Necatoriasis: Association between Interleukin-5 Responses and Resistance to Reinfection

Cytokine and proliferative responses to Necator americanus infection were measured in a treatment-reinfection study of infected subjects from an area of Papua New Guinea where N. americanus is highly endemic. Before treatment, most subjects produced detectable interleukin (IL)4 (97%), IL-5 (86%), and interferon (IFN)-γ(64%) in response to adult N. americanus antigen. Pretreatment IFN-γ responses were negatively associated with hookworm burden, decreasing by 18 pg/mL for each increase of 1000 eggs/gram (epg) (n = 75; P < .01). Mean IFN-γ responses increased significantly after anthelmintic treatment, from 166 to 322 pg/mL (n = 42; P < .01). The intensity of reinfection was significantly negatively correlated with pretreatment IL-5 responses, decreasing by 551 epg for each 100 pg/mL increase in production of IL-5 (n = 51; P < .01). These data indicate that there is a mixed cytokine response in necatoriasis, with worm burdenassociated suppression of IFN-γ responses to adult N. americanus antigen. Resistance to reinfection is associated with the parasite-specific IL-5 response

The Functional Consequences of Variation in Transcription Factor Binding

One goal of human genetics is to understand how the information for precise and dynamic gene expression programs is encoded in the genome. The interactions of transcription factors (TFs) with DNA regulatory elements clearly play an important role in determining gene expression outputs, yet the regulatory logic underlying functional transcription factor binding is poorly understood. Many studies have focused on characterizing the genomic locations of TF binding, yet it is unclear to what extent TF binding at any specific locus has functional consequences with respect to gene expression output. To evaluate the context of functional TF binding we knocked down 59 TFs and chromatin modifiers in one HapMap lymphoblastoid cell line. We then identified genes whose expression was affected by the knockdowns. We intersected the gene expression data with transcription factor binding data (based on ChIP-seq and DNase-seq) within 10 kb of the transcription start sites of expressed genes. This combination of data allowed us to infer functional TF binding. On average, 14.7% of genes bound by a factor were differentially expressed following the knockdown of that factor, suggesting that most interactions between TF and chromatin do not result in measurable changes in gene expression levels of putative target genes. We found that functional TF binding is enriched in regulatory elements that harbor a large number of TF binding sites, at sites with predicted higher binding affinity, and at sites that are enriched in genomic regions annotated as active enhancers.Comment: 30 pages, 6 figures (7 supplemental figures and 6 supplemental tables available upon request to [email protected]). Submitted to PLoS Genetic

An analytical model for bore-driven run-up

We use a hodograph transformation and a boundary integral method to derive a new analytical solution to the shallow-water equations describing bore-generated run-up on a plane beach. This analytical solution differs from the classical Shen-Meyer runup solution in giving significantly deeper and less asymmetric swash flows, and also by predicting the inception of a secondary bore in both the backwash and the uprush in long surf. We suggest that this solution provides a significantly improved model for flows including swash events and the run-up following breaking tsunamis

Demonstration of an inductively coupled ring trap for cold atoms

We report the first demonstration of an inductively coupled magnetic ring trap for cold atoms. A uniform, ac magnetic field is used to induce current in a copper ring, which creates an opposing magnetic field that is time-averaged to produce a smooth cylindrically symmetric ring trap of radius 5 mm. We use a laser-cooled atomic sample to characterize the loading efficiency and adiabaticity of the magnetic potential, achieving a vacuum-limited lifetime in the trap. This technique is suitable for creating scalable toroidal waveguides for applications in matter-wave interferometry, offering long interaction times and large enclosed areas