Maximum likelihood estimation for social network dynamics

A model for network panel data is discussed, based on the assumption that the observed data are discrete observations of a continuous-time Markov process on the space of all directed graphs on a given node set, in which changes in tie variables are independent conditional on the current graph. The model for tie changes is parametric and designed for applications to social network analysis, where the network dynamics can be interpreted as being generated by choices made by the social actors represented by the nodes of the graph. An algorithm for calculating the Maximum Likelihood estimator is presented, based on data augmentation and stochastic approximation. An application to an evolving friendship network is given and a small simulation study is presented which suggests that for small data sets the Maximum Likelihood estimator is more efficient than the earlier proposed Method of Moments estimator.Comment: Published in at http://dx.doi.org/10.1214/09-AOAS313 the Annals of Applied Statistics (http://www.imstat.org/aoas/) by the Institute of Mathematical Statistics (http://www.imstat.org

Genetic architecture of rainbow trout survival from egg to adult

Survival from birth to a reproductive adult is a challenge that only robust individuals resistant to a variety of mortality factors will overcome. To assess whether survival traits share genetic architecture throughout the life cycle, we estimated genetic correlations for survival within fingerling stage, and across egg, fingerling and grow-out stages in farmed rainbow trout. Genetic parameters of survival at three life cycle stages were estimated for 249 166 individuals originating from ten year classes of a pedigreed population. Despite being an important fitness component, survival traits harboured significant but modest amount of genetic variation (h2=0·07–0·27). Weak associations between survival during egg-fry and fingerling periods, between early and late fingerling periods (rG=0·30) and generally low genetic correlations between fingerling and grow-out survival (mean rG=0·06) suggested that life-stage specific survival traits are best regarded as separate traits. However, in the sub-set of data with detailed time of death records, positive genetic correlations between early and late fingerling survival (rG=0·89) showed that during certain years the best genotypes in the early period were also among the best in the late period. That survival across fingerling period can be genetically the same, trait was indicated also by only slightly higher heritability (h2=0·15) estimated with the survival analysis of time to death during fingerling period compared to the analysis treating fingerling survival as a binary character (h2=0·11). The results imply that (1) inherited resistance against unknown mortality factors exists, but (2) ranking of genotypes changes across life stages

Characterization of Alachlor and Atrazine Desorption from Soils

Herbicide desorption isotherms may be affected by the amount of nondesorbable herbicide present in soil. Nondesorbable alachlor (as determined after methanol extraction) generally increased on a Waukegan silt loam (Typic Hapludolls) and a Ves clay loam (Udic Haplustolls) during five 0.01 M CaCl₂ desorptions. Atrazine was totally extracted with methanol from the Waukegan soil after one desorption using 0.01 M CaCl₂. However, after five desorptions with 0.01 M CaCl₂ an average of 5.5 and 15.5% of the total recovered atrazine from two atrazine application rates was methanol nondesorbable from the Waukegan and Ves soils, respectively. Freundlich desorption isotherms adjusted for nondesorbable herbicide accounted for as much as 71% of the difference between adsorption and desorption isotherms. Only a portion of the hysteresis observed can be attributable to nondesorbable herbicide

Adsorption and Desorption of Atrazine, Hydroxyatrazine, and S-Glutathione Atrazine on Two Soils

Adsorption and desorption isotherms for atrazine and two metabolites, hydroxyatrazine (HA) and S-glutathione atrazine (GSHA), were determined by batch equilibration on Plano and Waukegan silt loam soils at two soil pH levels (Plano, 6.1 and 4.5; Waukegan, 6.1 and 4.0). Freundlich adsorption isotherms were not affected by soil type except for GSHA at pH 4.0 to 4.5. When averaged over both soils, the order of adsorption at pH 6.1 was atrazine (Kf = 3.7) \u3c GSHA (Kf = 7.3) \u3c\u3c HA (Kf = 25) and at pH 4.0–4.5 was atrazine (Kf = 6.1) \u3c\u3c HA (Kf = 58) ≤ GSHA (Kf: Plano = 35; Waukegan = 78). The average slope of the adsorption isotherms (1/nads) was 0.81. The slopes of all desorption isotherms (1/ndes) were less than their respective 1/nads, indicating hysteresis. Atrazine desorbed into soil solution (1/ndes \u3e 0.0). With the exception of GSHA which desorbed from the pH 6.1 Plano silt loam (1/ndes = 0.15), desorption of HA and GSHA from other treatments was negligible (1/ndes = 0.0). Consequently, leaching of HA and GSHA in these and similar soils is not likely, due to high adsorption and low desorption

The Upper Atmosphere of HD17156b

HD17156b is a newly-found transiting extrasolar giant planet (EGP) that orbits its G-type host star in a highly eccentric orbit (e~0.67) with an orbital semi-major axis of 0.16 AU. Its period, 21.2 Earth days, is the longest among the known transiting planets. The atmosphere of the planet undergoes a 27-fold variation in stellar irradiation during each orbit, making it an interesting subject for atmospheric modelling. We have used a three-dimensional model of the upper atmosphere and ionosphere for extrasolar gas giants in order to simulate the progress of HD17156b along its eccentric orbit. Here we present the results of these simulations and discuss the stability, circulation, and composition in its upper atmosphere. Contrary to the well-known transiting planet HD209458b, we find that the atmosphere of HD17156b is unlikely to escape hydrodynamically at any point along the orbit, even if the upper atmosphere is almost entirely composed of atomic hydrogen and H+, and infrared cooling by H3+ ions is negligible. The nature of the upper atmosphere is sensitive to to the composition of the thermosphere, and in particular to the mixing ratio of H2, as the availability of H2 regulates radiative cooling. In light of different simulations we make specific predictions about the thermosphere-ionosphere system of HD17156b that can potentially be verified by observations.Comment: 31 pages, 42 eps figure

Enhancement of bulk second-harmonic generation from silicon nitride films by material composition

We present a comprehensive tensorial characterization of second-harmonic generation from silicon nitride films with varying composition. The samples were fabricated using plasma-enhanced chemical vapor deposition, and the material composition was varied by the reactive gas mixture in the process. We found a six-fold enhancement between the lowest and highest second-order susceptibility, with the highest value of approximately 5 pm/V from the most silicon-rich sample. Moreover, the optical losses were found to be sufficiently small (below 6 dB/cm) for applications. The tensorial results show that all samples retain in-plane isotropy independent of silicon content, highlighting the controllability of the fabrication process.Comment: 4 pages, 3 figures, 2 tables; Re-submitted to Optics Letter

Vortex localization in rotating clouds of bosons and fermions

Finite quantal systems at high angular momenta may exhibit vortex formation and localization. These phenomena occur independent of the statistics of the repulsively interacting particles, which may be of bosonic or fermionic nature. We analyze the relation between vortex localization and formation of stable Wigner molecules at high angular momenta in the view of particle-hole duality.Trial wave functions for the vortex states and the corresponding fermion-boson relations are discussed.Comment: 12 pages, 12 figure