Multifaceted Faculty Network Design and Management: Practice and Experience Report

We report on our experience on multidimensional aspects of our faculty's network design and management, including some unique aspects such as campus-wide VLANs and ghosting, security and monitoring, switching and routing, and others. We outline a historical perspective on certain research, design, and development decisions and discuss the network topology, its scalability, and management in detail; the services our network provides, and its evolution. We overview the security aspects of the management as well as data management and automation and the use of the data by other members of the IT group in the faculty.Comment: 19 pages, 11 figures, TOC and index; a short version presented at C3S2E'11; v6: more proofreading, index, TOC, reference

Approaching invasive species in Madagascar

While a number of plants, animals, and insects in Madagascar have been called 'invasive', the topic of invasive species has until recently received less attention here than in other island contexts. Some species, often alien to Madagascar and introduced by humans, have expanded their range rapidly and have had both negative and positive effects on landscapes, on native biodiversity, and on livelihoods. Examples include the prickly pear (raketa), the silver wattle (mimosa), and, recently, the Asian common toad (radaka boka). Building on a conceptual approach to 'invasive species', this paper emphasizes the importance of inclusive and deliberative site- and population - specific management of invasive species. It analyses three separate concepts commonly used in definitions of invasion: the origin, behaviour, and effects of particular species. It places these concepts in their broader social and ecological context, with particular attention to local perspectives on invasive species. We illustrate these concepts with Malagasy examples and data. The examples demonstrate that while invasions can have dramatic consequences, there can be multiple, often competing, interests as well as site - specific biophysical, environmental, and cultural considerations that need to be taken into account when designing policy and management interventions. We conclude with a number of lessons learned. RESUME FRANCAIS Contrairement à la plupart des autres îles, et en dépit du qualificatif 'invasif' rattaché depuis longtemps à certaines espèces qui s'y sont naturalisées, les réflexions autour de l'approche des espèces invasives à Madagascar demeurent récentes. L'opuntia (Opuntia spp.) figure certes parmi les plus anciens exemples d'espèces traités dans la littérature sur les invasions biologiques. Mais ce n'est vraiment qu'avec le retentissement médiatique autour de la détection en 2011 de la présence du crapaud masqué (Duttaphrynus melanostictus) et la recherche d'une parade appropriée que s'est affirmée la nécessité de traiter cette question des espèces invasives en tant que telle. Une posture nativiste et uniforme qui ignorerait la spécificité des contextes biophysiques et socio - économiques locaux, mais aussi la pluralité des formes d'invasion biologique et des défi- nitions qui s'y rattachent, ne saurait être privilégiée. L'article montre qu'il s'agit de situer les réflexions dans un contexte insulaire socio - économique dans lequel les espèces allogènes tiennent depuis longtemps une large place. Il défend en outre la nécessité d'envisager les espèces invasives non pas selon une forme de perception unique et autoritariste, mais selon une diversité de points de vue, conforme aux conflits d'intérêts qui se manifestent parfois, et mettant plutôt en avant le caractère exogène des espèces invasives, leurs effets (négatifs, mais aussi positifs) sur le milieu, ou leur mode de fonctionnement (disper- sion, dominance) dans des contextes spécifiques et locaux. Il convient en particulier d'observer qu'aux coûts générés par les invasions biologiques peuvent s'ajouter des bénéfices économiques, et que les impacts écologiques néfastes peuvent se combiner avec des incidences heureuses, y compris auprès d'espèces indigènes en situation critique. En outre, le point de vue des populations humaines, leur connaissance d'espèces invasives quotidiennement rencontrées, leur réticence à scin- der le vivant en espèces indigènes et allogène, mais aussi leur vision pragmatique, ne sauraient être mésestimés, et moins encore oubliés. Enfin, l'article invite à prendre du recul face aux effets rhétoriques liés aux discours conventionnels sur les inva- sions biologiques, à éviter les amalgames et les généralisations excessives, à tenir compte des contraintes environnementales mais aussi des aspirations socio - économiques des populations locales, et à prendre en compte la diversité des spécificités locales, qu'elles soient biophysiques ou sociales. En conclusion, il est sans doute heureux que Madagascar n'ait rejoint que très récemment la mouvance internationale des réflexions sur les espèces invasives : cela lui permet en effet d'être en mesure de disposer d'une position équilibrée, déjouant certains discours catastrophistes, et préférant une approche résolument contextualisée, à l'échelle nationale comme aux échelles régionales

Effectiveness of traditional meditation retreats: A systematic review and meta-analysis

BACKGROUND: An increasing number of studies are investigating traditional meditation retreats. Very little, however, is known about their effectiveness. OBJECTIVE: To evaluate the effectiveness of meditation retreats on improving psychological outcomes in general population. DATA SOURCES: A systematic review of studies published in journals or as dissertations in PSYCINFO, PUBMED, CINAHL or Web of Science from the first available date until October 22, 2016. REVIEW METHODS: A total of 20 papers (21 studies, N = 2912) were included. RESULTS: Effect-size estimates of outcomes combined suggested that traditional meditation retreats are moderately effective in pre-post analyses (n = 19; Hedge's g = 0.45; 95% CI [0.35, 0.54], p < 0.00001) and in analyses comparing retreats to controls (n = 14; Hedge's g = 0.49; 95% CI [0.36, 0.61], p < 0.00001). Results were maintained at follow-up. No differences were observed between meditation styles. Results suggested large effects on measures of anxiety, depression and stress, and moderate effects on measures of emotional regulation and quality of life. As to potential mechanisms of actions, results showed large effects on measures of mindfulness and compassion, and moderate effects on measures of acceptance. In addition, changes in mindfulness levels strongly moderated clinical effect sizes. However, heterogeneity was significant among trials, probably due to differences in study designs, types and duration of the retreats and assessed outcomes, limiting therefore the implications of the results. CONCLUSION: Meditation retreats are moderately to largely effective in reducing depression, anxiety, stress and in ameliorating the quality of life of participants

Analysis of instability patterns in non-Boussinesq mixed convection using a direct numerical evaluation of disturbance integrals

The Fourier integrals representing linearised disturbances arising from an initially localised source are evaluated numerically for natural and mixed convection flows between two differentially heated plates. The corresponding spatio-temporal instability patterns are obtained for strongly non-Boussinesq high-temperature convection of air and are contrasted to their Boussinesq counterparts. A drastic change in disturbance evolution scenarios is found when a large cross-channel temperature gradient leads to an essentially nonlinear variation of the fluid's transport properties and density. In particular, it is shown that non-Boussinesq natural convection flows are convectively unstable while forced convection flows can be absolutely unstable. These scenarios are opposite to the ones detected in classical Boussinesq convection. It is found that the competition between two physically distinct instability mechanisms which are due to the action of the shear and the buoyancy are responsible for such a drastic change in spatio-temporal characteristics of instabilities. The obtained numerical results confirm and complement semi-analytical conclusions of Suslov 2007 on the absolute/convective instability transition in non-Boussinesq mixed convection. Generic features of the chosen numerical approach are discussed and its advantages and shortcomings are reported

Identification of Candidate Regulators of Embryonic Stem Cell Differentiation by Comparative Phosphoprotein Affinity Profiling

Embryonic stem cells are a unique cell population capable both of self-renewal and of differentiation into all tissues in the adult organism. Despite the central importance of these cells, little information is available regarding the intracellular signaling pathways that govern self-renewal or early steps in the differentiation program. Embryonic stem cell growth and differentiation correlates with kinase activities, but with the exception of the JAK/STAT3 pathway, the relevant substrates are unknown. To identify candidate phosphoproteins with potential relevance to embryonic stem cell differentiation, a systems biology approach was used. Proteins were purified using phosphoprotein affinity columns, then separated by two-dimensional gel electrophoresis, and detected by silver stain before being identified by tandem mass spectrometry. By comparing preparations from undifferentiated and differentiating mouse embryonic stem cells, a set of proteins was identified that exhibited altered post-translational modifications that correlated with differentiation state. Evidence for altered post-translational modification included altered gel mobility, altered recovery after affinity purification, and direct mass spectra evidence. Affymetrix microarray analysis indicated that gene expression levels of these same proteins had minimal variability over the same differentiation period. Bioinformatic annotations indicated that this set of proteins is enriched with chromatin remodeling, catabolic, and chaperone functions. This set of candidate phosphoprotein regulators of stem cell differentiation includes products of genes previously noted to be enriched in embryonic stem cells at the mRNA expression level as well as proteins not associated previously with stem cell differentiation status

Gallot-Tanno Theorem for closed incomplete pseudo-Riemannian manifolds and applications

We extend the Gallot-Tanno Theorem to closed pseudo-Riemannian manifolds. It is done by showing that if the cone over a manifold admits a parallel symmetric $(0,2)-$tensor then it is Riemannian. Applications of this result to the existence of metrics with distinct Levi-Civita connections but having the same unparametrized geodesics and to the projective Obata conjecture are given. We also apply our result to show that the holonomy group of a closed $(O(p+1,q),S^{p,q})$-manifold does not preserve any nondegenerate splitting of $\R^{p+1,q}$.Comment: minor correction

Fitness Cost of Resistance to Bt Cotton Linked with Increased Gossypol Content in Pink Bollworm Larvae

Fitness costs of resistance to Bacillus thuringiensis (Bt) crops occur in the absence of Bt toxins, when individuals with resistance alleles are less fit than individuals without resistance alleles. As costs of Bt resistance are common, refuges of non-Bt host plants can delay resistance not only by providing susceptible individuals to mate with resistant individuals, but also by selecting against resistance. Because costs typically vary across host plants, refuges with host plants that magnify costs or make them less recessive could enhance resistance management. Limited understanding of the physiological mechanisms causing fitness costs, however, hampers attempts to increase costs. In several major cotton pests including pink bollworm (Pectinophora gossypiella), resistance to Cry1Ac cotton is associated with mutations altering cadherin proteins that bind this toxin in susceptible larvae. Here we report that the concentration of gossypol, a cotton defensive chemical, was higher in pink bollworm larvae with cadherin resistance alleles than in larvae lacking such alleles. Adding gossypol to the larval diet decreased larval weight and survival, and increased the fitness cost affecting larval growth, but not survival. Across cadherin genotypes, the cost affecting larval growth increased as the gossypol concentration of larvae increased. These results suggest that increased accumulation of plant defensive chemicals may contribute to fitness costs associated with resistance to Bt toxins

Biological validation of coenzyme Q redox state by HPLC-EC measurement: relationship between coenzyme Q redox state and coenzyme Q content in rat tissues

AbstractThe properties of coenzymes Q (CoQ9 and CoQ10) are closely linked to their redox state (CoQox/total CoQ)×100. In this work, CoQ redox state was biologically validated by high performance liquid chromatography-electrochemical measurement after modulation of mitochondrial electron flow of cultured cells by molecules increasing (rotenone, carbonyl cyanide chlorophenylhydrazone) or decreasing (antimycin) CoQ oxidation. The tissue specificity of CoQ redox state and content were investigated in control and hypoxic rats. In control rats, there was a strong negative linear regression between tissular CoQ redox state and CoQ content. Hypoxia increased CoQ9 redox state and decreased CoQ9 content in a negative linear relationship in the different tissues, except the heart and lung. This result demonstrates that, under conditions of mitochondrial impairment, CoQ redox control is tissue-specific