22 research outputs found

    Wrestling Model of the Repertoire of Activity Propagation Modes in Quadruple Neural Networks

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    The spontaneous activity of engineered quadruple cultured neural networks (of four-coupled sub-networks) exhibits a repertoire of different types of mutual synchronization events. Each event corresponds to a specific activity propagation mode (APM) defined by the order of activity propagation between the sub-networks. We statistically characterized the frequency of spontaneous appearance of the different types of APMs. The relative frequencies of the APMs were then examined for their power-law properties. We found that the frequencies of appearance of the leading (most frequent) APMs have close to constant algebraic ratio reminiscent of Zipf's scaling of words. We show that the observations are consistent with a simplified “wrestling” model. This model represents an extension of the “boxing arena” model which was previously proposed to describe the ratio between the two activity modes in two coupled sub-networks. The additional new element in the “wrestling” model presented here is that the firing within each network is modeled by a time interval generator with similar intra-network Lévy distribution. We modeled the different burst-initiation zones’ interaction by competition between the stochastic generators with Gaussian inter-network variability. Estimation of the model parameters revealed similarity across different cultures while the inter-burst-interval of the cultures was similar across different APMs as numerical simulation of the model predicts

    Statistical Analysis of Multi-Cell Recordings: Linking Population Coding Models to Experimental Data

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    Modern recording techniques such as multi-electrode arrays and two-photon imaging methods are capable of simultaneously monitoring the activity of large neuronal ensembles at single cell resolution. These methods finally give us the means to address some of the most crucial questions in systems neuroscience: what are the dynamics of neural population activity? How do populations of neurons perform computations? What is the functional organization of neural ensembles? While the wealth of new experimental data generated by these techniques provides exciting opportunities to test ideas about how neural ensembles operate, it also provides major challenges: multi-cell recordings necessarily yield data which is high-dimensional in nature. Understanding this kind of data requires powerful statistical techniques for capturing the structure of the neural population responses, as well as their relationship with external stimuli or behavioral observations. Furthermore, linking recorded neural population activity to the predictions of theoretical models of population coding has turned out not to be straightforward. These challenges motivated us to organize a workshop at the 2009 Computational Neuroscience Meeting in Berlin to discuss these issues. In order to collect some of the recent progress in this field, and to foster discussion on the most important directions and most pressing questions, we issued a call for papers for this Research Topic. We asked authors to address the following four questions: 1. What classes of statistical methods are most useful for modeling population activity? 2. What are the main limitations of current approaches, and what can be done to overcome them? 3. How can statistical methods be used to empirically test existing models of (probabilistic) population coding? 4. What role can statistical methods play in formulating novel hypotheses about the principles of information processing in neural populations? A total of 15 papers addressing questions related to these themes are now collected in this Research Topic. Three of these articles have resulted in “Focused reviews” in Frontiers in Neuroscience (Crumiller et al., 2011; Rosenbaum et al., 2011; Tchumatchenko et al., 2011), illustrating the great interest in the topic. Many of the articles are devoted to a better understanding of how correlations arise in neural circuits, and how they can be detected, modeled, and interpreted. For example, by modeling how pairwise correlations are transformed by spiking non-linearities in simple neural circuits, Tchumatchenko et al. (2010) show that pairwise correlation coefficients have to be interpreted with care, since their magnitude can depend strongly on the temporal statistics of their input-correlations. In a similar spirit, Rosenbaum et al. (2010) study how correlations can arise and accumulate in feed-forward circuits as a result of pooling of correlated inputs. Lyamzin et al. (2010) and Krumin et al. (2010) present methods for simulating correlated population activity and extend previous work to more general settings. The method of Lyamzin et al. (2010) allows one to generate synthetic spike trains which match commonly reported statistical properties, such as time varying firing rates as well signal and noise correlations. The Hawkes framework presented by Krumin et al. (2010) allows one to fit models of recurrent population activity to the correlation-structure of experimental data. Louis et al. (2010) present a novel method for generating surrogate spike trains which can be useful when trying to assess the significance and time-scale of correlations in neural spike trains. Finally, Pipa and Munk (2011) study spike synchronization in prefrontal cortex during working memory. A number of studies are also devoted to advancing our methodological toolkit for analyzing various aspects of population activity (Gerwinn et al., 2010; Machens, 2010; Staude et al., 2010; Yu et al., 2010). For example, Gerwinn et al. (2010) explain how full probabilistic inference can be performed in the popular model class of generalized linear models (GLMs), and study the effect of using prior distributions on the parameters of the stimulus and coupling filters. Staude et al. (2010) extend a method for detecting higher-order correlations between neurons via population spike counts to non-stationary settings. Yu et al. (2010) describe a new technique for estimating the information rate of a population of neurons using frequency-domain methods. Machens (2010) introduces a novel extension of principal component analysis for separating the variability of a neural response into different sources. Focusing less on the spike responses of neural populations but on aggregate signals of population activity, Boatman-Reich et al. (2010) and Hoerzer et al. (2010) describe methods for a quantitative analysis of field potential recordings. While Boatman-Reich et al. (2010) discuss a number of existing techniques in a unified framework and highlight the potential pitfalls associated with such approaches, Hoerzer et al. (2010) demonstrate how multivariate autoregressive models and the concept of Granger causality can be used to infer local functional connectivity in area V4 of behaving macaques. A final group of studies is devoted to understanding experimental data in light of computational models (Galán et al., 2010; Pandarinath et al., 2010; Shteingart et al., 2010). Pandarinath et al. (2010) present a novel mechanism that may explain how neural networks in the retina switch from one state to another by a change in gap junction coupling, and conjecture that this mechanism might also be found in other neural circuits. Galán et al. (2010) present a model of how hypoxia may change the network structure in the respiratory networks in the brainstem, and analyze neural correlations in multi-electrode recordings in light of this model. Finally, Shteingart et al. (2010) show that the spontaneous activation sequences they find in cultured networks cannot be explained by Zipf’s law, but rather require a wrestling model. The papers of this Research Topic thus span a wide range of topics in the statistical modeling of multi-cell recordings. Together with other recent advances, they provide us with a useful toolkit to tackle the challenges presented by the vast amount of data collected with modern recording techniques. The impact of novel statistical methods on the field and their potential to generate scientific progress, however, depends critically on how readily they can be adopted and applied by laboratories and researchers working with experimental data. An important step toward this goal is to also publish computer code along with the articles (Barnes, 2010) as a successful implementation of advanced methods also relies on many details which are hard to communicate in the article itself. In this way it becomes much more likely that other researchers can actually use the methods, and unnecessary re-implementations can be avoided. Some of the papers in this Research Topic already follow this goal (Gerwinn et al., 2010; Louis et al., 2010; Lyamzin et al., 2010). We hope that this practice becomes more and more common in the future and encourage authors and editors of Research Topics to make as much code available as possible, ideally in a format that can be easily integrated with existing software sharing initiatives (Herz et al., 2008; Goldberg et al., 2009)

    An integrative computational modelling of music structure apprehension

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    Space In The Ambience: : Is Ambient Music Socially Relevant?

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    Today, nearly every space that can be filled with digital content is filled with digital content. Even contemplative personal reflective time can now be digitally mediated. This is a different world from the one where the idea of ambient music first emerged. In the 1970s and early 1980s, our ambient environment featured no augmented reality overlays, fewer opportunities for distracted attention (unless they were deliberately sought out), and a vastly reduced need for personal multitasking. Then, fewer situations required a high degree of context switching to address incoming information from sources other than those which we have immersed ourselves in out of choice, and ambient music - as an idea, was born within those environmental and cognitive conditions. Now, new definitions of embodied cognition have demonstrated that our ambient environment is crucial for understanding the world through non-mediated forms of information, yet the idea initially behind much historical ambient music was one of inhabiting a space in our perception through which the un-mediated could be addressed. By defining historical ambient music as an information overlay itself where a surrounding environment is displaced temporarily and overlaid with new information (as with an augmented reality), an alternative trajectory of development can be mapped out. Why do we now create specific environments for ambient music listening, rather than allowing ambient music itself the chance to occupy those situations? Has the embodiment brought about by increasing interaction in public ambient art, through technological processes, changed how we respond to artistic material embedded in our own day-to-day ambience? This chapter performs an experimental re-assembly of the situated components of ambient music, originally inherited from a pre-internet, pre-information society. It provides an assessment of the relevance of ambient as an idea in a contemporary media-driven world where space in the ambience is already at a premium

    2001-2002 Ursinus College Course Catalogue

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    A digitized copy of the 2001-2002 Ursinus College Catalog. It contains details of the curriculum, departmental requirements and courses of instruction as well as lists of students, faculty and administrators. Student life, terms of admission, expenses and financial aid are also included as well as descriptions of the buildings and equipment available to students.https://digitalcommons.ursinus.edu/uccatalog/1054/thumbnail.jp

    Analysis of the backpack loading efects on the human gait

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    Gait is a simple activity of daily life and one of the main abilities of the human being. Often during leisure, labour and sports activities, loads are carried over (e.g. backpack) during gait. These circumstantial loads can generate instability and increase biomechanicalstress over the human tissues and systems, especially on the locomotor, balance and postural regulation systems. According to Wearing (2006), subjects that carry a transitory or intermittent load will be able to find relatively efficient solutions to compensate its effects.info:eu-repo/semantics/publishedVersio

    The University of Iowa 2020-21 General Catalog

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