Multi-object segmentation using coupled nonparametric shape and relative pose priors

We present a new method for multi-object segmentation in a maximum a posteriori estimation framework. Our method is motivated by the observation that neighboring or coupling objects in images generate configurations and co-dependencies which could potentially aid in segmentation if properly exploited. Our approach employs coupled shape and inter-shape pose priors that are computed using training images in a nonparametric multi-variate kernel density estimation framework. The coupled shape prior is obtained by estimating the joint shape distribution of multiple objects and the inter-shape pose priors are modeled via standard moments. Based on such statistical models, we formulate an optimization problem for segmentation, which we solve by an algorithm based on active contours. Our technique provides significant improvements in the segmentation of weakly contrasted objects in a number of applications. In particular for medical image analysis, we use our method to extract brain Basal Ganglia structures, which are members of a complex multi-object system posing a challenging segmentation problem. We also apply our technique to the problem of handwritten character segmentation. Finally, we use our method to segment cars in urban scenes

Achieving the Way for Automated Segmentation of Nuclei in Cancer Tissue Images through Morphology-Based Approach: a Quantitative Evaluation

In this paper we address the problem of nuclear segmentation in cancer tissue images, that is critical for specific protein activity quantification and for cancer diagnosis and therapy. We present a fully automated morphology-based technique able to perform accurate nuclear segmentations in images with heterogeneous staining and multiple tissue layers and we compare it with an alternate semi-automated method based on a well established segmentation approach, namely active contours. We discuss active contours’ limitations in the segmentation of immunohistochemical images and we demonstrate and motivate through extensive experiments the better accuracy of our fully automated approach compared to various active contours implementations

A phase field model incorporating generic and specific prior knowledge applied to road network extraction from VHR satellite images.

We address the problem of updating road maps in dense urban areas by extracting the main road network from a very high resolution (VHR) satellite image. Our model of the region occupied by the road network in the image is innovative. It incorporates three different types of prior geometric knowledge: generic boundary smoothness constraints, equivalent to a standard active contour prior; knowledge of the geometric properties of road networks (i.e. that they occupy regions composed of long, low-curvature segments joined at junctions), equivalent to a higher-order active contour prior; and knowledge of the road network at an earlier date derived from GIS data, similar to other ‘shape priors’ in the literature. In addition, we represent the road network region as a ‘phase field’, which offers a number of important advantages over other region modelling frameworks. All three types of prior knowledge prove important for overcoming the complexity of geometric ‘noise’ in VHR images. Promising results and a comparison with several other techniques demonstrate the effectiveness of our approach

A Phase Field Model Incorporating Generic and Specific Prior Knowledge Applied to Road Network Extraction from VHR Satellite Images

We address the problem of updating road maps in dense urban areas by extracting the main road network from a very high resolution (VHR) satellite image. Our model of the region occupied by the road network in the image is innovative. It incorporates three different types of prior geometric knowledge: generic boundary smoothness constraints, equivalent to a standard active contour prior; knowledge of the geometric properties of road networks (i.e. that they occupy regions composed of long, low-curvature segments joined at junctions), equivalent to a higher-order active contour prior; and knowledge of the road network at an earlier date derived from GIS data, similar to other ‘shape priors’ in the literature. In addition, we represent the road network region as a ‘phase field’, which offers a number of important advantages over other region modelling frameworks. All three types of prior knowledge prove important for overcoming the complexity of geometric ‘noise’ in VHR images. Promising results and a comparison with several other techniques demonstrate the effectiveness of our approach

Image Segmentation Using Weak Shape Priors

The problem of image segmentation is known to become particularly challenging in the case of partial occlusion of the object(s) of interest, background clutter, and the presence of strong noise. To overcome this problem, the present paper introduces a novel approach segmentation through the use of "weak" shape priors. Specifically, in the proposed method, an segmenting active contour is constrained to converge to a configuration at which its geometric parameters attain their empirical probability densities closely matching the corresponding model densities that are learned based on training samples. It is shown through numerical experiments that the proposed shape modeling can be regarded as "weak" in the sense that it minimally influences the segmentation, which is allowed to be dominated by data-related forces. On the other hand, the priors provide sufficient constraints to regularize the convergence of segmentation, while requiring substantially smaller training sets to yield less biased results as compared to the case of PCA-based regularization methods. The main advantages of the proposed technique over some existing alternatives is demonstrated in a series of experiments.Comment: 27 pages, 8 figure

Robust similarity registration technique for volumetric shapes represented by characteristic functions

This paper proposes a novel similarity registration technique for volumetric shapes implicitly represented by their characteristic functions (CFs). Here, the calculation of rotation parameters is considered as a spherical crosscorrelation problem and the solution is therefore found using the standard phase correlation technique facilitated by principal components analysis (PCA).Thus, fast Fourier transform (FFT) is employed to vastly improve efficiency and robustness. Geometric moments are then used for shape scale estimation which is independent from rotation and translation parameters. It is numericallydemonstrated that our registration method is able to handle shapes with various topologies and robust to noise and initial poses. Further validation of our method is performed by registering a lung database

An extended phase field higher-order active contour model for networks and its application to road network extraction from VHR satellite images.

This paper addresses the segmentation from an image of entities that have the form of a 'network', i.e. the region in the image corresponding to the entity is composed of branches joining together at junctions, e.g. road or vascular networks. We present a new phase field higher-order active contour (HOAC) prior model for network regions, and apply it to the segmentation of road networks from very high resolution satellite images. This is a hard problem for two reasons. First, the images are complex, with much 'noise' in the road region due to cars, road markings, etc., while the background is very varied, containing many features that are locally similar to roads. Second, network regions are complex to model, because they may have arbitrary topology. In particular, we address a severe limitation of a previous model in which network branch width was constrained to be similar to maximum network branch radius of curvature, thereby providing a poor model of networks with straight narrow branches or highly Curved, wide branches. To solve this problem, we propose a new HOAC prior energy term, and reformulate it as a nonlocal phase field energy. We analyse the stability of the new model, and find that in addition to solving the above problem by separating the interactions between points on the same and opposite sides of a network branch, the new model permits the modelling of two widths simultaneously. The analysis also fixes some of the model parameters in terms of network width(s). After adding a likelihood energy, we use the model to extract the road network quasi-automatically from pieces of a QuickBird image, and compare the results to other models in the literature. The results demonstrate the superiority of the new model, the importance of strong prior knowledge in general, and of the new term in particular