1,442 research outputs found
A geometric network model of intrinsic grey-matter connectivity of the human brain
Network science provides a general framework for analysing the large-scale brain networks that naturally arise from modern neuroimaging studies, and a key goal in theoretical neuro- science is to understand the extent to which these neural architectures influence the dynamical processes they sustain. To date, brain network modelling has largely been conducted at the macroscale level (i.e. white-matter tracts), despite growing evidence of the role that local grey matter architecture plays in a variety of brain disorders. Here, we present a new model of intrinsic grey matter connectivity of the human connectome. Importantly, the new model incorporates detailed information on cortical geometry to construct ‘shortcuts’ through the thickness of the cortex, thus enabling spatially distant brain regions, as measured along the cortical surface, to communicate. Our study indicates that structures based on human brain surface information differ significantly, both in terms of their topological network characteristics and activity propagation properties, when compared against a variety of alternative geometries and generative algorithms. In particular, this might help explain histological patterns of grey matter connectivity, highlighting that observed connection distances may have arisen to maximise information processing ability, and that such gains are consistent with (and enhanced by) the presence of short-cut connections
A morphospace of functional configuration to assess configural breadth based on brain functional networks
The best approach to quantify human brain functional reconfigurations in
response to varying cognitive demands remains an unresolved topic in network
neuroscience. We propose that such functional reconfigurations may be
categorized into three different types: i) Network Configural Breadth, ii)
Task-to-Task transitional reconfiguration, and iii) Within-Task
reconfiguration. In order to quantify these reconfigurations, we propose a
mesoscopic framework focused on functional networks (FNs) or communities. To do
so, we introduce a 2D network morphospace that relies on two novel mesoscopic
metrics, Trapping Efficiency (TE) and Exit Entropy (EE), which capture topology
and integration of information within and between a reference set of FNs. In
this study, we use this framework to quantify the Network Configural Breadth
across different tasks. We show that the metrics defining this morphospace can
differentiate FNs, cognitive tasks and subjects. We also show that network
configural breadth significantly predicts behavioral measures, such as episodic
memory, verbal episodic memory, fluid intelligence and general intelligence. In
essence, we put forth a framework to explore the cognitive space in a
comprehensive manner, for each individual separately, and at different levels
of granularity. This tool that can also quantify the FN reconfigurations that
result from the brain switching between mental states.Comment: main article: 24 pages, 8 figures, 2 tables. supporting information:
11 pages, 5 figure
TempoCave: Visualizing Dynamic Connectome Datasets to Support Cognitive Behavioral Therapy
We introduce TempoCave, a novel visualization application for analyzing
dynamic brain networks, or connectomes. TempoCave provides a range of
functionality to explore metrics related to the activity patterns and modular
affiliations of different regions in the brain. These patterns are calculated
by processing raw data retrieved functional magnetic resonance imaging (fMRI)
scans, which creates a network of weighted edges between each brain region,
where the weight indicates how likely these regions are to activate
synchronously. In particular, we support the analysis needs of clinical
psychologists, who examine these modular affiliations and weighted edges and
their temporal dynamics, utilizing them to understand relationships between
neurological disorders and brain activity, which could have a significant
impact on the way in which patients are diagnosed and treated. We summarize the
core functionality of TempoCave, which supports a range of comparative tasks,
and runs both in a desktop mode and in an immersive mode. Furthermore, we
present a real-world use case that analyzes pre- and post-treatment connectome
datasets from 27 subjects in a clinical study investigating the use of
cognitive behavior therapy to treat major depression disorder, indicating that
TempoCave can provide new insight into the dynamic behavior of the human brain
The hidden geometry of the brain
The human brain connectome is a topologically complex, spatially embedded network. One of the characteristic, basic, nonrandom rules on which brain topology relies on is the tendency of brain networks nodes to cluster into modules with high efficiency and short path length, thus reflecting an intrinsic small-world behavior, functionally segregated (local clustering) and integrated (global efficiency) [1]. Although network topology seems to be somehow connected to network geometry, one of the most challenging issues of the current network science is to infer the hidden geometry from the mere topology of a complex network. Here in, aiming at disclosing the latent geometry of the brain, we apply coalescent embedding – a novel advanced technique able to map a given network in the hyperbolic space inferring the node angular coordinates - on different structural brain networks [2]. Interestingly, we show that we can unsupervisedly reconstruct the intrinsic brain geometry with an incredible level of accuracy and that it strongly resembles the known brain anatomy. As a matter of fact, the first rule of organization of brain networks emerging in the hyperbolic space is their structural segregation into two distinct sections corresponding to the left and right hemispheres, which is a simple concept yet quite neglected in previous studies on brain connectomics. In addition, we demonstrate that the human structural brain networks exhibited a significant different geometry in two age range-specific groups. Finally, we show that the intrinsic geometry of Parkinson’s Disease patients is significantly altered compared to the healthy subjects as revealed by two novel latent geometry markers. The present study may bridge the gap between brain networks topology and geometry and may open a completely new scenario towards the realization of latent geometry network markers for the evaluation of brain disorders
Dwelling Quietly in the Rich Club: Brain Network Determinants of Slow Cortical Fluctuations
For more than a century, cerebral cartography has been driven by
investigations of structural and morphological properties of the brain across
spatial scales and the temporal/functional phenomena that emerge from these
underlying features. The next era of brain mapping will be driven by studies
that consider both of these components of brain organization simultaneously --
elucidating their interactions and dependencies. Using this guiding principle,
we explored the origin of slowly fluctuating patterns of synchronization within
the topological core of brain regions known as the rich club, implicated in the
regulation of mood and introspection. We find that a constellation of densely
interconnected regions that constitute the rich club (including the anterior
insula, amygdala, and precuneus) play a central role in promoting a stable,
dynamical core of spontaneous activity in the primate cortex. The slow time
scales are well matched to the regulation of internal visceral states,
corresponding to the somatic correlates of mood and anxiety. In contrast, the
topology of the surrounding "feeder" cortical regions show unstable, rapidly
fluctuating dynamics likely crucial for fast perceptual processes. We discuss
these findings in relation to psychiatric disorders and the future of
connectomics.Comment: 35 pages, 6 figure
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