Approximability of Connected Factors

Finding a d-regular spanning subgraph (or d-factor) of a graph is easy by Tutte's reduction to the matching problem. By the same reduction, it is easy to find a minimal or maximal d-factor of a graph. However, if we require that the d-factor is connected, these problems become NP-hard - finding a minimal connected 2-factor is just the traveling salesman problem (TSP). Given a complete graph with edge weights that satisfy the triangle inequality, we consider the problem of finding a minimal connected $d$-factor. We give a 3-approximation for all $d$ and improve this to an (r+1)-approximation for even d, where r is the approximation ratio of the TSP. This yields a 2.5-approximation for even d. The same algorithm yields an (r+1)-approximation for the directed version of the problem, where r is the approximation ratio of the asymmetric TSP. We also show that none of these minimization problems can be approximated better than the corresponding TSP. Finally, for the decision problem of deciding whether a given graph contains a connected d-factor, we extend known hardness results.Comment: To appear in the proceedings of WAOA 201

Modeling the geometry of the endoplasmic reticulum network

Conference ProceedingFirst International Conference, AlCoB 2014, held in July 2014 in Tarragona, Spain.We have studied the network geometry of the endoplasmic reticulum by means of graph theoretical and integer programming models. The purpose is to represent this structure as close as possible by a class of finite, undirected and connected graphs the nodes of which have to be either of degree three or at most of degree three. We determine plane graphs of minimal total edge length satisfying degree and angle constraints, and we show that the optimal graphs are close to the ER network geometry. Basically, two procedures are formulated to solve the optimization problem: a binary linear program, that iteratively constructs an optimal solution, and a linear program, that iteratively exploits additional cutting planes from different families to accelerate the solution process. All formulations have been implemented and tested on a series of real-life and randomly generated cases. The cutting plane approach turns out to be particularly efficient for the real-life testcases, since it outperforms the pure integer programming approach by a factor of at least 10. © 2014 Springer International Publishing

On the Complexity Landscape of Connected f-Factor Problems

Given an n-vertex graph G and a function f:V(G) -> {0, ..., n-1}, an f-factor is a subgraph H of G such that deg_H(v)=f(v) for every vertex v in V(G); we say that H is a connected f-factor if, in addition, the subgraph H is connected. A classical result of Tutte (1954) is the polynomial time algorithm to check whether a given graph has a specified f-factor. However, checking for the presence of a connected f-factor is easily seen to generalize Hamiltonian Cycle and hence is NP-complete. In fact, the Connected f-Factor problem remains NP-complete even when f(v) is at least n^epsilon for each vertex v and epsilon<1; on the other side of the spectrum, the problem was known to be polynomial-time solvable when f(v) is at least n/3 for every vertex v. In this paper, we extend this line of work and obtain new complexity results based on restricting the function f. In particular, we show that when f(v) is required to be at least n/(log n)^c, the problem can be solved in quasi-polynomial time in general and in randomized polynomial time if c 1, the problem is NP-intermediate

On the complexity landscape of connected f-factor problems

Let G be an undirected simple graph having n vertices and let f:V(G)→{0,…,n−1} be a function. An f-factor of G is a spanning subgraph H such that dH(v)=f(v) for every vertex v∈V(G). The subgraph H is called a connected f-factor if, in addition, H is connected. A classical result of Tutte (Can J Math 6(1954):347–352, 1954) is the polynomial time algorithm to check whether a given graph has a specified f-factor. However, checking for the presence of a connectedf-factor is easily seen to generalize Hamiltonian Cycle and hence is NP-complete. In fact, the Connected f-Factor problem remains NP-complete even when we restrict f(v) to be at least nϵ for each vertex v and constant 0≤ϵ1, the problem is NP-intermediate

The Parameterized Complexity of Degree Constrained Editing Problems

This thesis examines degree constrained editing problems within the framework of parameterized complexity. A degree constrained editing problem takes as input a graph and a set of constraints and asks whether the graph can be altered in at most k editing steps such that the degrees of the remaining vertices are within the given constraints. Parameterized complexity gives a framework for examining problems that are traditionally considered intractable and developing efficient exact algorithms for them, or showing that it is unlikely that they have such algorithms, by introducing an additional component to the input, the parameter, which gives additional information about the structure of the problem. If the problem has an algorithm that is exponential in the parameter, but polynomial, with constant degree, in the size of the input, then it is considered to be fixed-parameter tractable. Parameterized complexity also provides an intractability framework for identifying problems that are likely to not have such an algorithm. Degree constrained editing problems provide natural parameterizations in terms of the total cost k of vertex deletions, edge deletions and edge additions allowed, and the upper bound r on the degree of the vertices remaining after editing. We define a class of degree constrained editing problems, WDCE, which generalises several well know problems, such as Degree r Deletion, Cubic Subgraph, r-Regular Subgraph, f-Factor and General Factor. We show that in general if both k and r are part of the parameter, problems in the WDCE class are fixed-parameter tractable, and if parameterized by k or r alone, the problems are intractable in a parameterized sense. We further show cases of WDCE that have polynomial time kernelizations, and in particular when all the degree constraints are a single number and the editing operations include vertex deletion and edge deletion we show that there is a kernel with at most O(kr(k + r)) vertices. If we allow vertex deletion and edge addition, we show that despite remaining fixed-parameter tractable when parameterized by k and r together, the problems are unlikely to have polynomial sized kernelizations, or polynomial time kernelizations of a certain form, under certain complexity theoretic assumptions. We also examine a more general case where given an input graph the question is whether with at most k deletions the graph can be made r-degenerate. We show that in this case the problems are intractable, even when r is a constant