Heart rate variability in normal and pathological sleep

Sleep is a physiological process involving different biological systems, from molecular to organ level; its integrity is essential for maintaining health and homeostasis in human beings. Although in the past sleep has been considered a state of quiet, experimental and clinical evidences suggest a noteworthy activation of different biological systems during sleep. A key role is played by the autonomic nervous system (ANS), whose modulation regulates cardiovascular functions during sleep onset and different sleep stages. Therefore, an interest on the evaluation of autonomic cardiovascular control in health and disease is growing by means of linear and non-linear heart rate variability (HRV) analyses. the application of classical tools for ANS analysis, such as HRV during physiological sleep, showed that the rapid eye movement (REM) stage is characterized by a likely sympathetic predominance associated with a vagal withdrawal, while the opposite trend is observed during non-REM sleep. More recently, the use of non-linear tools, such as entropy-derived indices, have provided new insight on the cardiac autonomic regulation, revealing for instance changes in the cardiovascular complexity during REM sleep, supporting the hypothesis of a reduced capability of the cardiovascular system to deal with stress challenges. Interestingly, different HRV tools have been applied to characterize autonomic cardiac control in different pathological conditions, from neurological sleep disorders to sleep disordered breathing (SDB). in summary, linear and non-linear analysis of HRV are reliable approaches to assess changes of autonomic cardiac modulation during sleep both in health and diseases. the use of these tools could provide important information of clinical and prognostic relevance.European Regional Development Fund-Project FNUSA-ICRCUniv Milan, L Sacco Hosp, Dept Biomed & Clin Sci L Sacco, Div Med & Pathophysiol, I-20157 Milan, ItalyOsped Niguarda Ca Granda, Ctr Epilepsy Surg C Munari, Ctr Sleep Med, Dept Neurosci, Milan, ItalyUniversidade Federal de São Paulo, Inst Sci & Technol, Dept Sci & Technol, São Paulo, BrazilUniv Fdn Cardiol, Inst Cardiol Rio Grande do Sul, Porto Alegre, RS, BrazilFdn S Maugeri, Sleep Med Unit, Veruno, ItalySt Annes Univ Hosp, Int Clin Res Ctr, Brno, Czech RepublicUniversidade Federal de São Paulo, Inst Sci & Technol, Dept Sci & Technol, São Paulo, BrazilEuropean Regional Development Fund-Project FNUSA-ICRC: CZ.1.05/1.1.00/02.0123Web of Scienc

Sleep-wake stages classification using heart rate signals from pulse oximetry

The most important index of obstructive sleep apnea/hypopnea syndrome (OSAHS) is the apnea/hyponea index (AHI). The AHI is the number of apnea/hypopnea events per hour of sleep. Algorithms for the screening of OSAHS from pulse oximetry estimate an approximation to AHI counting the desaturation events without consider the sleep stage of the patient. This paper presents an automatic system to determine if a patient is awake or asleep using heart rate (HR) signals provided by pulse oximetry. In this study, 70 features are estimated using entropy and complexity measures, frequency domain and time-scale domain methods, and classical statistics. The dimension of feature space is reduced from 70 to 40 using three different schemes based on forward feature selection with support vector machine and feature importance with random forest. The algorithms were designed, trained and tested with 5000 patients from the Sleep Heart Health Study database. In the test stage, 10-fold cross validation method was applied obtaining performances up to 85.2% accuracy, 88.3% specificity, 79.0% sensitivity, 67.0% positive predictive value, and 91.3% negative predictive value. The results are encouraging, showing the possibility of using HR signals obtained from the same oximeter to determine the sleep stage of the patient, and thus potentially improving the estimation of AHI based on only pulse oximetry.Fil: Casal, Ramiro. Universidad Nacional de Entre Ríos. Instituto de Investigación y Desarrollo en Bioingeniería y Bioinformática - Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Santa Fe. Instituto de Investigación y Desarrollo en Bioingeniería y Bioinformática; ArgentinaFil: Di Persia, Leandro Ezequiel. Universidad Nacional del Litoral. Facultad de Ingeniería y Ciencias Hídricas. Departamento de Informática. Laboratorio de Investigaciones en Señales e Inteligencia Computacional; ArgentinaFil: Schlotthauer, Gaston. Universidad Nacional de Entre Ríos. Instituto de Investigación y Desarrollo en Bioingeniería y Bioinformática - Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Santa Fe. Instituto de Investigación y Desarrollo en Bioingeniería y Bioinformática; Argentin

Non-linear Analysis of Heart rate Variability Improves Differential Diagnosis Between Parkinson Diseases and Multiple System Atrophy

Aims: Parkinson's disease (PD) and multiple system atrophy (MSA) are neurodegenerative disorders characterized by motor "parkinsonian" symptoms and non-motor symptoms related to autonomic nervous system (ANS) dysfunction. The latter can be quantified with the analysis of Heart Rate Variability (HRVa) and of its complexity. In this study nonlinear (NL) HRV complexity parameters were calculated to assess their predictive accuracy as markers of “disease” useful for early differentiation between PD and MSA in parkinsonian syndromes of uncertain diagnosis. Study Design: Observational study. Place and Duration of Study: Clinical Physiology-Biomagnetism Center, Policlinico A. Gemelli, Rome Italy. Patients enrolled from January 2010 to October 2013. Methodology: 51 patients [25 with “certain” diagnosis of PD, 9 with a “highly probable” diagnosis of MSA and 17 with parkinsonian syndromes of uncertain neurological definition (6 with “undefined parkinsonism” and 11 with “suspected MSA”)] and 40 age-matched healthy control subjects were studied. Short-term NL HRVa was performed during daily activity and during REM/NREM sleep from 24 h ECG recordings. Discriminant analysis (DA) was used to identify which NL HRV parameters (or their combination) were efficient to differentiate between PD and MSA in cases of uncertain diagnosis. Results: Compared with healthy controls, most NL HRV parameters were significantly altered in patients (p<0.05), during both active and passive awakeness and during sleep. Most evident HRV abnormalities were found during active awakeness in MSA. DA of recurrence plot parameters provided the best predictive accuracy (76.5%) for the classification of parkinsonian patients with uncertain diagnosis. Conclusion: NL HRVa is efficient in differentiating MSA from PD and may improve earlier diagnosis in patients with parkinsonian symptoms of uncertain nature, useful to address second level diagnostic steps and to guide more individualized drug treatment

Obstructive Sleep Apnea Detection based on ECG Signal using Statistical Features of Wavelet Subband

One of the respiratory disorders is obstructive sleep apnea (OSA). OSA occurs when a person sleeps. OSA causes breathing to stop momentarily due to obstruction in the airways. In this condition, people with OSA will be deprived of oxygen, sleep awake and short of breath. Diagnosis of OSA by a doctor can be done by confirming the patient\u27s complaints during sleep, sleep patterns, and other symptoms that point to OSA. Another way of diagnosing OSA is a polysomnography (PSG) examination in the laboratory to analyze apnea and hypopnea. However, this examination tends to be high cost and time consuming. An alternative diagnostic tool is an electrocardiogram (ECG) examination referring to changes in the mechanism of ECG-derived respiration (EDR). So digital ECG signal analysis is a potential tool for OSA detection. Therefore, in this study, it is proposed to classify OSA based on ECG signals using wavelets and statistical parameters. Statistical parameters include mean, variance, skewness kurtosis entropy calculated on the signal decomposition results. The validation performance of the proposed method is carried out using a support vector machine, k-nearest neighbor (k-NN), and ensemble classifier. The proposed method produces the highest accuracy of 89.2% using a bagged tree where all features are used as predictors. From this study, it is hoped that ECG signal analysis can be used to complete clinical diagnosis in detecting OSA

A Comprehensive Review of Techniques for Processing and Analyzing Fetal Heart Rate Signals

The availability of standardized guidelines regarding the use of electronic fetal monitoring (EFM) in clinical practice has not effectively helped to solve the main drawbacks of fetal heart rate (FHR) surveillance methodology, which still presents inter- and intra-observer variability as well as uncertainty in the classification of unreassuring or risky FHR recordings. Given the clinical relevance of the interpretation of FHR traces as well as the role of FHR as a marker of fetal wellbeing autonomous nervous system development, many different approaches for computerized processing and analysis of FHR patterns have been proposed in the literature. The objective of this review is to describe the techniques, methodologies, and algorithms proposed in this field so far, reporting their main achievements and discussing the value they brought to the scientific and clinical community. The review explores the following two main approaches to the processing and analysis of FHR signals: traditional (or linear) methodologies, namely, time and frequency domain analysis, and less conventional (or nonlinear) techniques. In this scenario, the emerging role and the opportunities offered by Artificial Intelligence tools, representing the future direction of EFM, are also discussed with a specific focus on the use of Artificial Neural Networks, whose application to the analysis of accelerations in FHR signals is also examined in a case study conducted by the authors

Vauvojen unen luokittelu patja-sensorilla ja EKG:lla

Infants spend the majority of their time asleep. Although extensive studies have been carried out, the role of sleep for infant cognitive, psychomotor, temperament and developmental outcomes is not clear. The current contradictory results may be due to the limited precision when monitoring infant sleep for prolonged periods of time, from weeks to even months. Sleep-wake cycle can be assessed with sleep questionnaires and actigraphy, but they cannot separate sleep stages. The gold standard for sleep state annotation is polysomnography (PSG), which consist of several signal modalities such as electroencephalogram, electrooculogram, electrocardiogram (ECG), electromyogram, respiration sensor and pulse oximetry. A sleep clinician manually assigns sleep stages for 30 sec epochs based on the visual observation of these signals. Because method is obtrusive and laborious it is not suitable for monitoring long periods. There is, therefore, a need for an automatic and unobtrusive sleep staging approach. In this work, a set of classifiers for infant sleep staging was created and evaluated. The cardiorespiratory and gross body movement signals were used as an input. The different classifiers aim to distinguish between two or more different sleep states. The classifiers were built on a clinical sleep polysomnography data set of 48 infants with ages ranging from 1 week to 18 weeks old (a median of 5 weeks). Respiration and gross body movements were observed using an electromechanical film bed mattress sensor manufactured by Emfit Ltd. ECG of the PSG setup was used for extracting cardiac activity. Signals were preprocessed to remove artefacts and an extensive set of features (N=81) were extracted on which the classifiers were trained. The NREM3 vs other states classifier provided the most accurate results. The median accuracy was 0.822 (IQR: 0.724-0.914). This is comparable to previously published studies on other sleep classifiers, as well as to the level of clinical interrater agreement. Classification methods were confounded by the lack of muscle atonia and amount of gross body movements in REM sleep. The proposed method could be readily applied for home monitoring, as well as for monitoring in neonatal intensive care units.Vauvat nukkuvat suurimman osan vuorokaudesta. Vaikkakin laajasti on tutkittu unen vaikutusta lapsen kognitioon, psykomotoriikkaan, temperamenttiin ja kehitykseen, selkeää kuvaa ja yhtenäistä konsensusta tiedeyhteisössä ei ole saavutettu. Yksi syy tähän on että ei ole olemassa menetelmää, joka soveltuisi jatkuva-aikaiseen ja pitkäkestoiseen unitilan monitorointiin. Vauvojen uni-valve- sykliä voidaan selvittää vanhemmille suunnatuilla kyselyillä ja aktigrafialla, mutta näillä ei voi havaita unitilojen rakennetta. Kliinisenä standardina unitilojen seurannassa on polysomnografia, jossa samanaikaisesti mitataan mm. potilaan elektroenkelografiaa, elektro-okulografiaa, elektrokardiografiaa, electromyografiaa, hengitysinduktiivisesta pletysmografiaa, happisaturaatiota ja hengitysvirtauksia. Kliinikko suorittaa univaiheluokittelun signaaleista näkyvien, vaiheille tyypillisten, hahmojen perusteella. Työläyden ja häiritsevän mittausasetelman takia menetelmä ei sovellu pitkäaikaiseen seurantaan. On tarvetta kehittää tarkoitukseen sopivia automaattisia ja huomaamattomia unenseurantamenetelmiä. Tässä työssä kehitettiin ja testattiin sydämen syke-, hengitys ja liikeanalyysiin perustuvia koneluokittimia vauvojen unitilojen havainnointiin. Luokittimet opetettiin kliinisessa polysomnografiassa kerätyllä datalla 48 vauvasta, joiden ikä vaihteli 1. viikosta 18. viikkoon (mediaani 5 viikkoa). Vauvojen hengitystä ja liikkeitä seurattiin Emfit Oy:n valmistamalla elektromekaaniseen filmiin pohjatuvalla patja-sensorilla. Lisäksi ECG:lla seurattiin sydäntä ja opetuksessa käytettiin lääkärin suorittamaa PSG-pohjaista luokitusta. Esikäsittelyn jälkeen signaaleista laskettiin suuri joukko piirrevektoreita (N=81), joihin luokittelu perustuu. NREM3-univaiheen tunnistus onnistui parhaiten 0.822 mediaani-tarkkuudella ja [0.724,0.914] kvartaaleilla. Tulos on yhtenevä kirjallisuudessa esitettyjen arvojen kanssa ja vastaa kliinikkojen välistä toistettavuutta. Muilla luokittimilla univaiheet sekoituivat keskenään, mikä on oletattavasti selitettävissä aikuisista poikeavalla REM-unen aikaisella lihasjäykkyydellä ja kehon liikkeillä. Työ osoittaa, että menetelmällä voi seurata vauvojen uniluokkien oskillaatiota. Järjestelmää voisi käyttää kotiseurannassa tai vastasyntyneiden teholla unenvalvontaan

FEATURE EXTRACTION AND CLASSIFICATION THROUGH ENTROPY MEASURES

Entropy is a universal concept that represents the uncertainty of a series of random events. The notion \u201centropy" is differently understood in different disciplines. In physics, it represents the thermodynamical state variable; in statistics it measures the degree of disorder. On the other hand, in computer science, it is used as a powerful tool for measuring the regularity (or complexity) in signals or time series. In this work, we have studied entropy based features in the context of signal processing. The purpose of feature extraction is to select the relevant features from an entity. The type of features depends on the signal characteristics and classification purpose. Many real world signals are nonlinear and nonstationary and they contain information that cannot be described by time and frequency domain parameters, instead they might be described well by entropy. However, in practice, estimation of entropy suffers from some limitations and is highly dependent on series length. To reduce this dependence, we have proposed parametric estimation of various entropy indices and have derived analytical expressions (when possible) as well. Then we have studied the feasibility of parametric estimations of entropy measures on both synthetic and real signals. The entropy based features have been finally employed for classification problems related to clinical applications, activity recognition, and handwritten character recognition. Thus, from a methodological point of view our study deals with feature extraction, machine learning, and classification methods. The different versions of entropy measures are found in the literature for signals analysis. Among them, approximate entropy (ApEn), sample entropy (SampEn) followed by corrected conditional entropy (CcEn) are mostly used for physiological signals analysis. Recently, entropy features are used also for image segmentation. A related measure of entropy is Lempel-Ziv complexity (LZC), which measures the complexity of a time-series, signal, or sequences. The estimation of LZC also relies on the series length. In particular, in this study, analytical expressions have been derived for ApEn, SampEn, and CcEn of an auto-regressive (AR) models. It should be mentioned that AR models have been employed for maximum entropy spectral estimation since many years. The feasibility of parametric estimates of these entropy measures have been studied on both synthetic series and real data. In feasibility study, the agreement between numeral estimates of entropy and estimates obtained through a certain number of realizations of the AR model using Montecarlo simulations has been observed. This agreement or disagreement provides information about nonlinearity, nonstationarity, or nonGaussinaity presents in the series. In some classification problems, the probability of agreement or disagreement have been proved as one of the most relevant features. VII After feasibility study of the parametric entropy estimates, the entropy and related measures have been applied in heart rate and arterial blood pressure variability analysis. The use of entropy and related features have been proved more relevant in developing sleep classification, handwritten character recognition, and physical activity recognition systems. The novel methods for feature extraction researched in this thesis give a good classification or recognition accuracy, in many cases superior to the features reported in the literature of concerned application domains, even with less computational costs