1,024 research outputs found
Transformations of High-Level Synthesis Codes for High-Performance Computing
Specialized hardware architectures promise a major step in performance and
energy efficiency over the traditional load/store devices currently employed in
large scale computing systems. The adoption of high-level synthesis (HLS) from
languages such as C/C++ and OpenCL has greatly increased programmer
productivity when designing for such platforms. While this has enabled a wider
audience to target specialized hardware, the optimization principles known from
traditional software design are no longer sufficient to implement
high-performance codes. Fast and efficient codes for reconfigurable platforms
are thus still challenging to design. To alleviate this, we present a set of
optimizing transformations for HLS, targeting scalable and efficient
architectures for high-performance computing (HPC) applications. Our work
provides a toolbox for developers, where we systematically identify classes of
transformations, the characteristics of their effect on the HLS code and the
resulting hardware (e.g., increases data reuse or resource consumption), and
the objectives that each transformation can target (e.g., resolve interface
contention, or increase parallelism). We show how these can be used to
efficiently exploit pipelining, on-chip distributed fast memory, and on-chip
streaming dataflow, allowing for massively parallel architectures. To quantify
the effect of our transformations, we use them to optimize a set of
throughput-oriented FPGA kernels, demonstrating that our enhancements are
sufficient to scale up parallelism within the hardware constraints. With the
transformations covered, we hope to establish a common framework for
performance engineers, compiler developers, and hardware developers, to tap
into the performance potential offered by specialized hardware architectures
using HLS
Interstellar: Using Halide's Scheduling Language to Analyze DNN Accelerators
We show that DNN accelerator micro-architectures and their program mappings
represent specific choices of loop order and hardware parallelism for computing
the seven nested loops of DNNs, which enables us to create a formal taxonomy of
all existing dense DNN accelerators. Surprisingly, the loop transformations
needed to create these hardware variants can be precisely and concisely
represented by Halide's scheduling language. By modifying the Halide compiler
to generate hardware, we create a system that can fairly compare these prior
accelerators. As long as proper loop blocking schemes are used, and the
hardware can support mapping replicated loops, many different hardware
dataflows yield similar energy efficiency with good performance. This is
because the loop blocking can ensure that most data references stay on-chip
with good locality and the processing units have high resource utilization. How
resources are allocated, especially in the memory system, has a large impact on
energy and performance. By optimizing hardware resource allocation while
keeping throughput constant, we achieve up to 4.2X energy improvement for
Convolutional Neural Networks (CNNs), 1.6X and 1.8X improvement for Long
Short-Term Memories (LSTMs) and multi-layer perceptrons (MLPs), respectively.Comment: Published as a conference paper at ASPLOS 202
A general framework for efficient FPGA implementation of matrix product
Original article can be found at: http://www.medjcn.com/ Copyright Softmotor LimitedHigh performance systems are required by the developers for fast processing of computationally intensive applications. Reconfigurable hardware devices in the form of Filed-Programmable Gate Arrays (FPGAs) have been proposed as viable system building blocks in the construction of high performance systems at an economical price. Given the importance and the use of matrix algorithms in scientific computing applications, they seem ideal candidates to harness and exploit the advantages offered by FPGAs. In this paper, a system for matrix algorithm cores generation is described. The system provides a catalog of efficient user-customizable cores, designed for FPGA implementation, ranging in three different matrix algorithm categories: (i) matrix operations, (ii) matrix transforms and (iii) matrix decomposition. The generated core can be either a general purpose or a specific application core. The methodology used in the design and implementation of two specific image processing application cores is presented. The first core is a fully pipelined matrix multiplier for colour space conversion based on distributed arithmetic principles while the second one is a parallel floating-point matrix multiplier designed for 3D affine transformations.Peer reviewe
Systolic array synthesis by static analysis of program dependencies
Journal ArticleWe present a technique for mapping recurrence equations to systolic arrays. While this problem has been studied in fairly great detail, the recurrence equations that are analysed here are a generalization of those studied previously. In a n earlier paper (14] we have showed how systolic arrays can be synthesized from such generalized recurrence equations by a combination of affine transformations and explicit pipelining. This paper extends the results in two directions. Firstly, a multistage pipelining technique is proposed, which permits the synthesis of systolic arrays with irregular data flow. Secondly we develop analysis techniques for the synthesis of systolic arrays whose computation is governed by control signals in a systematic manner which is amenable to mechanization. The full paper also discusses how these techniques can be applied to the mapping problem for more general architectures
Coarse-grained reconfigurable array architectures
Coarse-Grained ReconïŹgurable Array (CGRA) architectures accelerate the same inner loops that beneïŹt from the high ILP support in VLIW architectures. By executing non-loop code on other cores, however, CGRAs can focus on such loops to execute them more efïŹciently. This chapter discusses the basic principles of CGRAs, and the wide range of design options available to a CGRA designer, covering a large number of existing CGRA designs. The impact of different options on ïŹexibility, performance, and power-efïŹciency is discussed, as well as the need for compiler support. The ADRES CGRA design template is studied in more detail as a use case to illustrate the need for design space exploration, for compiler support and for the manual ïŹne-tuning of source code
Systolic Array Implementations With Reduced Compute Time.
The goal of the research is the establishment of a formal methodology to develop computational structures more suitable for the changing nature of real-time signal processing and control applications. A major effort is devoted to the following question: Given a systolic array designed to execute a particular algorithm, what other algorithms can be executed on the same array? One approach for answering this question is based on a general model of array operations using graph-theoretic techniques. As a result, a systematic procedure is introduced that models array operations as a function of the compute cycle. As a consequence of the analysis, the dissertation develops the concept of fast algorithm realizations. This concept characterizes specific realizations that can be evaluated in a reduced number of cycles. It restricts the operations to remain in the same class but with reduced execution time. The concept takes advantage of the data dependencies of the algorithm at hand. This feature allows the modification of existing structures by reordering the input data. Applications of the principle allows optimum time band and triangular matrix product on arrays designed for dense matrices. A second approach for analyzing the families of algorithms implementable in an array, is based on the concept of array time constrained operation. The principle uses the number of compute cycle as an additional degree of freedom to expand the class of transformations generated by a single array. A mathematical approach, based on concepts from multilinear algebra, is introduced to model the recursive transformations implemented in linear arrays at each compute cycle. The proposed representation is general enough to encompass a large class of signal processing and control applications. A complete analytical model of the linear maps implementable by the array at each compute cycle is developed. The proposed methodology results in arrays that are more adaptable to the changing nature of operations. Lessons learned from analyzing existing arrays are used to design smart arrays for special algorithm realizations. Applications of the methodology include the design of flexible time structures and the ability to decompose a full size array into subarrays implementing smaller size problems
Parallelization of dynamic programming recurrences in computational biology
The rapid growth of biosequence databases over the last decade has led to a performance bottleneck in the applications analyzing them. In particular, over the last five years DNA sequencing capacity of next-generation sequencers has been doubling every six months as costs have plummeted. The data produced by these sequencers is overwhelming traditional compute systems. We believe that in the future compute performance, not sequencing, will become the bottleneck in advancing genome science. In this work, we investigate novel computing platforms to accelerate dynamic programming algorithms, which are popular in bioinformatics workloads. We study algorithm-specific hardware architectures that exploit fine-grained parallelism in dynamic programming kernels using field-programmable gate arrays: FPGAs). We advocate a high-level synthesis approach, using the recurrence equation abstraction to represent dynamic programming and polyhedral analysis to exploit parallelism. We suggest a novel technique within the polyhedral model to optimize for throughput by pipelining independent computations on an array. This design technique improves on the state of the art, which builds latency-optimal arrays. We also suggest a method to dynamically switch between a family of designs using FPGA reconfiguration to achieve a significant performance boost. We have used polyhedral methods to parallelize the Nussinov RNA folding algorithm to build a family of accelerators that can trade resources for parallelism and are between 15-130x faster than a modern dual core CPU implementation. A Zuker RNA folding accelerator we built on a single workstation with four Xilinx Virtex 4 FPGAs outperforms 198 3 GHz Intel Core 2 Duo processors. Furthermore, our design running on a single FPGA is an order of magnitude faster than competing implementations on similar-generation FPGAs and graphics processors. Our work is a step toward the goal of automated synthesis of hardware accelerators for dynamic programming algorithms
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