Delineation of agricultural fields using multi-task BsiNet from high-resolution satellite images

This paper presents a new multi-task neural network, called BsiNet, to delineate agricultural fields from high-resolution satellite images. BsiNet is modified from a Psi-Net by structuring three parallel decoders into a single encoder to improve computational efficiency. BsiNet learns three tasks: a core task for agricultural field identification and two auxiliary tasks for field boundary prediction and distance estimation, corresponding to mask, boundary, and distance tasks, respectively. A spatial group-wise enhancement module is incorporated to improve the identification of small fields. We conducted experiments on a GaoFen1 and three GaoFen2 satellite images collected in Xinjiang, Fujian, Shandong, and Sichuan provinces in China, and compared BsiNet with 13 different neural networks. Our results show that the agricultural fields extracted by BsiNet have the lowest global over-classification (GOC) of 0.062, global under-classification (GUC) of 0.042, and global total errors (GTC) of 0.062 for the Xinjiang dataset. For the Fujian dataset with irregular and complex fields, BsiNet outperformed the second-best method from the Xinjiang dataset analysis, yielding the lowest GTC of 0.291. It also produced satisfactory results on the Shandong and Sichuan datasets. Moreover, BsiNet has fewer parameters and faster computation than existing multi-task models (i.e., Psi-Net and ResUNet-a D7). We conclude that BsiNet can be used successfully in extracting agricultural fields from high-resolution satellite images and can be applied to different field settings.</p

Semantic Segmentation for Fully Automated Macrofouling Analysis on Coatings after Field Exposure

Biofouling is a major challenge for sustainable shipping, filter membranes, heat exchangers, and medical devices. The development of fouling-resistant coatings requires the evaluation of their effectiveness. Such an evaluation is usually based on the assessment of fouling progression after different exposure times to the target medium (e.g., salt water). The manual assessment of macrofouling requires expert knowledge about local fouling communities due to high variances in phenotypical appearance, has single-image sampling inaccuracies for certain species, and lacks spatial information. Here we present an approach for automatic image-based macrofouling analysis. We created a dataset with dense labels prepared from field panel images and propose a convolutional network (adapted U-Net) for the semantic segmentation of different macrofouling classes. The establishment of macrofouling localization allows for the generation of a successional model which enables the determination of direct surface attachment and in-depth epibiotic studies.Comment: 33 pages, 10 figure

Trends in forensic microbiology: From classical methods to deep learning

Forensic microbiology has been widely used in the diagnosis of causes and manner of death, identification of individuals, detection of crime locations, and estimation of postmortem interval. However, the traditional method, microbial culture, has low efficiency, high consumption, and a low degree of quantitative analysis. With the development of high-throughput sequencing technology, advanced bioinformatics, and fast-evolving artificial intelligence, numerous machine learning models, such as RF, SVM, ANN, DNN, regression, PLS, ANOSIM, and ANOVA, have been established with the advancement of the microbiome and metagenomic studies. Recently, deep learning models, including the convolutional neural network (CNN) model and CNN-derived models, improve the accuracy of forensic prognosis using object detection techniques in microorganism image analysis. This review summarizes the application and development of forensic microbiology, as well as the research progress of machine learning (ML) and deep learning (DL) based on microbial genome sequencing and microbial images, and provided a future outlook on forensic microbiology

A systematic review of deep learning microalgae classification and detection

Algae represent the majority of the diversity on Earth and are a large group of organisms that have photosynthetic properties that are important to life. The species of algae are estimated to be more than 1 million, they play an important role in many fields such as agriculture, industry, food, and medicine. It is important to determine the type of algae, to determine if it is harmful or useful, and to indicate the health of the ecosystem, water quality, health, and safety risks. The conventional process of classifying algae is difficult, tedious, and time-consuming. Recently various computer vision techniques have been used to classify algae to overcome challenges and automate the process of classification. This paper presents a review of research done on image classification for microorganism algae using machine learning and deep learning techniques. The paper focuses on three important research questions to highlight the challenges of classifying microalgae. A systematic literature review or SLR has been conducted to determine how deep learning and machine learning have improved and enhanced automatic microalgae classification rather than manual classification. 51 articles have been included from well-known databases. The outcome of this SLR is beneficial due to the detailed analysis and comprehensive overview of the algorithms and the architectures and information about the dataset used in each included article. The future work focuses on getting a large dataset with high resolution, trying different methods to manage imbalance problems, and giving more attention to the fusion of deep learning techniques and traditional machine learning techniques

InsectCV: a system for insect detection in the lab from trap images.

Advances in artificial intelligence, computer vision, and high-performance computing have enabled the creation of efficient solutions to monitor pests and identify plant diseases. In this context, we present InsectCV, a system for automatic insect detection in the lab from scanned trap images. This study considered the use of Moericke-type traps to capture insects in outdoor environments. Each sample can contain hundreds of insects of interest, such as aphids, parasitoids, thrips, and flies. The presence of debris, superimposed objects, and insects in varied poses is also common. To develop this solution, we used a set of 209 grayscale images containing 17,908 labeled insects. We applied the Mask R-CNN method to generate the model and created three web services for the image inference. The model training contemplated transfer learning and data augmentation techniques. This approach defined two new parameters to adjust the ratio of false positive by class, and change the lengths of the anchor side of the Region Proposal Network, improving the accuracy in the detection of small objects. The model validation used a total of 580 images obtained from field exposed traps located at Coxilha, and Passo Fundo, north of Rio Grande do Sul State, during wheat crop season in 2019 and 2020. Compared to manual counting, the coefficients of determination (R2&#8239;=&#8239;0.81 for aphids and R2&#8239;=&#8239;0.78 for parasitoids) show a good-fitting model to identify the fluctuation of population levels for these insects, presenting tiny deviations of the growth curve in the initial phases, and in the maintenance of the curve shape. In samples with hundreds of insects and debris that generate more connections or overlaps, model performance was affected due to the increase in false negatives. Comparative tests between InsectCV and manual counting performed by a specialist suggest that the system is sufficiently accurate to guide warning systems for integrated pest management of aphids. We also discussed the implications of adopting this tool and the gaps that require further development. Keywords: Convolutional neural network; Mask r-cnn; Object detection; Pest detection; Aphids; Warning system

Semantic versus instance segmentation in microscopic algae detection

15 pags., 21 figs., 4 tabs.Microscopic algae segmentation, specifically of diatoms, is an essential procedure for water quality assessment. The segmentation of these microalgae is still a challenge for computer vision. This paper addresses for the first time this problem using deep learning approaches to predict exactly those pixels that belong to each class, i.e., diatom and non diatom. A comparison between semantic segmentation and instance segmentation is carried out, and the performance of these methods is evaluated in the presence of different types of noise. The trained models are then evaluated with the same raw images used for manual diatom identification. A total of 126 images of the entire field of view at 60x magnification, with a size of 2592x1944 pixels, are analyzed. The images contain 10 different taxa plus debris and fragments. The best results were obtained with instance segmentation achieving an average precision of 85% with 86% sensitivity and 91% specificity (up to 92% precision with 98%, both sensitivity and specificity for some taxa). Semantic segmentation was able to improve the average sensitivity up to 95% but decreasing the specificity down to 60% and precision to 57%. Instance segmentation was also able to properly separate diatoms when overlap occurs, which helps estimate the number of diatoms, a key requirement for water quality grading.The authors received financial support from the Spanish Government under the Aqualitas-retos project (Ref. CTM2014-51907-C2-2-R-MINECO)

Intelligent Energy-Savings and Process Improvement Strategies in Energy-Intensive Industries

S tím, jak se neustále vyvíjejí nové technologie pro energeticky náročná průmyslová odvětví, stávající zařízení postupně zaostávají v efektivitě a produktivitě. Tvrdá konkurence na trhu a legislativa v oblasti životního prostředí nutí tato tradiční zařízení k ukončení provozu a k odstavení. Zlepšování procesu a projekty modernizace jsou zásadní v udržování provozních výkonů těchto zařízení. Současné přístupy pro zlepšování procesů jsou hlavně: integrace procesů, optimalizace procesů a intenzifikace procesů. Obecně se v těchto oblastech využívá matematické optimalizace, zkušeností řešitele a provozní heuristiky. Tyto přístupy slouží jako základ pro zlepšování procesů. Avšak, jejich výkon lze dále zlepšit pomocí moderní výpočtové inteligence. Účelem této práce je tudíž aplikace pokročilých technik umělé inteligence a strojového učení za účelem zlepšování procesů v energeticky náročných průmyslových procesech. V této práci je využit přístup, který řeší tento problém simulací průmyslových systémů a přispívá následujícím: (i)Aplikace techniky strojového učení, která zahrnuje jednorázové učení a neuro-evoluci pro modelování a optimalizaci jednotlivých jednotek na základě dat. (ii) Aplikace redukce dimenze (např. Analýza hlavních komponent, autoendkodér) pro vícekriteriální optimalizaci procesu s více jednotkami. (iii) Návrh nového nástroje pro analýzu problematických částí systému za účelem jejich odstranění (bottleneck tree analysis – BOTA). Bylo také navrženo rozšíření nástroje, které umožňuje řešit vícerozměrné problémy pomocí přístupu založeného na datech. (iv) Prokázání účinnosti simulací Monte-Carlo, neuronové sítě a rozhodovacích stromů pro rozhodování při integraci nové technologie procesu do stávajících procesů. (v) Porovnání techniky HTM (Hierarchical Temporal Memory) a duální optimalizace s několika prediktivními nástroji pro podporu managementu provozu v reálném čase. (vi) Implementace umělé neuronové sítě v rámci rozhraní pro konvenční procesní graf (P-graf). (vii) Zdůraznění budoucnosti umělé inteligence a procesního inženýrství v biosystémech prostřednictvím komerčně založeného paradigmatu multi-omics.Zlepšení průmyslových procesů, Model založený na datech, Optimalizace procesu, Strojové učení, Průmyslové systémy, Energeticky náročná průmyslová odvětví, Umělá inteligence.