Segmentation of brain MR images with directional weighted optimized fuzzy C-means clustering

One of the fundamental and significant distinctiveness of an image is that, adjacent pixels are extremely correlated. The spatial information in the image improves the quality of clustering which is not utilized in the standard Fuzzy C-Means (FCM). FCM algorithm is not robust against noise. In this paper, we proposed an enhanced version of Fuzzy C-Means algorithm that incorporates spatial information into the membership function for clustering of brain MR images. The modified Fuzzy C-Means finds optimal clusters in an automatic way with the help of some cluster validity criteria. Additionally, spatial weighted information is incorporated in the spatial FCM. The spatial function is the weighted summation of the membership function in the neighborhood of each pixel under consideration. The advantages of this new method are: (a) it yields regions more homogeneous than those of other methods and (b) it removes noisy spots. It is less sensitive to noise as compared to other techniques. We tested our method on various brain MR images, and the technique has proved as a powerful method in the segmentation of noisy images

A New Fuzzy C Means for Brain Image Segmentation Using Anisotropic Diffused Regularization

ABSTRACT Medical Imaging is the technique and a process used to create images of the human body for clinical or medical science. Magnetic Resonance (MR) Brain image segmentation plays an important role in neurosurgical planning and clinical diagnosis. MR image is segmented using Fuzzy C means (FCM) method, the objective function of FCM is modified by a regularizing function called Total Variation (TV)FCM. The proposed robust image regularization Anisotropic Diffusion Total Variation (ADTV) regularization method focuses on smoothing the images and reducing the steps by reinterpreting the traditional TV regularization. The method preserves the discontinuities and also continues to smooth along line like features in the MR images and the comparison of proposed scheme with classical TV demonstrates the performance improvement. The method shows the consistent improvement in the reconstruction of images. The method is combined with the FCM and the results of segmentation are improved

Cancer diagnosis using deep learning: A bibliographic review

In this paper, we first describe the basics of the field of cancer diagnosis, which includes steps of cancer diagnosis followed by the typical classification methods used by doctors, providing a historical idea of cancer classification techniques to the readers. These methods include Asymmetry, Border, Color and Diameter (ABCD) method, seven-point detection method, Menzies method, and pattern analysis. They are used regularly by doctors for cancer diagnosis, although they are not considered very efficient for obtaining better performance. Moreover, considering all types of audience, the basic evaluation criteria are also discussed. The criteria include the receiver operating characteristic curve (ROC curve), Area under the ROC curve (AUC), F1 score, accuracy, specificity, sensitivity, precision, dice-coefficient, average accuracy, and Jaccard index. Previously used methods are considered inefficient, asking for better and smarter methods for cancer diagnosis. Artificial intelligence and cancer diagnosis are gaining attention as a way to define better diagnostic tools. In particular, deep neural networks can be successfully used for intelligent image analysis. The basic framework of how this machine learning works on medical imaging is provided in this study, i.e., pre-processing, image segmentation and post-processing. The second part of this manuscript describes the different deep learning techniques, such as convolutional neural networks (CNNs), generative adversarial models (GANs), deep autoencoders (DANs), restricted Boltzmann’s machine (RBM), stacked autoencoders (SAE), convolutional autoencoders (CAE), recurrent neural networks (RNNs), long short-term memory (LTSM), multi-scale convolutional neural network (M-CNN), multi-instance learning convolutional neural network (MIL-CNN). For each technique, we provide Python codes, to allow interested readers to experiment with the cited algorithms on their own diagnostic problems. The third part of this manuscript compiles the successfully applied deep learning models for different types of cancers. Considering the length of the manuscript, we restrict ourselves to the discussion of breast cancer, lung cancer, brain cancer, and skin cancer. The purpose of this bibliographic review is to provide researchers opting to work in implementing deep learning and artificial neural networks for cancer diagnosis a knowledge from scratch of the state-of-the-art achievements

Automated Segmentation of Cerebral Aneurysm Using a Novel Statistical Multiresolution Approach

Cerebral Aneurysm (CA) is a vascular disease that threatens the lives of many adults. It a ects almost 1:5 - 5% of the general population. Sub- Arachnoid Hemorrhage (SAH), resulted by a ruptured CA, has high rates of morbidity and mortality. Therefore, radiologists aim to detect it and diagnose it at an early stage, by analyzing the medical images, to prevent or reduce its damages. The analysis process is traditionally done manually. However, with the emerging of the technology, Computer-Aided Diagnosis (CAD) algorithms are adopted in the clinics to overcome the traditional process disadvantages, as the dependency of the radiologist's experience, the inter and intra observation variability, the increase in the probability of error which increases consequently with the growing number of medical images to be analyzed, and the artifacts added by the medical images' acquisition methods (i.e., MRA, CTA, PET, RA, etc.) which impedes the radiologist' s work. Due to the aforementioned reasons, many research works propose di erent segmentation approaches to automate the analysis process of detecting a CA using complementary segmentation techniques; but due to the challenging task of developing a robust reproducible reliable algorithm to detect CA regardless of its shape, size, and location from a variety of the acquisition methods, a diversity of proposed and developed approaches exist which still su er from some limitations. This thesis aims to contribute in this research area by adopting two promising techniques based on the multiresolution and statistical approaches in the Two-Dimensional (2D) domain. The rst technique is the Contourlet Transform (CT), which empowers the segmentation by extracting features not apparent in the normal image scale. While the second technique is the Hidden Markov Random Field model with Expectation Maximization (HMRF-EM), which segments the image based on the relationship of the neighboring pixels in the contourlet domain. The developed algorithm reveals promising results on the four tested Three- Dimensional Rotational Angiography (3D RA) datasets, where an objective and a subjective evaluation are carried out. For the objective evaluation, six performance metrics are adopted which are: accuracy, Dice Similarity Index (DSI), False Positive Ratio (FPR), False Negative Ratio (FNR), speci city, and sensitivity. As for the subjective evaluation, one expert and four observers with some medical background are involved to assess the segmentation visually. Both evaluations compare the segmented volumes against the ground truth data

Parameter optimization for local polynomial approximation based intersection confidence interval filter using genetic algorithm: an application for brain MRI image de-noising

Magnetic resonance imaging (MRI) is extensively exploited for more accuratepathological changes as well as diagnosis. Conversely, MRI suffers from variousshortcomings such as ambient noise from the environment, acquisition noise from theequipment, the presence of background tissue, breathing motion, body fat, etc.Consequently, noise reduction is critical as diverse types of the generated noise limit the efficiency of the medical image diagnosis. Local polynomial approximation basedintersection confidence interval (LPA-ICI) filter is one of the effective de-noising filters.This filter requires an adjustment of the ICI parameters for efficient window size selection.From the wide range of ICI parametric values, finding out the best set of tunes values is itselfan optimization problem. The present study proposed a novel technique for parameteroptimization of LPA-ICI filter using genetic algorithm (GA) for brain MR imagesde-noising. The experimental results proved that the proposed method outperforms theLPA-ICI method for de-noising in terms of various performance metrics for different noisevariance levels. Obtained results reports that the ICI parameter values depend on the noisevariance and the concerned under test image

An investigation of the breast cancer classification using various machine learning techniques

It is an extremely cumbersome process to predict a disease based on the visual diagnosis of cell type with precision or accuracy, especially when multiple features are associated. Cancer is one such example where the phenomenon is very complex and also multiple features of cell types are involved. Breast cancer is a disease mostly affects female population and the number of affected people is highest among all cancer types in India. In the present investigation, various pattern recognition techniques were used for the classification of breast cancer using cell image processing. Under these pattern recognition techniques, cell image segmentation, texture based image feature extraction and subsequent classification of breast cancer cells was successfully performed. When four different machine learning techniques: Kth nearest neighbor (KNN), Artificial Neural Network ( ANN), Support Vector Machine (SVM) and Least Square Support Vector Machine (LS-SVM) was used to classify 81 cell images, it was observed from the results that the LS-SVM with both Radial Basis Function (RBF) and linear kernel classifiers demonstrated the highest classification rate of 95.3488% among four other classifiers while SVM with linear kernel resulted a classification rate of 93.02% which was close to LSSVM classifier. Thus, it was demonstrated that the LS-SVM classifier showed accuracy higher than other classifiers reported so far. Moreover, our classifier can classify the disease in a short period of time using only cell images unlike other approaches reported so far