Alpha Entanglement Codes: Practical Erasure Codes to Archive Data in Unreliable Environments

Data centres that use consumer-grade disks drives and distributed peer-to-peer systems are unreliable environments to archive data without enough redundancy. Most redundancy schemes are not completely effective for providing high availability, durability and integrity in the long-term. We propose alpha entanglement codes, a mechanism that creates a virtual layer of highly interconnected storage devices to propagate redundant information across a large scale storage system. Our motivation is to design flexible and practical erasure codes with high fault-tolerance to improve data durability and availability even in catastrophic scenarios. By flexible and practical, we mean code settings that can be adapted to future requirements and practical implementations with reasonable trade-offs between security, resource usage and performance. The codes have three parameters. Alpha increases storage overhead linearly but increases the possible paths to recover data exponentially. Two other parameters increase fault-tolerance even further without the need of additional storage. As a result, an entangled storage system can provide high availability, durability and offer additional integrity: it is more difficult to modify data undetectably. We evaluate how several redundancy schemes perform in unreliable environments and show that alpha entanglement codes are flexible and practical codes. Remarkably, they excel at code locality, hence, they reduce repair costs and become less dependent on storage locations with poor availability. Our solution outperforms Reed-Solomon codes in many disaster recovery scenarios.Comment: The publication has 12 pages and 13 figures. This work was partially supported by Swiss National Science Foundation SNSF Doc.Mobility 162014, 2018 48th Annual IEEE/IFIP International Conference on Dependable Systems and Networks (DSN

A Peer-to-Peer Middleware Framework for Resilient Persistent Programming

The persistent programming systems of the 1980s offered a programming model that integrated computation and long-term storage. In these systems, reliable applications could be engineered without requiring the programmer to write translation code to manage the transfer of data to and from non-volatile storage. More importantly, it simplified the programmer's conceptual model of an application, and avoided the many coherency problems that result from multiple cached copies of the same information. Although technically innovative, persistent languages were not widely adopted, perhaps due in part to their closed-world model. Each persistent store was located on a single host, and there were no flexible mechanisms for communication or transfer of data between separate stores. Here we re-open the work on persistence and combine it with modern peer-to-peer techniques in order to provide support for orthogonal persistence in resilient and potentially long-running distributed applications. Our vision is of an infrastructure within which an application can be developed and distributed with minimal modification, whereupon the application becomes resilient to certain failure modes. If a node, or the connection to it, fails during execution of the application, the objects are re-instantiated from distributed replicas, without their reference holders being aware of the failure. Furthermore, we believe that this can be achieved within a spectrum of application programmer intervention, ranging from minimal to totally prescriptive, as desired. The same mechanisms encompass an orthogonally persistent programming model. We outline our approach to implementing this vision, and describe current progress.Comment: Submitted to EuroSys 200

Scalable Persistent Storage for Erlang

The many core revolution makes scalability a key property. The RELEASE project aims to improve the scalability of Erlang on emergent commodity architectures with 100,000 cores. Such architectures require scalable and available persistent storage on up to 100 hosts. We enumerate the requirements for scalable and available persistent storage, and evaluate four popular Erlang DBMSs against these requirements. This analysis shows that Mnesia and CouchDB are not suitable persistent storage at our target scale, but Dynamo-like NoSQL DataBase Management Systems (DBMSs) such as Cassandra and Riak potentially are. We investigate the current scalability limits of the Riak 1.1.1 NoSQL DBMS in practice on a 100-node cluster. We establish for the first time scientifically the scalability limit of Riak as 60 nodes on the Kalkyl cluster, thereby confirming developer folklore. We show that resources like memory, disk, and network do not limit the scalability of Riak. By instrumenting Erlang/OTP and Riak libraries we identify a specific Riak functionality that limits scalability. We outline how later releases of Riak are refactored to eliminate the scalability bottlenecks. We conclude that Dynamo-style NoSQL DBMSs provide scalable and available persistent storage for Erlang in general, and for our RELEASE target architecture in particular

A Taxonomy of Data Grids for Distributed Data Sharing, Management and Processing

Data Grids have been adopted as the platform for scientific communities that need to share, access, transport, process and manage large data collections distributed worldwide. They combine high-end computing technologies with high-performance networking and wide-area storage management techniques. In this paper, we discuss the key concepts behind Data Grids and compare them with other data sharing and distribution paradigms such as content delivery networks, peer-to-peer networks and distributed databases. We then provide comprehensive taxonomies that cover various aspects of architecture, data transportation, data replication and resource allocation and scheduling. Finally, we map the proposed taxonomy to various Data Grid systems not only to validate the taxonomy but also to identify areas for future exploration. Through this taxonomy, we aim to categorise existing systems to better understand their goals and their methodology. This would help evaluate their applicability for solving similar problems. This taxonomy also provides a "gap analysis" of this area through which researchers can potentially identify new issues for investigation. Finally, we hope that the proposed taxonomy and mapping also helps to provide an easy way for new practitioners to understand this complex area of research.Comment: 46 pages, 16 figures, Technical Repor

Replication and availability in decentralised online social networks

A thesis submitted to the University of Bedfordshire in partial fulfilment of the requirements for the degree of Master of PhilosophyDuring the last few years’ online social networks (OSNs) have become increasingly popular among all age groups and professions but this has raised a number of issues around users’ privacy and security. To address these issues a number of attempts have been made in the literature to create the next generation of OSNs built on decentralised architectures. Maintaining high data availability in decentralised OSNs is a challenging task as users themselves are responsible for keeping their profiles available either by staying online for longer periods of time or by choosing trusted peers that can keep their data available on their behalf. The major findings of this research include algorithmically determining the users’ availability and the minimum number of replicas required to achieve the same availability as all mirror nodes combined. The thesis also investigates how the users’ availability, replication degree and the update propagation delay changes as we alter the number of mirror nodes their online patterns, number of sessions and session duration. We found as we increase the number of mirror nodes the availability increases and becomes stable after a certain point which may vary from node to node as it directly depends on the node’s number of mirror nodes and their online patterns. Moreover, we also found the minimum number of replicas required to achieve the same availability as all mirror nodes combined and update propagation delay directly depends on mirror nodes’ number of sessions and session duration. Furthermore, we also found as we increase the number of sessions with reduced session lengths the update propagation delay between the mirror nodes starts to decrease. Thus resulting in spreading the updates faster as compared to mirror nodes with fewer sessions but of longer durations

Automating Fault Tolerance in High-Performance Computational Biological Jobs Using Multi-Agent Approaches

Background: Large-scale biological jobs on high-performance computing systems require manual intervention if one or more computing cores on which they execute fail. This places not only a cost on the maintenance of the job, but also a cost on the time taken for reinstating the job and the risk of losing data and execution accomplished by the job before it failed. Approaches which can proactively detect computing core failures and take action to relocate the computing core's job onto reliable cores can make a significant step towards automating fault tolerance. Method: This paper describes an experimental investigation into the use of multi-agent approaches for fault tolerance. Two approaches are studied, the first at the job level and the second at the core level. The approaches are investigated for single core failure scenarios that can occur in the execution of parallel reduction algorithms on computer clusters. A third approach is proposed that incorporates multi-agent technology both at the job and core level. Experiments are pursued in the context of genome searching, a popular computational biology application. Result: The key conclusion is that the approaches proposed are feasible for automating fault tolerance in high-performance computing systems with minimal human intervention. In a typical experiment in which the fault tolerance is studied, centralised and decentralised checkpointing approaches on an average add 90% to the actual time for executing the job. On the other hand, in the same experiment the multi-agent approaches add only 10% to the overall execution time.Comment: Computers in Biology and Medicin

Chapter The EU Research Project PLANET

Renewable energy sources offer unprecedented opportunities to reduce greenhouse gas emissions. But some challenges remain to be solved before their full benefits can be reaped. The main one relates to the intermittency of their electricity supply which can lead to grid problems such as congestion and imbalance between generation and demand. Energy conversion and storage has been touted as a very promising solution to all aforementioned issues. PLANET will develop a holistic decision support system for the optimal orchestration of the different energy networks for aggregators and balance responsible parties, policy makers and network operators. It will aid them to leverage innovative energy conversion in alternative carriers and storage technologies in order to explore, identify, evaluate and quantitatively assess optimal grid planning and management strategies for future energy scenarios targetting full energy system decarbonization. Moreover, an analysis of the possible synergies between electricity, gas and heat networks will be carried out by creating simulation models for the integration between energy networks and conversion/storage technologies, for example power-to-gas, power-to-heat and virtual thermal energy storage. Application of the developed tools in two different test cases in Italy and France will showcase their benefits and reveal potential grid stability issues and effective countermeasures