A hybrid unsupervised approach toward EEG epileptic spikes detection

Epileptic spikes are complementary sources of information in EEG to diagnose and localize the origin of epilepsy. However, not only is visual inspection of EEG labor intensive, time consuming, and prone to human error, but it also needs long-term training to acquire the level of skill required for identifying epileptic discharges. Therefore, computer-aided approaches were employed for the purpose of saving time and increasing the detection and source localization accuracy. One of the most important artifacts that may be confused as an epileptic spike, due to morphological resemblance, is eye blink. Only a few studies consider removal of this artifact prior to detection, and most of them used either visual inspection or computer-aided approaches, which need expert supervision. Consequently, in this paper, an unsupervised and EEG-based system with embedded eye blink artifact remover is developed to detect epileptic spikes. The proposed system includes three stages: eye blink artifact removal, feature extraction, and classification. Wavelet transform was employed for both artifact removal and feature extraction steps, and adaptive neuro-fuzzy inference system for classification purpose. The proposed method is verified using a publicly available EEG dataset. The results show the efficiency of this algorithm in detecting epileptic spikes using low-resolution EEG with least computational complexity, highest sensitivity, and lesser human interaction compared to similar studies. Moreover, since epileptic spike detection is a vital component of epilepsy source localization, therefore this algorithm can be utilized for EEG-based pre-surgical evaluation of epilepsy

A Removal of Eye Movement and Blink Artifacts from EEG Data Using Morphological Component Analysis

EEG signals contain a large amount of ocular artifacts with different time-frequency properties mixing together in EEGs of interest. The artifact removal has been substantially dealt with by existing decomposition methods known as PCA and ICA based on the orthogonality of signal vectors or statistical independence of signal components. We focused on the signal morphology and proposed a systematic decomposition method to identify the type of signal components on the basis of sparsity in the time-frequency domain based on Morphological Component Analysis (MCA), which provides a way of reconstruction that guarantees accuracy in reconstruction by using multiple bases in accordance with the concept of “dictionary.” MCA was applied to decompose the real EEG signal and clarified the best combination of dictionaries for this purpose. In our proposed semirealistic biological signal analysis with iEEGs recorded from the brain intracranially, those signals were successfully decomposed into original types by a linear expansion of waveforms, such as redundant transforms: UDWT, DCT, LDCT, DST, and DIRAC. Our result demonstrated that the most suitable combination for EEG data analysis was UDWT, DST, and DIRAC to represent the baseline envelope, multifrequency wave-forms, and spiking activities individually as representative types of EEG morphologies

Electroencephalographic Signal Processing and Classification Techniques for Noninvasive Motor Imagery Based Brain Computer Interface

In motor imagery (MI) based brain-computer interface (BCI), success depends on reliable processing of the noisy, non-linear, and non-stationary brain activity signals for extraction of features and effective classification of MI activity as well as translation to the corresponding intended actions. In this study, signal processing and classification techniques are presented for electroencephalogram (EEG) signals for motor imagery based brain-computer interface. EEG signals have been acquired placing the electrodes following the international 10-20 system. The acquired signals have been pre-processed removing artifacts using empirical mode decomposition (EMD) and two extended versions of EMD, ensemble empirical mode decomposition (EEMD), and multivariate empirical mode decomposition (MEMD) leading to better signal to noise ratio (SNR) and reduced mean square error (MSE) compared to independent component analysis (ICA). EEG signals have been decomposed into independent mode function (IMFs) that are further processed to extract features like sample entropy (SampEn) and band power (BP). The extracted features have been used in support vector machines to characterize and identify MI activities. EMD and its variants, EEMD, MEMD have been compared with common spatial pattern (CSP) for different MI activities. SNR values from EMD, EEMD and MEMD (4.3, 7.64, 10.62) are much better than ICA (2.1) but accuracy of MI activity identification is slightly better for ICA than EMD using BP and SampEn. Further work is outlined to include more features with larger database for better classification accuracy

Evaluation Of Automated Eye Blink Artefact Removal Using Stacked Dense Autoencoder

The presence of artefacts in Electroencephalograph (EEG) signals can have a considerable impact on the information they portray. In this comparative study, the automated removal of eye blink artefacts using the constrained latent representation of a stacked dense autoencoders (SDAE) and comparing its ability to that of the manual independent component analysis (ICA) approach was evaluated. A comparative evaluation of 5 stacked dense autoencoder architectures lead to a chosen architecture for which the ability to automatically detect and remove eye blink artefacts were both statistically and humanistically evaluated. The ability of the stacked dense autoencoder was statistically evaluated with the manual approach of ICA using the correlation coefficient, a comparative affect on the SNR using both approaches and a humanistic evaluation using visual inspections of the components of the stacked dense autoencoder reconstruction to that of the post ICA reconstruction where an inverse RMSE allowed for a further statistical evaluation of this comparison. It was found that the stacked dense autoencoder was unable to reconstruct random signal segments in any meaningful capacity when compared to that of ICA

Signal Processing Using Non-invasive Physiological Sensors

Non-invasive biomedical sensors for monitoring physiological parameters from the human body for potential future therapies and healthcare solutions. Today, a critical factor in providing a cost-effective healthcare system is improving patients' quality of life and mobility, which can be achieved by developing non-invasive sensor systems, which can then be deployed in point of care, used at home or integrated into wearable devices for long-term data collection. Another factor that plays an integral part in a cost-effective healthcare system is the signal processing of the data recorded with non-invasive biomedical sensors. In this book, we aimed to attract researchers who are interested in the application of signal processing methods to different biomedical signals, such as an electroencephalogram (EEG), electromyogram (EMG), functional near-infrared spectroscopy (fNIRS), electrocardiogram (ECG), galvanic skin response, pulse oximetry, photoplethysmogram (PPG), etc. We encouraged new signal processing methods or the use of existing signal processing methods for its novel application in physiological signals to help healthcare providers make better decisions

脳波信号解析に注目したノイズ除去、特徴抽出、実験観測応用を最適化する数理基盤に関する研究

Electroencephalography (EEG) data inevitably contains a large amount of noise particularly from ocular potentials in tasks with eye-movements and eye-blink, known as electrooculography (EOG) artifact, which has been a crucial issue in the braincomputer- interface (BCI) study. The eye-movements and eye-blinks have different time-frequency properties mixing together in EEGs of interest. This time-frequency characteristic has been substantially dealt with past proposed denoising algorithms relying on the consistent assumption based on the single noise component model. However, the traditional model is not simply applicable for biomedical signals consist of multiple signal components, such as weak EEG signals easily recognized as a noise because of the signal amplitude with respect to the EOG signal. In consideration of the realistic signal contamination, we newly designed the EEG-EOG signal contamination model for quantitative validations of the artifact removal from EEGs, and then proposed the two-stage wavelet shrinkage method with the undecimated wavelet decomposition (UDWT), which is suitable for the signal structure. The features of EEG-EOG signal has been extracted with existing decomposition methods known as Principal Component Analysis (PCA), Independent Component Analysis (ICA) based on a consistent assumption of the orthogonality of signal vectors or statistical independence of signal components. In the viewpoint of the signal morphology such as spiking, waves and signal pattern transitions, A systematic decomposition method is proposed to identify the type of signal components or morphology on the basis of sparsity in time-frequency domain. Morphological Component Analysis (MCA) is extended the traditional concept of signal decomposition including Fourier and wavelet transforms and provided a way of reconstruction that guarantees accuracy in reconstruction by using multiple bases being independent of each other and uniqueness representation, called the concept of “dictionary”. MCA is applied to decompose the real EEG signal and clarified the best combination of dictionaries for the purpose. In this proposed semi-realistic biological signal analysis, target EEG data was prepared as mixture signals of artificial eye movements and blinks and iEEG recorded from electrodes embedded into the brain intracranially and then those signals were successfully decomposed into original types by a linear expansion of waveforms such as redundant transforms: UDWT, DCT,LDCT, DST and DIRAC. The result demonstrated that the most suitable combination for EEG data analysis was UDWT, DST and DIRAC to represent the baseline envelop, multi frequency wave forms and spiking activities individually as representative types of EEG morphologies. MCA proposed method is used in negative-going Bereitschaftspotential (BP). It is associated with the preparation and execution of voluntary movement. Thus far, the BP for simple movements involving either the upper or lower body segment has been studied. However, the BP has not yet been recorded during sit-to-stand movements, which use the upper and lower body segments. Electroencephalograms were recorded during movement. To detect the movement of the upper body segment, a gyro sensor was placed on the back, and to detect the movement of the lower body segment, an electromyogram (EMG) electrode was placed on the surface of the hamstrings and quadriceps. Our study revealed that a negative-going BP was evoked around -3 to -2 seconds before the onset of the upper body movement in the sit-to-stand movement in response to the start cue. The BP had a negative peak before the onset of the movement. The potential was followed by premotor positivity, a motor-related potential, and a reafferent potential. The BP for the sit-to-stand movement had a steeper negative slope (-0.8 to -0.001 seconds) just before the onset of the upper body movement. The slope correlated with the gyro peak and the max amplitude of hamstrings EMG. A BP negative peak value was correlated with the max amplitude of the hamstring EMG. These results suggested that the observed BP is involved in the preparation/execution for a sit-to-stand movement using the upper and lower body. In summary, this thesis is help to pave the practical approach of real time analysis of desired EEG signal of interest toward the implementation of rehabilitation device which may be used for motor disabled people. We also pointed out the EEG-EOG contamination model that helps in removal of the artifacts and explicit dictionaries are representing the EEG morphologies.九州工業大学博士学位論文 学位記番号:生工博甲第290号 学位授与年月日:平成29年3月24日1 Introduction|2 Research Background and Preliminaries|3 Introduction of Morphological Component Analysis|4 Two-Stage Undecimated Wavelet Shrinkage Method|5 Morphologically Decomposition of EEG Signals|6 Bereitschaftspotential for Rise to Stand-Up Behavior九州工業大学平成28年

Detection and removal of eyeblink artifacts from EEG using wavelet analysis and independent component analysis

Electrical signals generated by brain activity that are measured by the electroencephalogram can be distorted by electrical activity originating from eyeblinks and eye movements. This thesis proposes a new technique to identify and remove eyeblink artifacts from EEG data. An algorithm using a combination of wavelet analysis and independent component analysis (ICA) is implemented to detect the temporal location of the eyeblink artifact and eliminate it without compromising the integrity of the primary EEG data. The discrete wavelet transform is performed on 10 second epochs of data to detect the occurrence of ocular artifact. ICA is used to separate out the independent components within the data and the temporal locations of the eyeblink are used to remove the artifact and reconstruct the EEG data without that source of distortion. The results obtained indicate that the technique implemented may be robust enough to effectively process EEG data and is capable of removing eyeblink artifacts successfully when they are prominent and the data does not contain a great deal of movement artifact. The results show an 88.68% detection rate, a false positive rate of 4.03%, and an 87.23% removal rate for all eyeblinks that were accurately detected. The statistics obtained compared favorably with work done by others in this field of investigation

Reading the brain’s personality: using machine learning to investigate the relationships between EEG and depressivity

Electroencephalography (EEG) measures electrical signals on the scalp and can give information about processes near the surface of the brain (cortex). The goal of our research was to create models that predict depressivity (mapping to personality in general, not just sickness) and to find potential biomarkers in EEG data. First, to provide our models with cleaner EEG data, we designed a novel single-channel physiology-based eye blink artefact removal method and a mains power noise removal method. Then, we assessed two main machine learning model types (classification- and regression-based) with a total of eighteen sub-types to predict the depressivity of participants. The models were generated by combining four signal processing techniques with a) three classification techniques, and b) three regression techniques. The experimental results showed that both types of models perform well in depressivity prediction and one regression-based model (Reg-FFT-LSBoost) showed a significant depressivity prediction performance, especially for female group. More importantly, we found that a specific EEG frequency band (the gamma band) made major contributions to depressivity prediction. Apart from that, the alpha and beta band may make modest contributions. Specific locations (T7, T8, and C3) made major contributions to depressivity prediction. Frontal locations may also have some influence. We also found that the combination of both eye states’ EEG data showed a better depressivity prediction ability. Compared to the eyes closed data, the EEG data obtained from the state of eyes open were more suitable for assessing depressivity. In brief, the outcomes of this research provided the possibilities for translating the EEG data for depressivity measure. Furthermore, there are possibilities to extend the research to apply to other mental disorders’ prediction, such as anxiety