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Ensuring Access to Safe and Nutritious Food for All Through the Transformation of Food Systems
One Small Step for Generative AI, One Giant Leap for AGI: A Complete Survey on ChatGPT in AIGC Era
OpenAI has recently released GPT-4 (a.k.a. ChatGPT plus), which is
demonstrated to be one small step for generative AI (GAI), but one giant leap
for artificial general intelligence (AGI). Since its official release in
November 2022, ChatGPT has quickly attracted numerous users with extensive
media coverage. Such unprecedented attention has also motivated numerous
researchers to investigate ChatGPT from various aspects. According to Google
scholar, there are more than 500 articles with ChatGPT in their titles or
mentioning it in their abstracts. Considering this, a review is urgently
needed, and our work fills this gap. Overall, this work is the first to survey
ChatGPT with a comprehensive review of its underlying technology, applications,
and challenges. Moreover, we present an outlook on how ChatGPT might evolve to
realize general-purpose AIGC (a.k.a. AI-generated content), which will be a
significant milestone for the development of AGI.Comment: A Survey on ChatGPT and GPT-4, 29 pages. Feedback is appreciated
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Differential responses in some quinoa genotypes of a consortium of beneficial endophytic bacteria against bacterial leaf spot disease
Many effective plant-microbe interactions lead to biological changes that can stimulate plant growth and production. This study evaluated the effect of the interaction between quinoa (Chenopodium quinoa Willd.) and endophytic bacterial strains on differential responses under biotic stress. Four strains of endophytic bacteria were used to inoculate three quinoa genotypes. Endophytic bacteria, isolated from the endosphere of healthy genotypes of quinoa plants, were used to evaluate their biocontrol activity against Pseudomonas syringae on quinoa plants, which causes leaf spot disease, depending on some different parameters. Quinoa genotype plants were treated with four treatments: pathogenic bacteria only (T1), internal bacteria only (T2), pathogenic bacteria + endogenous bacteria (T3), and untreated as the control (T4). The results indicated that there was a significant difference between chlorophyll content index of infected plants without bioagent (untreated) compared to plants bio-inoculated with endophytic bacteria. The highest mean disease incidence was on the plants without bacterial inoculum (90, 80, and 100%) for quinoa genotypes G1, G2, and G3, respectively. The results showed that there were significant differences in the weight of grains/plant, as the value ranged from 8.1 to 13.3 g when treated with pathogens (T1) compared to the treatment with pathogens and endogenous bacteria (T3), which ranged from 11.7 to 18.6 g/plant. Decreases in total aromatic amino acids appeared due to the pathogen infection, by 6.3, 22.8, and 24.1% (compared to the control) in G1, G2, and G3, respectively. On the other hand, genotype G3 showed the highest response in the levels of total aromatic and total neutral amino acids. The endophytic strains promoted quinoa seedling growth mainly by improving nutrient efficiency. This improvement could not be explained by their ability to induce the production of amino acids, showing that complex interactions might be associated with enhancement of quinoa seedling performance by endophytic bacteria. The endophytic bacterial strains were able to reduce the severity of bacterial leaf spot disease by 30, 40, and 50% in quinoa genotypes G1, G2, and G3, respectively, recording significant differences compared to the negative control. The results indicated that, G1 genotype was superior in different performance indicators (pathogen tolerance index, yield injury %, superiority measure and relative performance) for grain weight/plant under pathogen infection condition when treated with endophyte bacteria. Based on this study, these bacterial strains can be used as a biotechnology tool in quinoa seedling production and biocontrol to diminish the severity of bacterial leaf spot disease
Bayesian networks for disease diagnosis: What are they, who has used them and how?
A Bayesian network (BN) is a probabilistic graph based on Bayes' theorem,
used to show dependencies or cause-and-effect relationships between variables.
They are widely applied in diagnostic processes since they allow the
incorporation of medical knowledge to the model while expressing uncertainty in
terms of probability. This systematic review presents the state of the art in
the applications of BNs in medicine in general and in the diagnosis and
prognosis of diseases in particular. Indexed articles from the last 40 years
were included. The studies generally used the typical measures of diagnostic
and prognostic accuracy: sensitivity, specificity, accuracy, precision, and the
area under the ROC curve. Overall, we found that disease diagnosis and
prognosis based on BNs can be successfully used to model complex medical
problems that require reasoning under conditions of uncertainty.Comment: 22 pages, 5 figures, 1 table, Student PhD first pape
Neural Architecture Search: Insights from 1000 Papers
In the past decade, advances in deep learning have resulted in breakthroughs
in a variety of areas, including computer vision, natural language
understanding, speech recognition, and reinforcement learning. Specialized,
high-performing neural architectures are crucial to the success of deep
learning in these areas. Neural architecture search (NAS), the process of
automating the design of neural architectures for a given task, is an
inevitable next step in automating machine learning and has already outpaced
the best human-designed architectures on many tasks. In the past few years,
research in NAS has been progressing rapidly, with over 1000 papers released
since 2020 (Deng and Lindauer, 2021). In this survey, we provide an organized
and comprehensive guide to neural architecture search. We give a taxonomy of
search spaces, algorithms, and speedup techniques, and we discuss resources
such as benchmarks, best practices, other surveys, and open-source libraries
A Visual Modeling Method for Spatiotemporal and Multidimensional Features in Epidemiological Analysis: Applied COVID-19 Aggregated Datasets
The visual modeling method enables flexible interactions with rich graphical
depictions of data and supports the exploration of the complexities of
epidemiological analysis. However, most epidemiology visualizations do not
support the combined analysis of objective factors that might influence the
transmission situation, resulting in a lack of quantitative and qualitative
evidence. To address this issue, we have developed a portrait-based visual
modeling method called +msRNAer. This method considers the spatiotemporal
features of virus transmission patterns and the multidimensional features of
objective risk factors in communities, enabling portrait-based exploration and
comparison in epidemiological analysis. We applied +msRNAer to aggregate
COVID-19-related datasets in New South Wales, Australia, which combined
COVID-19 case number trends, geo-information, intervention events, and
expert-supervised risk factors extracted from LGA-based censuses. We perfected
the +msRNAer workflow with collaborative views and evaluated its feasibility,
effectiveness, and usefulness through one user study and three subject-driven
case studies. Positive feedback from experts indicates that +msRNAer provides a
general understanding of analyzing comprehension that not only compares
relationships between cases in time-varying and risk factors through portraits
but also supports navigation in fundamental geographical, timeline, and other
factor comparisons. By adopting interactions, experts discovered functional and
practical implications for potential patterns of long-standing community
factors against the vulnerability faced by the pandemic. Experts confirmed that
+msRNAer is expected to deliver visual modeling benefits with spatiotemporal
and multidimensional features in other epidemiological analysis scenarios
Bayesian Reconstruction of Magnetic Resonance Images using Gaussian Processes
A central goal of modern magnetic resonance imaging (MRI) is to reduce the
time required to produce high-quality images. Efforts have included hardware
and software innovations such as parallel imaging, compressed sensing, and deep
learning-based reconstruction. Here, we propose and demonstrate a Bayesian
method to build statistical libraries of magnetic resonance (MR) images in
k-space and use these libraries to identify optimal subsampling paths and
reconstruction processes. Specifically, we compute a multivariate normal
distribution based upon Gaussian processes using a publicly available library
of T1-weighted images of healthy brains. We combine this library with
physics-informed envelope functions to only retain meaningful correlations in
k-space. This covariance function is then used to select a series of
ring-shaped subsampling paths using Bayesian optimization such that they
optimally explore space while remaining practically realizable in commercial
MRI systems. Combining optimized subsampling paths found for a range of images,
we compute a generalized sampling path that, when used for novel images,
produces superlative structural similarity and error in comparison to
previously reported reconstruction processes (i.e. 96.3% structural similarity
and <0.003 normalized mean squared error from sampling only 12.5% of the
k-space data). Finally, we use this reconstruction process on pathological data
without retraining to show that reconstructed images are clinically useful for
stroke identification
Reinforcing optimization enabled interactive approach for liver tumor extraction in computed tomography images
Detecting liver abnormalities is a difficult task in radiation planning and treatment. The modern development integrates medical imaging into computer techniques. This advancement has monumental effect on how medical images are interpreted and analyzed. In many circumstances, manual segmentation of liver from computerized tomography (CT) imaging is imperative, and cannot provide satisfactory results. However, there are some difficulties in segmenting the liver due to its uneven shape, fuzzy boundary and complicated structure. This leads to necessity of enabling optimization in interactive segmentation approach. The main objective of reinforcing optimization is to search the optimal threshold and reduce the chance of falling into local optimum with survival of the fittest (SOF) technique. The proposed methodology makes use of pre-processing stage and reinforcing meta heuristics optimization based fuzzy c-means (FCM) for obtaining detailed information about the image. This information gives the optimal threshold value that is used for segmenting the region of interest with minimum user input. Suspicious areas are recognized from the segmented output. Both public and simulated dataset have been taken for experimental purposes. To validate the effectiveness of the proposed strategy, performance criteria such as dice coefficient, mode and user interaction level are taken and compared with state-of-the-art algorithms
Examples of works to practice staccato technique in clarinet instrument
Klarnetin staccato tekniğini güçlendirme aşamaları eser çalışmalarıyla uygulanmıştır. Staccato
geçişlerini hızlandıracak ritim ve nüans çalışmalarına yer verilmiştir. Çalışmanın en önemli amacı
sadece staccato çalışması değil parmak-dilin eş zamanlı uyumunun hassasiyeti üzerinde de
durulmasıdır. Staccato çalışmalarını daha verimli hale getirmek için eser çalışmasının içinde etüt
çalışmasına da yer verilmiştir. Çalışmaların üzerinde titizlikle durulması staccato çalışmasının ilham
verici etkisi ile müzikal kimliğe yeni bir boyut kazandırmıştır. Sekiz özgün eser çalışmasının her
aşaması anlatılmıştır. Her aşamanın bir sonraki performans ve tekniği güçlendirmesi esas alınmıştır.
Bu çalışmada staccato tekniğinin hangi alanlarda kullanıldığı, nasıl sonuçlar elde edildiği bilgisine
yer verilmiştir. Notaların parmak ve dil uyumu ile nasıl şekilleneceği ve nasıl bir çalışma disiplini
içinde gerçekleşeceği planlanmıştır. Kamış-nota-diyafram-parmak-dil-nüans ve disiplin
kavramlarının staccato tekniğinde ayrılmaz bir bütün olduğu saptanmıştır. Araştırmada literatür
taraması yapılarak staccato ile ilgili çalışmalar taranmıştır. Tarama sonucunda klarnet tekniğin de
kullanılan staccato eser çalışmasının az olduğu tespit edilmiştir. Metot taramasında da etüt
çalışmasının daha çok olduğu saptanmıştır. Böylelikle klarnetin staccato tekniğini hızlandırma ve
güçlendirme çalışmaları sunulmuştur. Staccato etüt çalışmaları yapılırken, araya eser çalışmasının
girmesi beyni rahatlattığı ve istekliliği daha arttırdığı gözlemlenmiştir. Staccato çalışmasını yaparken
doğru bir kamış seçimi üzerinde de durulmuştur. Staccato tekniğini doğru çalışmak için doğru bir
kamışın dil hızını arttırdığı saptanmıştır. Doğru bir kamış seçimi kamıştan rahat ses çıkmasına
bağlıdır. Kamış, dil atma gücünü vermiyorsa daha doğru bir kamış seçiminin yapılması gerekliliği
vurgulanmıştır. Staccato çalışmalarında baştan sona bir eseri yorumlamak zor olabilir. Bu açıdan
çalışma, verilen müzikal nüanslara uymanın, dil atış performansını rahatlattığını ortaya koymuştur.
Gelecek nesillere edinilen bilgi ve birikimlerin aktarılması ve geliştirici olması teşvik edilmiştir.
Çıkacak eserlerin nasıl çözüleceği, staccato tekniğinin nasıl üstesinden gelinebileceği anlatılmıştır.
Staccato tekniğinin daha kısa sürede çözüme kavuşturulması amaç edinilmiştir. Parmakların
yerlerini öğrettiğimiz kadar belleğimize de çalışmaların kaydedilmesi önemlidir. Gösterilen azmin ve
sabrın sonucu olarak ortaya çıkan yapıt başarıyı daha da yukarı seviyelere çıkaracaktır
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