Functional Dependencies Unleashed for Scalable Data Exchange

We address the problem of efficiently evaluating target functional dependencies (fds) in the Data Exchange (DE) process. Target fds naturally occur in many DE scenarios, including the ones in Life Sciences in which multiple source relations need to be structured under a constrained target schema. However, despite their wide use, target fds' evaluation is still a bottleneck in the state-of-the-art DE engines. Systems relying on an all-SQL approach typically do not support target fds unless additional information is provided. Alternatively, DE engines that do include these dependencies typically pay the price of a significant drop in performance and scalability. In this paper, we present a novel chase-based algorithm that can efficiently handle arbitrary fds on the target. Our approach essentially relies on exploiting the interactions between source-to-target (s-t) tuple-generating dependencies (tgds) and target fds. This allows us to tame the size of the intermediate chase results, by playing on a careful ordering of chase steps interleaving fds and (chosen) tgds. As a direct consequence, we importantly diminish the fd application scope, often a central cause of the dramatic overhead induced by target fds. Moreover, reasoning on dependency interaction further leads us to interesting parallelization opportunities, yielding additional scalability gains. We provide a proof-of-concept implementation of our chase-based algorithm and an experimental study aiming at gauging its scalability with respect to a number of parameters, among which the size of source instances and the number of dependencies of each tested scenario. Finally, we empirically compare with the latest DE engines, and show that our algorithm outperforms them

A Comparison of Big Data Frameworks on a Layered Dataflow Model

In the world of Big Data analytics, there is a series of tools aiming at simplifying programming applications to be executed on clusters. Although each tool claims to provide better programming, data and execution models, for which only informal (and often confusing) semantics is generally provided, all share a common underlying model, namely, the Dataflow model. The Dataflow model we propose shows how various tools share the same expressiveness at different levels of abstraction. The contribution of this work is twofold: first, we show that the proposed model is (at least) as general as existing batch and streaming frameworks (e.g., Spark, Flink, Storm), thus making it easier to understand high-level data-processing applications written in such frameworks. Second, we provide a layered model that can represent tools and applications following the Dataflow paradigm and we show how the analyzed tools fit in each level.Comment: 19 pages, 6 figures, 2 tables, In Proc. of the 9th Intl Symposium on High-Level Parallel Programming and Applications (HLPP), July 4-5 2016, Muenster, German

Integrating testing techniques through process programming

Integration of multiple testing techniques is required to demonstrate high quality of software. Technique integration has three basic goals: incremental testing capabilities, extensive error detection, and cost-effective application. We are experimenting with the use of process programming as a mechanism of integrating testing techniques. Having set out to integrate DATA FLOW testing and RELAY, we proposed synergistic use of these techniques to achieve all three goals. We developed a testing process program much as we would develop a software product from requirements through design to implementation and evaluation. We found process programming to be effective for explicitly integrating the techniques and achieving the desired synergism. Used in this way, process programming also mitigates many of the other problems that plague testing in the software development process

GraphLab: A New Framework for Parallel Machine Learning

Designing and implementing efficient, provably correct parallel machine learning (ML) algorithms is challenging. Existing high-level parallel abstractions like MapReduce are insufficiently expressive while low-level tools like MPI and Pthreads leave ML experts repeatedly solving the same design challenges. By targeting common patterns in ML, we developed GraphLab, which improves upon abstractions like MapReduce by compactly expressing asynchronous iterative algorithms with sparse computational dependencies while ensuring data consistency and achieving a high degree of parallel performance. We demonstrate the expressiveness of the GraphLab framework by designing and implementing parallel versions of belief propagation, Gibbs sampling, Co-EM, Lasso and Compressed Sensing. We show that using GraphLab we can achieve excellent parallel performance on large scale real-world problems

Query Rewriting and Optimization for Ontological Databases

Ontological queries are evaluated against a knowledge base consisting of an extensional database and an ontology (i.e., a set of logical assertions and constraints which derive new intensional knowledge from the extensional database), rather than directly on the extensional database. The evaluation and optimization of such queries is an intriguing new problem for database research. In this paper, we discuss two important aspects of this problem: query rewriting and query optimization. Query rewriting consists of the compilation of an ontological query into an equivalent first-order query against the underlying extensional database. We present a novel query rewriting algorithm for rather general types of ontological constraints which is well-suited for practical implementations. In particular, we show how a conjunctive query against a knowledge base, expressed using linear and sticky existential rules, that is, members of the recently introduced Datalog+/- family of ontology languages, can be compiled into a union of conjunctive queries (UCQ) against the underlying database. Ontological query optimization, in this context, attempts to improve this rewriting process so to produce possibly small and cost-effective UCQ rewritings for an input query.Comment: arXiv admin note: text overlap with arXiv:1312.5914 by other author

Modeling and Reasoning over Distributed Systems using Aspect-Oriented Graph Grammars

Aspect-orientation is a relatively new paradigm that introduces abstractions to modularize the implementation of system-wide policies. It is based on a composition operation, called aspect weaving, that implicitly modifies a base system by performing related changes within the system modules. Aspect-oriented graph grammars (AOGG) extend the classic graph grammar formalism by defining aspects as sets of rule-based modifications over a base graph grammar. Despite the advantages of aspect-oriented concepts regarding modularity, the implicit nature of the aspect weaving operation may also introduce issues when reasoning about the system behavior. Since in AOGGs aspect weaving is characterized by means of rule-based rewriting, we can overcome these problems by using known analysis techniques from the graph transformation literature to study aspect composition. In this paper, we present a case study of a distributed client-server system with global policies, modeled as an aspect-oriented graph grammar, and discuss how to use the AGG tool to identify potential conflicts in aspect weaving