Daftar Isi

Daftar Is

Dewan Redaksi

Dewan Redaks

Early Permian Pangea 'B' to Late Permian Pangea 'A"

The pre-drift Wegenerian model of Pangea is almost universally accepted, but debate exists on its pre-Jurassic configuration since Ted Irving introduced Pangea 'B' by placing Gondwana farther to the east by ∼3000 km with respect to Laurasia on the basis of paleomagnetic data. New paleomagnetic data from radiometrically dated Early Permian volcanic rocks from parts of Adria that are tectonically coherent with Africa (Gondwana), integrated with published coeval data from Gondwana and Laurasia, again only from igneous rocks, fully support a Pangea 'B' configuration in the Early Permian. The use of paleomagnetic data strictly from igneous rocks excludes artifacts from sedimentary inclination error as a contributing explanation for Pangea 'B'. The ultimate option to reject Pangea 'B' is to abandon the geocentric axial dipole hypothesis by introducing a significant non-dipole (zonal octupole) component in the Late Paleozoic time-averaged geomagnetic field. We demonstrate, however, by using a dataset consisting entirely of paleomagnetic directions with low inclinations from sampling sites confined to one hemisphere from Gondwana as well as Laurasia that the effects of a zonal octupole field contribution would not explain away the paleomagnetic evidence for Pangea 'B' in the Early Permian. We therefore regard the paleomagnetic evidence for an Early Permian Pangea 'B' as robust. The transformation from Pangea 'B' to Pangea 'A' took place during the Permian because Late Permian paleomagnetic data allow a Pangea 'A' configuration. We therefore review geological evidence from the literature in support of an intra-Pangea dextral megashear system. The transformation occurred after the cooling of the Variscan mega-suture and lasted ∼20 Myr. In this interval, the Neotethys Ocean opened between India/Arabia and the Cimmerian microcontinents in the east, while widespread lithospheric wrenching and magmatism took place in the west around the Adriatic promontory. The general distribution of plate boundaries and resulting driving forces are qualitatively consistent with a right-lateral shear couple between Gondwana and Laurasia during the Permian. Transcurrent plate boundaries associated with the Pangea transformation reactivated Variscan shear zones and were subsequently exploited by the opening of western Neotethyan seaways in the Jurassic

The History of Expansion of the Genus Bursaphelenchus (Nematoda: Aphelenchida: Parasitaphelenchidae)

Because of globalization and removal of geographical barriers, frequent biological invasions of introduced species become an urgent environmental problem. According to the Convention on Biological Diversity (CBD), precise identification of dangerous aggressive species at the early stages of their invasion to new regions is the most important component of the environmental control and monitoring. To resist the potential environmental hazard, the precise data are required on the current distribution and history of expansion of pests that are of global economic importance

Mercury anomalies associated with three extinction events (Capitanian Crisis, Latest Permian Extinction and the Smithian/Spathian Extinction) in NW Pangea

Copyright © Cambridge University Press 2015. Strata of Permian - Early Triassic age that include a record of three major extinction events (Capitanian Crisis, Latest Permian Extinction and the Smithian/Spathian Extinction) were examined at the Festningen section, Spitsbergen. Over the c. 12 Ma record examined, mercury in the sediments shows relatively constant background values of 0.005-0.010 μg g -1 . However, there are notable spikes in Hg concentration over an order of magnitude above background associated with the three extinctions. The Hg/total organic carbon (TOC) ratio shows similar large spikes, indicating that they represent a true increase in Hg loading to the environment. We argue that these represent Hg loading events associated with enhanced Hg emissions from large igneous province (LIP) events that are synchronous with the extinctions. The Hg anomalies are consistent across the NW margin of Pangea, indicating that widespread mercury loading occurred. While this provides utility as a chemostratigraphic marker the Hg spikes may also indicate loading of toxic metals to the environment, a contributing cause to the mass extinction events

PanGEA: Identification of allele specific gene expression using the 454 technology

<p>Abstract</p> <p>Background</p> <p>Next generation sequencing technologies hold great potential for many biological questions. While mainly used for genomic sequencing, they are also very promising for gene expression profiling. Sequencing of cDNA does not only provide an estimate of the absolute expression level, it can also be used for the identification of allele specific gene expression.</p> <p>Results</p> <p>We developed PanGEA, a tool which enables a fast and user-friendly analysis of allele specific gene expression using the 454 technology. PanGEA allows mapping of 454-ESTs to genes or whole genomes, displaying gene expression profiles, identification of SNPs and the quantification of allele specific gene expression. The intuitive GUI of PanGEA facilitates a flexible and interactive analysis of the data. PanGEA additionally implements a modification of the Smith-Waterman algorithm which deals with incorrect estimates of homopolymer length as occuring in the 454 technology</p> <p>Conclusion</p> <p>To our knowledge, PanGEA is the first tool which facilitates the identification of allele specific gene expression. PanGEA is distributed under the Mozilla Public License and available at: <url>http://www.kofler.or.at/bioinformatics/PanGEA</url></p

Mobility of Pangea: Implications for Late Paleozoic and Early Mesozoic paleoclimate

Several recent analyses of paleomagnetic data support the concept of Pangea, an assemblage of most of the world‘s continents that was mobile in terms of large-scale internal deformation and with respect to paleolatitude. The main feature of internal deformation involved the transformation from a Pangea B—type configuration in the late Paleozoic, with northwestern South America adjacent to eastern North America, to a more traditional Pangea A—type configuration in the early Mesozoic, with northwestern Africa adjacent to eastern North America. Pangea B thus seems to coincide in time with extensive low-latitude coal deposition and high southern-latitude Gondwana glaciations, whereas Pangea A coincides with generally drier conditions over the continents and no polar ice sheets. Although the configuration of Pangea may have been more stable as an A-type configuration in the Early and Middle Jurassic prior to breakup, the paleomagnetic evidence suggests that there was appreciable latitudinal change of the assembly. Such changing tectonic boundary conditions emphasize the practical importance of age registry of paleoclimate data in making valid comparisons with model results. A simple zonal climate model coupled with the geocentric axial dipole hypothesis for establishing paleolatitudes in precisely controlled paleogeographic reconstructions can explain many of the climate patterns in both the late Paleozoic and the early Mesozoic, but it cannot explain the presence or absence of continental ice sheets

Effect of a 14-day bed rest with recovery on muscle characteristics, of young and older adults

Skeletal muscle is very adaptable and has a fast response to various developmental effects (growth, exercise, lifestyle, injury, illness, etc.). Influences from the environment (altitude, temperature, gravity, etc.) also affect skeletal muscle characteristics. In addition, skeletal muscle loses the flexibility and weight as well as its function with age, as long as it is not used enough. If the muscle is not exposed to regular or high physical stress (such as: inactive life or sedentary lifestyle, hospitalization – bed rest, immobilization, flight to space, etc.) can occur loss of muscle tone and volume - muscle atrophy. This area is now rapidly gaining in importance, because of the aging of the population, sedentary lifestyle and ultimately travelling to space (microgravity). To confront and understand the adjustments in this kind of environment we have to simulate these environments with horizontal bed rest. Many older individuals decline functionally during hospitalization, and the deleterious consequences of bed rest may be one cause. This study reports on the effect of 14-days of bed rest on muscle parameters in healthy young and older adults. Healthy young (N=7) and older adults (N=12) remained on bed rest for 14 days continuously followed by recovery. Measures of muscle caracteristics were measured before and after bed rest and also after recovery. In healthy older adults, 14 days of bed rest results in loss of muscle fibre and whole muscle characteristics. Identification of interventions to maintain muscle function during hospitalization or periods of bed rest in older adults should be a high priority

Temporal relations between mineral deposits and global tectonic cycles

Natural Environment Research Council (grant NE/J021822/1) supported this research.Mineral deposits are heterogeneously distributed in both space and time, with variations reflecting tectonic setting, evolving environmental conditions, as in the atmosphere and hydrosphere, and secular changes in the Earth’s thermal history. The distribution of deposit types whose settings are tied to plate margin processes (e.g. orogenic gold, volcanic-hosted massive sulphide, Mississippi valley type Pb–Zn deposits) correlates well with the supercontinent cycle, whereas deposits related to intra-cratonic settings and mantle-driven igneous events, such as Ni–Cu–PGE deposits, lack a clear association. The episodic distribution of deposits tied to the supercontinent cycle is accentuated by selective preservation and biasing of rock units and events during supercontinent assembly, a process that encases the deposit within the assembled supercontinent and isolates it from subsequent removal and recycling at plate margins.Publisher PD

A Global Plate Model Including Lithospheric Deformation Along Major Rifts and Orogens Since the Triassic

Global deep‐time plate motion models have traditionally followed a classical rigid plate approach, even though plate deformation is known to be significant. Here we present a global Mesozoic–Cenozoic deforming plate motion model that captures the progressive extension of all continental margins since the initiation of rifting within Pangea at ~240 Ma. The model also includes major failed continental rifts and compressional deformation along collision zones. The outlines and timing of regional deformation episodes are reconstructed from a wealth of published regional tectonic models and associated geological and geophysical data. We reconstruct absolute plate motions in a mantle reference frame with a joint global inversion using hot spot tracks for the last 80 million years and minimizing global trench migration velocities and net lithospheric rotation. In our optimized model, net rotation is consistently below 0.2°/Myr, and trench migration scatter is substantially reduced. Distributed plate deformation reaches a Mesozoic peak of 30 × 106 km2 in the Late Jurassic (~160–155 Ma), driven by a vast network of rift systems. After a mid‐Cretaceous drop in deformation, it reaches a high of 48 x 106 km2 in the Late Eocene (~35 Ma), driven by the progressive growth of plate collisions and the formation of new rift systems. About a third of the continental crustal area has been deformed since 240 Ma, partitioned roughly into 65% extension and 35% compression. This community plate model provides a framework for building detailed regional deforming plate networks and form a constraint for models of basin evolution and the plate‐mantle system