Optical flow estimation using steered-L1 norm

Motion is a very important part of understanding the visual picture of the surrounding environment. In image processing it involves the estimation of displacements for image points in an image sequence. In this context dense optical flow estimation is concerned with the computation of pixel displacements in a sequence of images, therefore it has been used widely in the field of image processing and computer vision. A lot of research was dedicated to enable an accurate and fast motion computation in image sequences. Despite the recent advances in the computation of optical flow, there is still room for improvements and optical flow algorithms still suffer from several issues, such as motion discontinuities, occlusion handling, and robustness to illumination changes. This thesis includes an investigation for the topic of optical flow and its applications. It addresses several issues in the computation of dense optical flow and proposes solutions. Specifically, this thesis is divided into two main parts dedicated to address two main areas of interest in optical flow. In the first part, image registration using optical flow is investigated. Both local and global image registration has been used for image registration. An image registration based on an improved version of the combined Local-global method of optical flow computation is proposed. A bi-lateral filter was used in this optical flow method to improve the edge preserving performance. It is shown that image registration via this method gives more robust results compared to the local and the global optical flow methods previously investigated. The second part of this thesis encompasses the main contribution of this research which is an improved total variation L1 norm. A smoothness term is used in the optical flow energy function to regularise this function. The L1 is a plausible choice for such a term because of its performance in preserving edges, however this term is known to be isotropic and hence decreases the penalisation near motion boundaries in all directions. The proposed improved L1 (termed here as the steered-L1 norm) smoothness term demonstrates similar performance across motion boundaries but improves the penalisation performance along such boundaries

Segmentation based variational model for accurate optical flow estimation.

Chen, Jianing.Thesis (M.Phil.)--Chinese University of Hong Kong, 2009.Includes bibliographical references (leaves 47-54).Abstract also in Chinese.Chapter 1 --- Introduction --- p.1Chapter 1.1 --- Background --- p.1Chapter 1.2 --- Related Work --- p.3Chapter 1.3 --- Thesis Organization --- p.5Chapter 2 --- Review on Optical Flow Estimation --- p.6Chapter 2.1 --- Variational Model --- p.6Chapter 2.1.1 --- Basic Assumptions and Constraints --- p.6Chapter 2.1.2 --- More General Energy Functional --- p.9Chapter 2.2 --- Discontinuity Preserving Techniques --- p.9Chapter 2.2.1 --- Data Term Robustification --- p.10Chapter 2.2.2 --- Diffusion Based Regularization --- p.11Chapter 2.2.3 --- Segmentation --- p.15Chapter 2.3 --- Chapter Summary --- p.15Chapter 3 --- Segmentation Based Optical Flow Estimation --- p.17Chapter 3.1 --- Initial Flow --- p.17Chapter 3.2 --- Color-Motion Segmentation --- p.19Chapter 3.3 --- Parametric Flow Estimating Incorporating Segmentation --- p.21Chapter 3.4 --- Confidence Map Construction --- p.24Chapter 3.4.1 --- Occlusion detection --- p.24Chapter 3.4.2 --- Pixel-wise motion coherence --- p.24Chapter 3.4.3 --- Segment-wise model confidence --- p.26Chapter 3.5 --- Final Combined Variational Model --- p.28Chapter 3.6 --- Chapter Summary --- p.28Chapter 4 --- Experiment Results --- p.30Chapter 4.1 --- Quantitative Evaluation --- p.30Chapter 4.2 --- Warping Results --- p.34Chapter 4.3 --- Chapter Summary --- p.35Chapter 5 --- Application - Single Image Animation --- p.37Chapter 5.1 --- Introduction --- p.37Chapter 5.2 --- Approach --- p.38Chapter 5.2.1 --- Pre-Process Stage --- p.39Chapter 5.2.2 --- Coordinate Transform --- p.39Chapter 5.2.3 --- Motion Field Transfer --- p.41Chapter 5.2.4 --- Motion Editing and Apply --- p.41Chapter 5.2.5 --- Gradient-domain composition --- p.42Chapter 5.3 --- Experiments --- p.43Chapter 5.3.1 --- Active Motion Transfer --- p.43Chapter 5.3.2 --- Animate Stationary Temporal Dynamics --- p.44Chapter 5.4 --- Chapter Summary --- p.45Chapter 6 --- Conclusion --- p.46Bibliography --- p.4

Variational image fusion

The main goal of this work is the fusion of multiple images to a single composite that offers more information than the individual input images. We approach those fusion tasks within a variational framework. First, we present iterative schemes that are well-suited for such variational problems and related tasks. They lead to efficient algorithms that are simple to implement and well-parallelisable. Next, we design a general fusion technique that aims for an image with optimal local contrast. This is the key for a versatile method that performs well in many application areas such as multispectral imaging, decolourisation, and exposure fusion. To handle motion within an exposure set, we present the following two-step approach: First, we introduce the complete rank transform to design an optic flow approach that is robust against severe illumination changes. Second, we eliminate remaining misalignments by means of brightness transfer functions that relate the brightness values between frames. Additional knowledge about the exposure set enables us to propose the first fully coupled method that jointly computes an aligned high dynamic range image and dense displacement fields. Finally, we present a technique that infers depth information from differently focused images. In this context, we additionally introduce a novel second order regulariser that adapts to the image structure in an anisotropic way.Das Hauptziel dieser Arbeit ist die Fusion mehrerer Bilder zu einem Einzelbild, das mehr Informationen bietet als die einzelnen Eingangsbilder. Wir verwirklichen diese Fusionsaufgaben in einem variationellen Rahmen. Zunächst präsentieren wir iterative Schemata, die sich gut für solche variationellen Probleme und verwandte Aufgaben eignen. Danach entwerfen wir eine Fusionstechnik, die ein Bild mit optimalem lokalen Kontrast anstrebt. Dies ist der Schlüssel für eine vielseitige Methode, die gute Ergebnisse für zahlreiche Anwendungsbereiche wie Multispektralaufnahmen, Bildentfärbung oder Belichtungsreihenfusion liefert. Um Bewegungen in einer Belichtungsreihe zu handhaben, präsentieren wir folgenden Zweischrittansatz: Zuerst stellen wir die komplette Rangtransformation vor, um eine optische Flussmethode zu entwerfen, die robust gegenüber starken Beleuchtungsänderungen ist. Dann eliminieren wir verbleibende Registrierungsfehler mit der Helligkeitstransferfunktion, welche die Helligkeitswerte zwischen Bildern in Beziehung setzt. Zusätzliches Wissen über die Belichtungsreihe ermöglicht uns, die erste vollständig gekoppelte Methode vorzustellen, die gemeinsam ein registriertes Hochkontrastbild sowie dichte Bewegungsfelder berechnet. Final präsentieren wir eine Technik, die von unterschiedlich fokussierten Bildern Tiefeninformation ableitet. In diesem Kontext stellen wir zusätzlich einen neuen Regularisierer zweiter Ordnung vor, der sich der Bildstruktur anisotrop anpasst

Variational image fusion

The main goal of this work is the fusion of multiple images to a single composite that offers more information than the individual input images. We approach those fusion tasks within a variational framework. First, we present iterative schemes that are well-suited for such variational problems and related tasks. They lead to efficient algorithms that are simple to implement and well-parallelisable. Next, we design a general fusion technique that aims for an image with optimal local contrast. This is the key for a versatile method that performs well in many application areas such as multispectral imaging, decolourisation, and exposure fusion. To handle motion within an exposure set, we present the following two-step approach: First, we introduce the complete rank transform to design an optic flow approach that is robust against severe illumination changes. Second, we eliminate remaining misalignments by means of brightness transfer functions that relate the brightness values between frames. Additional knowledge about the exposure set enables us to propose the first fully coupled method that jointly computes an aligned high dynamic range image and dense displacement fields. Finally, we present a technique that infers depth information from differently focused images. In this context, we additionally introduce a novel second order regulariser that adapts to the image structure in an anisotropic way.Das Hauptziel dieser Arbeit ist die Fusion mehrerer Bilder zu einem Einzelbild, das mehr Informationen bietet als die einzelnen Eingangsbilder. Wir verwirklichen diese Fusionsaufgaben in einem variationellen Rahmen. Zunächst präsentieren wir iterative Schemata, die sich gut für solche variationellen Probleme und verwandte Aufgaben eignen. Danach entwerfen wir eine Fusionstechnik, die ein Bild mit optimalem lokalen Kontrast anstrebt. Dies ist der Schlüssel für eine vielseitige Methode, die gute Ergebnisse für zahlreiche Anwendungsbereiche wie Multispektralaufnahmen, Bildentfärbung oder Belichtungsreihenfusion liefert. Um Bewegungen in einer Belichtungsreihe zu handhaben, präsentieren wir folgenden Zweischrittansatz: Zuerst stellen wir die komplette Rangtransformation vor, um eine optische Flussmethode zu entwerfen, die robust gegenüber starken Beleuchtungsänderungen ist. Dann eliminieren wir verbleibende Registrierungsfehler mit der Helligkeitstransferfunktion, welche die Helligkeitswerte zwischen Bildern in Beziehung setzt. Zusätzliches Wissen über die Belichtungsreihe ermöglicht uns, die erste vollständig gekoppelte Methode vorzustellen, die gemeinsam ein registriertes Hochkontrastbild sowie dichte Bewegungsfelder berechnet. Final präsentieren wir eine Technik, die von unterschiedlich fokussierten Bildern Tiefeninformation ableitet. In diesem Kontext stellen wir zusätzlich einen neuen Regularisierer zweiter Ordnung vor, der sich der Bildstruktur anisotrop anpasst

Generalizable automated pixel-level structural segmentation of medical and biological data

Over the years, the rapid expansion in imaging techniques and equipments has driven the demand for more automation in handling large medical and biological data sets. A wealth of approaches have been suggested as optimal solutions for their respective imaging types. These solutions span various image resolutions, modalities and contrast (staining) mechanisms. Few approaches generalise well across multiple image types, contrasts or resolution. This thesis proposes an automated pixel-level framework that addresses 2D, 2D+t and 3D structural segmentation in a more generalizable manner, yet has enough adaptability to address a number of specific image modalities, spanning retinal funduscopy, sequential fluorescein angiography and two-photon microscopy. The pixel-level segmentation scheme involves: i ) constructing a phase-invariant orientation field of the local spatial neighbourhood; ii ) combining local feature maps with intensity-based measures in a structural patch context; iii ) using a complex supervised learning process to interpret the combination of all the elements in the patch in order to reach a classification decision. This has the advantage of transferability from retinal blood vessels in 2D to neural structures in 3D. To process the temporal components in non-standard 2D+t retinal angiography sequences, we first introduce a co-registration procedure: at the pairwise level, we combine projective RANSAC with a quadratic homography transformation to map the coordinate systems between any two frames. At the joint level, we construct a hierarchical approach in order for each individual frame to be registered to the global reference intra- and inter- sequence(s). We then take a non-training approach that searches in both the spatial neighbourhood of each pixel and the filter output across varying scales to locate and link microvascular centrelines to (sub-) pixel accuracy. In essence, this \link while extract" piece-wise segmentation approach combines the local phase-invariant orientation field information with additional local phase estimates to obtain a soft classification of the centreline (sub-) pixel locations. Unlike retinal segmentation problems where vasculature is the main focus, 3D neural segmentation requires additional exibility, allowing a variety of structures of anatomical importance yet with different geometric properties to be differentiated both from the background and against other structures. Notably, cellular structures, such as Purkinje cells, neural dendrites and interneurons, all display certain elongation along their medial axes, yet each class has a characteristic shape captured by an orientation field that distinguishes it from other structures. To take this into consideration, we introduce a 5D orientation mapping to capture these orientation properties. This mapping is incorporated into the local feature map description prior to a learning machine. Extensive performance evaluations and validation of each of the techniques presented in this thesis is carried out. For retinal fundus images, we compute Receiver Operating Characteristic (ROC) curves on existing public databases (DRIVE & STARE) to assess and compare our algorithms with other benchmark methods. For 2D+t retinal angiography sequences, we compute the error metrics ("Centreline Error") of our scheme with other benchmark methods. For microscopic cortical data stacks, we present segmentation results on both surrogate data with known ground-truth and experimental rat cerebellar cortex two-photon microscopic tissue stacks.Open Acces