Contributions to the segmentation of dermoscopic images

Tese de mestrado. Mestrado em Engenharia Biomédica. Faculdade de Engenharia. Universidade do Porto. 201

Automatic Detection of Critical Dermoscopy Features for Malignant Melanoma Diagnosis

Improved methods for computer-aided analysis of identifying features of skin lesions from digital images of the lesions are provided. Improved preprocessing of the image that 1) eliminates artifacts that occlude or distort skin lesion features and 2) identifies groups of pixels within the skin lesion that represent features and/or facilitate the quantification of features are provided including improved digital hair removal algorithms. Improved methods for analyzing lesion features are also provided

Segmentation and Classification of Skin Lesions for Disease Diagnosis

In this paper, a novel approach for automatic segmentation and classification of skin lesions is proposed. Initially, skin images are filtered to remove unwanted hairs and noise and then the segmentation process is carried out to extract lesion areas. For segmentation, a region growing method is applied by automatic initialization of seed points. The segmentation performance is measured with different well known measures and the results are appreciable. Subsequently, the extracted lesion areas are represented by color and texture features. SVM and k-NN classifiers are used along with their fusion for the classification using the extracted features. The performance of the system is tested on our own dataset of 726 samples from 141 images consisting of 5 different classes of diseases. The results are very promising with 46.71% and 34% of F-measure using SVM and k-NN classifier respectively and with 61% of F-measure for fusion of SVM and k-NN.Comment: 10 pages, 6 figures, 2 Tables in Elsevier, Proceedia Computer Science, International Conference on Advanced Computing Technologies and Applications (ICACTA-2015

Computer-Aided Detection of Skin Cancer Detection from Lesion Images via Deep-Learning Techniques

More and more genetic and metabolic abnormalities are now known to cause cancer, which is typically fatal. Any particular body part may become infected by cancerous cells, which can be fatal. One of the most prevalent types of cancer is skin cancer, which is spreading worldwide.The primary subtypes of skin cancer are squamous and basal cell carcinomas, as well as melanoma, which is clinically aggressive and accounts for the majority of fatalities. Screening for skin cancer is so crucial.Deep Learning is one of the best options to quickly and precisely diagnose skin cancer (DL).This study used the Convolution Neural Network (CNN) deep learning technique to distinguish between the two primary types of cancers, malignant and benign, using the ISIC2018 dataset. The 3533 skin lesions in this dataset range from benign to malignant, and nonmelanocytic to melanocytic malignancies. The images were initially enhanced and edited using ESRGAN. The preprocessing stage involved resizing, normalising, and augmenting the images. By combining the results of numerous repetitions, the CNN approach might be used to categorise images of skin lesions. Several transfer learning models, such as Resnet50, InceptionV3, and Inception Resnet, were then used for fine-tuning. The uniqueness and contribution of this study are the preprocessing stages using ESRGAN and the testing of various models (including the intended CNN, Resnet50, InceptionV3, and Inception Resnet). Results from the model we developed matched those from the pretrained model exactly. The efficiency of the suggested strategy was proved by simulations using the ISIC 2018 skin lesion dataset. In terms of accuracy, the CNN model performed better than the Resnet50 (83.7%), InceptionV3 (85.8%), and Inception Resnet (84%) models

Segmentation of Melanoma Skin Lesion Using Perceptual Color Difference Saliency with Morphological Analysis

The prevalence of melanoma skin cancer disease is rapidly increasing as recorded death cases of its patients continue to annually escalate. Reliable segmentation of skin lesion is one essential requirement of an efficient noninvasive computer aided diagnosis tool for accelerating the identification process of melanoma. This paper presents a new algorithm based on perceptual color difference saliency along with binary morphological analysis for segmentation of melanoma skin lesion in dermoscopic images. The new algorithm is compared with existing image segmentation algorithms on benchmark dermoscopic images acquired from public corpora. Results of both qualitative and quantitative evaluations of the new algorithm are encouraging as the algorithm performs excellently in comparison with the existing image segmentation algorithms

A survey, review, and future trends of skin lesion segmentation and classification

The Computer-aided Diagnosis or Detection (CAD) approach for skin lesion analysis is an emerging field of research that has the potential to alleviate the burden and cost of skin cancer screening. Researchers have recently indicated increasing interest in developing such CAD systems, with the intention of providing a user-friendly tool to dermatologists to reduce the challenges encountered or associated with manual inspection. This article aims to provide a comprehensive literature survey and review of a total of 594 publications (356 for skin lesion segmentation and 238 for skin lesion classification) published between 2011 and 2022. These articles are analyzed and summarized in a number of different ways to contribute vital information regarding the methods for the development of CAD systems. These ways include: relevant and essential definitions and theories, input data (dataset utilization, preprocessing, augmentations, and fixing imbalance problems), method configuration (techniques, architectures, module frameworks, and losses), training tactics (hyperparameter settings), and evaluation criteria. We intend to investigate a variety of performance-enhancing approaches, including ensemble and post-processing. We also discuss these dimensions to reveal their current trends based on utilization frequencies. In addition, we highlight the primary difficulties associated with evaluating skin lesion segmentation and classification systems using minimal datasets, as well as the potential solutions to these difficulties. Findings, recommendations, and trends are disclosed to inform future research on developing an automated and robust CAD system for skin lesion analysis

Cancer diagnosis using deep learning: A bibliographic review

In this paper, we first describe the basics of the field of cancer diagnosis, which includes steps of cancer diagnosis followed by the typical classification methods used by doctors, providing a historical idea of cancer classification techniques to the readers. These methods include Asymmetry, Border, Color and Diameter (ABCD) method, seven-point detection method, Menzies method, and pattern analysis. They are used regularly by doctors for cancer diagnosis, although they are not considered very efficient for obtaining better performance. Moreover, considering all types of audience, the basic evaluation criteria are also discussed. The criteria include the receiver operating characteristic curve (ROC curve), Area under the ROC curve (AUC), F1 score, accuracy, specificity, sensitivity, precision, dice-coefficient, average accuracy, and Jaccard index. Previously used methods are considered inefficient, asking for better and smarter methods for cancer diagnosis. Artificial intelligence and cancer diagnosis are gaining attention as a way to define better diagnostic tools. In particular, deep neural networks can be successfully used for intelligent image analysis. The basic framework of how this machine learning works on medical imaging is provided in this study, i.e., pre-processing, image segmentation and post-processing. The second part of this manuscript describes the different deep learning techniques, such as convolutional neural networks (CNNs), generative adversarial models (GANs), deep autoencoders (DANs), restricted Boltzmann’s machine (RBM), stacked autoencoders (SAE), convolutional autoencoders (CAE), recurrent neural networks (RNNs), long short-term memory (LTSM), multi-scale convolutional neural network (M-CNN), multi-instance learning convolutional neural network (MIL-CNN). For each technique, we provide Python codes, to allow interested readers to experiment with the cited algorithms on their own diagnostic problems. The third part of this manuscript compiles the successfully applied deep learning models for different types of cancers. Considering the length of the manuscript, we restrict ourselves to the discussion of breast cancer, lung cancer, brain cancer, and skin cancer. The purpose of this bibliographic review is to provide researchers opting to work in implementing deep learning and artificial neural networks for cancer diagnosis a knowledge from scratch of the state-of-the-art achievements

Automated classification of malignant melanoma based on detection of atypical pigment network in dermoscopy images of skin lesions

“Melanoma causes more deaths than any other form of skin cancer. Early melanoma detection is important to prevent progression to a more deadly stage. Automated computer-based identification of melanoma from dermoscopic images of skin lesions is the most efficient method in early diagnosis. An automated melanoma identification system must include multiple steps, involving lesion segmentation, feature extraction, feature combination and classification. In this research, a classifier-based approach for automatically selecting a lesion border mask for segmentation of dermoscopic skin lesion images is presented. A logistic regression based model selects a single lesion border mask from multiple border masks generated by multiple lesion segmentation algorithms. This research also presents a method of segmenting atypical pigment network (APN) based on variance in the red plane in the lesion area of a dermoscopic image. Features extracted from APN regions are used in automated classification of melanoma. The automated identification of melanoma is further improved by fusion of other features relevant to melanoma detection. This research uses clinical features, APN features, median split cluster features, pink area features, white area features and salient point features in various hierarchical combinations to improve the overall performance in melanoma identification. A training set of 837 dermoscopic skin lesion images together with a disjoint test set of 804 dermoscopic skin lesion images are used in this research to produce the experimental findings”--Abstract, page iv