High-Performance Embedded Morphological Wavelet Coding

Morphological analysis can be applied in wavelet domain to analyze and represent the position of significant coefficients. New operators have to be introduced which are able to exploit both the multiresolution and the filter bank peculiarities of the subband representation of visual information. In this paper an efficient morphological wavelet coder is proposed. The clustering trend of significant coefficients is captured by a new kind of multi resolution binary dilation operator. The layered and adaptive nature of this subband dilation makes it possible for the coding technique to produce an embedded bit-stream with a modest computational cost and state-of-the-art Rate-Distortion performance. Morphological wavelet coding appears promising because the localized analysis of wavelet coefficient clusters is adequate to capture intrinsic patterns of the source which can have substantial benefits for perceptual or even object-based reconstruction quality concerns. Here we test the performance of our algorithm and compare the effects of different wavelet filters. We obtain state of the art coding performance and good perceptual results both for 2D and 3D images, with a new technique that seems to be well suited for further developments

Optimizing Lossy Compression Rate-Distortion from Automatic Online Selection between SZ and ZFP

With ever-increasing volumes of scientific data produced by HPC applications, significantly reducing data size is critical because of limited capacity of storage space and potential bottlenecks on I/O or networks in writing/reading or transferring data. SZ and ZFP are the two leading lossy compressors available to compress scientific data sets. However, their performance is not consistent across different data sets and across different fields of some data sets: for some fields SZ provides better compression performance, while other fields are better compressed with ZFP. This situation raises the need for an automatic online (during compression) selection between SZ and ZFP, with a minimal overhead. In this paper, the automatic selection optimizes the rate-distortion, an important statistical quality metric based on the signal-to-noise ratio. To optimize for rate-distortion, we investigate the principles of SZ and ZFP. We then propose an efficient online, low-overhead selection algorithm that predicts the compression quality accurately for two compressors in early processing stages and selects the best-fit compressor for each data field. We implement the selection algorithm into an open-source library, and we evaluate the effectiveness of our proposed solution against plain SZ and ZFP in a parallel environment with 1,024 cores. Evaluation results on three data sets representing about 100 fields show that our selection algorithm improves the compression ratio up to 70% with the same level of data distortion because of very accurate selection (around 99%) of the best-fit compressor, with little overhead (less than 7% in the experiments).Comment: 14 pages, 9 figures, first revisio

Cyclostationary error analysis and filter properties in a 3D wavelet coding framework

The reconstruction error due to quantization of wavelet subbands can be modeled as a cyclostationary process because of the linear periodically shift variant property of the inverse wavelet transform. For N-dimensional data, N-dimensional reconstruction error power cyclostationary patterns replicate on the data sample lattice. For audio and image coding applications this fact is of little practical interest since the decoded data is perceived in its wholeness, the error power oscillations on single data elements cannot be seen or heard and a global PSNR error measure is often used to represent the reconstruction quality. A different situation is the one of 3D data (static volumes or video sequences) coding, where decoded data are usually visualized by plane sections and the reconstruction error power is commonly measured by a PSNR[n] sequence, with n representing either a spatial slicing plane (for volumetric data) or the temporal reference frame (for video). In this case, the cyclostationary oscillations on single data elements lead to a global PSNR[n] oscillation and this effect may become a relevant concern. In this paper we study and describe the above phenomena and evaluate their relevance in concrete coding applications. Our analysis is entirely carried out in the original signal domain and can easily be extended to more than three dimensions. We associate the oscillation pattern with the wavelet filter properties in a polyphase framework and we show that a substantial reduction of the oscillation amplitudes can be achieved under a proper selection of the basis functions. Our quantitative model is initially made under high-resolution conditions and then qualitatively extended to all coding rates for the wide family of bit-plane quantization-based coding techniques. Finally, we experimentally validate the proposed models and we perform a subjective evaluation of the visual relevance of the PSNR[n] fluctuations in the cases of medical volumes and video coding

New rate adaptation method for JPEG2000-based SNR Scalable Video Coding with Integer Linear Programming models

Abstract—In the last few years scalable video coding emerged as a promising technology for efficient distribution of videos through heterogeneous networks. In a heterogeneous environment, the video content needs to be adapted in order to meet different end terminal capability requirements (user adaptation) or fluctuations of the available bandwidth (network adaptation). Consequently, the adaptation problem is a critical issue in scalable video coding design. In this paper we introduce a new adaptation method for a proposed JPEG2000-based SNR scalable codec, that formulates and solves the adaptation problem as an Integer Linear Programming problem

Image Restoration for Remote Sensing: Overview and Toolbox

Remote sensing provides valuable information about objects or areas from a distance in either active (e.g., RADAR and LiDAR) or passive (e.g., multispectral and hyperspectral) modes. The quality of data acquired by remotely sensed imaging sensors (both active and passive) is often degraded by a variety of noise types and artifacts. Image restoration, which is a vibrant field of research in the remote sensing community, is the task of recovering the true unknown image from the degraded observed image. Each imaging sensor induces unique noise types and artifacts into the observed image. This fact has led to the expansion of restoration techniques in different paths according to each sensor type. This review paper brings together the advances of image restoration techniques with particular focuses on synthetic aperture radar and hyperspectral images as the most active sub-fields of image restoration in the remote sensing community. We, therefore, provide a comprehensive, discipline-specific starting point for researchers at different levels (i.e., students, researchers, and senior researchers) willing to investigate the vibrant topic of data restoration by supplying sufficient detail and references. Additionally, this review paper accompanies a toolbox to provide a platform to encourage interested students and researchers in the field to further explore the restoration techniques and fast-forward the community. The toolboxes are provided in https://github.com/ImageRestorationToolbox.Comment: This paper is under review in GRS

3D multiresolution statistical approaches for accelerated medical image and volume segmentation

This thesis was submitted for the degree of Doctor of Philosophy and awarded by Brunel University.Medical volume segmentation got the attraction of many researchers; therefore, many techniques have been implemented in terms of medical imaging including segmentations and other imaging processes. This research focuses on an implementation of segmentation system which uses several techniques together or on their own to segment medical volumes, the system takes a stack of 2D slices or a full 3D volumes acquired from medical scanners as a data input. Two main approaches have been implemented in this research for segmenting medical volume which are multi-resolution analysis and statistical modeling. Multi-resolution analysis has been mainly employed in this research for extracting the features. Higher dimensions of discontinuity (line or curve singularity) have been extracted in medical images using a modified multi-resolution analysis transforms such as ridgelet and curvelet transforms. The second implemented approach in this thesis is the use of statistical modeling in medical image segmentation; Hidden Markov models have been enhanced here to segment medical slices automatically, accurately, reliably and with lossless results. But the problem with using Markov models here is the computational time which is too long. This has been addressed by using feature reduction techniques which has also been implemented in this thesis. Some feature reduction and dimensionality reduction techniques have been used to accelerate the slowest block in the proposed system. This includes Principle Components Analysis, Gaussian Pyramids and other methods. The feature reduction techniques have been employed efficiently with the 3D volume segmentation techniques such as 3D wavelet and 3D Hidden Markov models. The system has been tested and validated using several procedures starting at a comparison with the predefined results, crossing the specialists’ validations, and ending by validating the system using a survey filled by the end users explaining the techniques and the results. This concludes that Markovian models segmentation results has overcome all other techniques in most patients’ cases. Curvelet transform has been also proved promising segmentation results; the end users rate it better than Markovian models due to the long time required with Hidden Markov models

Compression of 4D medical image and spatial segmentation using deformable models

Ph.DDOCTOR OF PHILOSOPH