SOFYA: Semantic on-the-fly Relation Alignment

Recent years have seen the rise of Web data, in particular Linked Data, with, up to now, more than 1000 datasets in the Linked Open Data Cloud (LOD). These datasets are mostly of entity-centric nature and are highly heterogeneous in terms of domains, language, schema, etc. Hence, the vision of uniformly querying such resources in the LOD has a long way to go. While equivalent entity instances across datasets are often linked by sameAs links, relations from different datasets and schemas are usually not aligned. In this paper, we propose an on-line instance-based relation alignment approach. The alignment may be performed during query execution and requires partial information from the datasets. We align relations to a target dataset using association rule mining approaches. We sample for equivalent entity instances with two main sampling strategies. Preliminary experiments, show that we are able to align relations with high accuracy, even if accessing the entire datasets is impossible or impractical

The Semantic Web MIDI Tape: An Interface for Interlinking MIDI and Context Metadata

The Linked Data paradigm has been used to publish a large number of musical datasets and ontologies on the Semantic Web, such as MusicBrainz, AcousticBrainz, and the Music Ontology. Recently, the MIDI Linked Data Cloud has been added to these datasets, representing more than 300,000 pieces in MIDI format as Linked Data, opening up the possibility for linking fine-grained symbolic music representations to existing music metadata databases. Despite the dataset making MIDI resources available in Web data standard formats such as RDF and SPARQL, the important issue of finding meaningful links between these MIDI resources and relevant contextual metadata in other datasets remains. A fundamental barrier for the provision and generation of such links is the difficulty that users have at adding new MIDI performance data and metadata to the platform. In this paper, we propose the Semantic Web MIDI Tape, a set of tools and associated interface for interacting with the MIDI Linked Data Cloud by enabling users to record, enrich, and retrieve MIDI performance data and related metadata in native Web data standards. The goal of such interactions is to find meaningful links between published MIDI resources and their relevant contextual metadata. We evaluate the Semantic Web MIDI Tape in various use cases involving user-contributed content, MIDI similarity querying, and entity recognition methods, and discuss their potential for finding links between MIDI resources and metadata

A community based approach for managing ontology alignments

The Semantic Web is rapidly becoming a defacto distributed repository for semantically represented data, thus leveraging on the added on value of the network effect. Various ontology mapping techniques and tools have been devised to facilitate the bridging and integration of distributed data repositories. Nevertheless, ontology mapping can benefitfrom human supervision to increase accuracy of results. The spread of Web 2.0 approaches demonstrate the possibility of using collaborative techniques for reaching consensus. While a number of prototypes for collaborative ontology construction are being developed, collaborative ontology mapping is not yet well investigated. In this paper, we describe a prototype that combines off-the-shelf ontology mapping tools with social software techniques to enable users to collaborate on mapping ontologies

Will this work for Susan? Challenges for delivering usable and useful generic linked data browsers

While we witness an explosion of exploration tools for simple datasets on Web 2.0 designed for use by ordinary citizens, the goal of a usable interface for supporting navigation and sense-making over arbitrary linked data has remained elusive. The purpose of this paper is to analyse why - what makes exploring linked data so hard? Through a user-centered use case scenario, we work through requirements for sense making with data to extract functional requirements and to compare these against our tools to see what challenges emerge to deliver a useful, usable knowledge building experience with linked data. We present presentation layer and heterogeneous data integration challenges and offer practical considerations for moving forward to effective linked data sensemaking tools

Integrating public datasets using linked data: challenges and design principles

The world is moving from a state where there is paucity of data to one of surfeit. These data, and datasets, are normally in different datastores and of different formats. Connecting these datasets together will increase their value and help discover interesting relationships amongst them. This paper describes our experience of using Linked Data to inter-operate these different datasets, the challenges we faced, and the solutions we devised. The paper concludes with apposite design principles for using linked data to inter-operate disparate datasets

TFBSTools: an R/bioconductor package for transcription factor binding site analysis.

Summary: The ability to efficiently investigate transcription factor binding sites (TFBSs) genome-wide is central to computational studies of gene regulation. TFBSTools is an R/Bioconductor package for the analysis and manipulation of TFBSs and their associated transcription factor profile matrices. TFBStools provides a toolkit for handling TFBS profile matrices, scanning sequences and alignments including whole genomes, and querying the JASPAR database. The functionality of the package can be easily extended to include advanced statistical analysis, data visualization and data integration. Availability and implementation: The package is implemented in R and available under GPL-2 license from the Bioconductor website (http://bioconductor.org/packages/TFBSTools/). Contact: [email protected] Supplementary information: Supplementary data are available at Bioinformatics online

Relating geometry descriptions to its derivatives on the web

Sharing building information over the Web is becoming more popular, leading to advances in describing building models in a Semantic Web context. However, those descriptions lack unified approaches for linking geometry descriptions to building elements, derived properties and derived other geometry descriptions. To bridge this gap, we analyse the basic characteristics of geometric dependencies and propose the Ontology for Managing Geometry (OMG) based on this analysis. In this paper, we present our results and show how the OMG provides means to link geometric and non-geometric data in meaningful ways. Thus, exchanging building data, including geometry, on the Web becomes more efficient

Semantic Modelling Approach for Safety-Related Traffic Information Using DATEX II

The significance of Linked Open Data datasets for traffic information extends beyond just including open traffic data. It incorporates links to other relevant thematic datasets available on the web. This enables federated queries across different data platforms from various countries and sectors, such as transport, geospatial, environmental, weather, and more. Businesses, researchers, national operators, administrators, and citizens at large can benefit from having dynamic traffic open data connected to heterogeneous datasets across Member States. This paper focuses on the development of a semantic model that enhances the basic service to access open traffic data through a LOD-enhanced Traffic Information System in alignment with the ITS Directive (2010/40/EU). The objective is not limited to just viewing or downloading data but also to improve the extraction of meaningful information and enable other types of services that are only achievable through LOD. By structuring the information using the RDF format meant for machines and employing SPARQL for querying, LOD allows for comprehensive and unified access to all datasets. Considering that the European standard DATEX II is widely used in many priority areas and services mentioned in the ITS Directive, LOD DATEX II was developed as a complementary approach to DATEX II XML. This facilitates the accessibility and comprehensibility of European traffic data and services. As part of this development, an ontological model called dtx_srti, based on the DATEX II Ontology, was created to support these efforts