Performance impact of programmer-inserted Data Prefetches for irregular access patterns with a case study of FMM VList algorithm

textData Prefetching is a well-known technique to speed up applications wherein hardware prefetchers or compilers speculatively prefetch data into caches closer to the processor to ensure it’s readily available when the processor demands it. Since incorrect speculation leads to prefetching useless data which, in turn, results in wasting memory bandwidth and polluting caches, prefetch mechanisms are usually conservative and prefetch on spotting fairly regular access patterns only. This gives the programmer with a knowledge of application, an opportunity to insert fine-grain software prefetches in the code to clinically prefetch the data that is certain to be demanded but whose access pattern is not too obvious for hardware prefetchers or compiler to detect. In this study, the author demonstrates the performance improvement obtained by such programmer-inserted prefetches with the case study of an FMM (Fast Multipole Method) VList application kernel run with several different configurations. The VList computation requires computing the Hadamard product of matrices. However, the way each node of the octree is stored in the memory, leads to indirect accessing of elements where memory accesses themselves are not sequential but the pointers pointing to those memory locations are still stored sequentially. Since compilers do not insert prefetches for indirect accesses, and to hardware, the access pattern appears random, programmer-inserted prefetching is the only solution for such a case. The author demonstrates the performance gain obtained by employing different prefetching choices in terms of what all structures in the code to prefetch and which level of cache to prefetch those to and also presents an analysis of the impact of different configuration parameters on performance gain. The author shows that there are several prefetching combinations which always bring performance gain without ever hurting the performance, and also identifies prefetching to L1 cache and prefetching all data structures in question, as the best prefetching recommendation for this application kernel. It is shown that this one combination gets the highest performance gain for most run configurations and an average performance gain of 10.14% across all run configurations.Electrical and Computer Engineerin

SAMIE-LSQ: set-associative multiple-instruction entry load/store queue

The load/store queue (LSQ) is one of the most complex parts of contemporary processors. Its latency is critical for the processor performance and it is usually one of the processor hotspots. This paper presents a highly banked, set-associative, multiple-instruction entry LSQ (SAMIE-LSQ,) that achieves high performance with small energy requirements. The SAMIE-LSQ classifies the memory instructions (loads and stores) based on the address to be accessed, and groups those instructions accessing the same cache line in the same entry. Our approach relies on the fact that many in-flight memory instructions access the same cache lines. Each SAMIE-LSQ entry has space for several memory instructions accessing the same cache line. This arrangement has a number of advantages. First, it significantly reduces the address comparison activity needed for memory disambiguation since there are less addresses to be compared. It also reduces the activity in the data TLB, the cache tag and cache data arrays. This is achieved by caching the cache line location and address translation in the corresponding SAMIE-LSQ entry once the access of one of the instructions in an entry is performed, so instructions that share an entry can reuse the translation, avoid the tag check and get the data directly from the concrete cache way without checking the others. Besides, the delay of the proposed scheme is lower than that required by a conventional LSQ. We show that the SAMIE-LSQ saves 82% dynamic energy for the load/store queue, 42% for the LI data cache and 73% for the data TLB, with a negligible impact on performance (0.6%)Peer ReviewedPostprint (published version

On the performance of broadcast algorithms in interconnection networks

Broadcast Communication is among the most primitive collective capabilities of any message passing network. Broadcast algorithms for the mesh have been widely reported in the literature. However, most existing algorithms have been studied within limited conditions, such as light traffic load and fixed network sizes. In other words, most of these algorithms have not been studied at different Quality of Service (QoS) levels. In contrast, this study examines the broadcast operation, taking into account the scalability, parallelism, a wide range of traffic loads through the propagation of broadcast messages. To the best of our knowledge, this study is the first to consider the issue of broadcast latency at both the network and node levels across different traffic loads. Results are shown from a comparative analysis confirming that the coded-path based broadcast algorithms exhibit superior performance characteristics over some existing algorithms

Convolutional neural nets for estimating the run time and energy consumption of the sparse matrix-vector product

Modeling the performance and energy consumption of the sparse matrix-vector product (SpMV) is essential to perform off-line analysis and, for example, choose a target computer architecture that delivers the best performance-energy consumption ratio. However, this task is especially complex given the memory-bounded nature and irregular memory accesses of the SpMV, mainly dictated by the input sparse matrix. In this paper, we propose a Machine Learning (ML)-driven approach that leverages Convolutional Neural Networks (CNNs) to provide accurate estimations of the performance and energy consumption of the SpMV kernel. The proposed CNN-based models use a blockwise approach to make the CNN architecture independent of the matrix size. These models are trained to estimate execution time as well as total, package, and DRAM energy consumption at different processor frequencies. The experimental results reveal that the overall relative error ranges between 0.5% and 14%, while at matrix level is not superior to 10%. To demonstrate the applicability and accuracy of the SpMV CNN-based models, this study is complemented with an ad-hoc time-energy model for the PageRank algorithm, a popular algorithm for web information retrieval used by search engines, which internally realizes the SpMV kernel

A Social Network Analysis of Edward Snowden and the Diffusion of Different Media Frames

textThis paper provides insights on how five different frames of the Edward Snowden issue (Hero, Patriot, Traitor, Whistleblower, Dissident) have been diffused on the Twitter platform. This study uses NodeXL to collect, analyze and visualize all the tweets including the keyword “Edward Snowden” from February 17 to April 10, 2014 to examine the flow of information and the interaction between opinion leaders along with the characteristics of opinion leaders in this specific issue. Findings provide insight about future strategic communication for general branding and public image maintenance.Advertisin

Exploiting data locality in cache-coherent NUMA systems

The end of Dennard scaling has caused a stagnation of the clock frequency in computers.To overcome this issue, in the last two decades vendors have been integrating larger numbers of processing elements in the systems, interconnecting many nodes, including multiple chips in the nodes and increasing the number of cores in each chip. The speed of main memory has not evolved at the same rate as processors, it is much slower and there is a need to provide more total bandwidth to the processors, especially with the increase in the number of cores and chips. Still keeping a shared address space, where all processors can access the whole memory, solutions have come by integrating more memories: by using newer technologies like high-bandwidth memories (HBM) and non-volatile memories (NVM), by giving groups cores (like sockets, for example) faster access to some subset of the DRAM, or by combining many of these solutions. This has caused some heterogeneity in the access speed to main memory, depending on the CPU requesting access to a memory address and the actual physical location of that address, causing non-uniform memory access (NUMA) behaviours. Moreover, many of these systems are cache-coherent (ccNUMA), meaning that changes in the memory done from one CPU must be visible by the other CPUs and transparent for the programmer. These NUMA behaviours reduce the performance of applications and can pose a challenge to the programmers. To tackle this issue, this thesis proposes solutions, at the software and hardware levels, to improve the data locality in NUMA systems and, therefore, the performance of applications in these computer systems. The first contribution shows how considering hardware prefetching simultaneously with thread and data placement in NUMA systems can find configurations with better performance than considering these aspects separately. The performance results combined with performance counters are then used to build a performance model to predict, both offline and online, the best configuration for new applications not in the model. The evaluation is done using two different high performance NUMA systems, and the performance counters collected in one machine are used to predict the best configurations in the other machine. The second contribution builds on the idea that prefetching can have a strong effect in NUMA systems and proposes a NUMA-aware hardware prefetching scheme. This scheme is generic and can be applied to multiple hardware prefetchers with a low hardware cost but giving very good results. The evaluation is done using a cycle-accurate architectural simulator and provides detailed results of the performance, the data transfer reduction and the energy costs. Finally, the third and last contribution consists in scheduling algorithms for task-based programming models. These programming models help improve the programmability of applications in parallel systems and also provide useful information to the underlying runtime system. This information is used to build a task dependency graph (TDG), a directed acyclic graph that models the application where the nodes are sequential pieces of code known as tasks and the edges are the data dependencies between the different tasks. The proposed scheduling algorithms use graph partitioning techniques and provide a scheduling for the tasks in the TDG that minimises the data transfers between the different NUMA regions of the system. The results have been evaluated in real ccNUMA systems with multiple NUMA regions.La fi de la llei de Dennard ha provocat un estancament de la freqüència de rellotge dels computadors. Amb l'objectiu de superar aquest fet, durant les darreres dues dècades els fabricants han integrat més quantitat d'unitats de còmput als sistemes mitjançant la interconnexió de nodes diferents, la inclusió de múltiples xips als nodes i l'increment de nuclis de processador a cada xip. La rapidesa de la memòria principal no ha evolucionat amb el mateix factor que els processadors; és molt més lenta i hi ha la necessitat de proporcionar més ample de banda als processadors, especialment amb l'increment del nombre de nuclis i xips. Tot mantenint un adreçament compartit en el qual tots els processadors poden accedir a la memòria sencera, les solucions han estat al voltant de la integració de més memòries: amb tecnologies modernes com HBM (high-bandwidth memories) i NVM (non-volatile memories), fent que grups de nuclis (com sòcols sencers) tinguin accés més ràpid a una part de la DRAM o amb la combinació de solucions. Això ha provocat una heterogeneïtat en la velocitat d'accés a la memòria principal, en funció del nucli que sol·licita l'accés a una adreça en particular i la seva localització física, fet que provoca uns comportaments no uniformes en l'accés a la memòria (non-uniform memory access, NUMA). A més, sovint tenen memòries cau coherents (cache-coherent NUMA, ccNUMA), que implica que qualsevol canvi fet a la memòria des d'un nucli d'un processador ha de ser visible la resta de manera transparent. Aquests comportaments redueixen el rendiment de les aplicacions i suposen un repte. Per abordar el problema, a la tesi s'hi proposen solucions, a nivell de programari i maquinari, que milloren la localitat de dades als sistemes NUMA i, en conseqüència, el rendiment de les aplicacions en aquests sistemes. La primera contribució mostra que, quan es tenen en compte alhora la precàrrega d'adreces de memòria amb maquinari (hardware prefetching) i les decisions d'ubicació dels fils d'execució i les dades als sistemes NUMA, es poden trobar millors configuracions que quan es condieren per separat. Una combinació dels resultats de rendiment i dels comptadors disponibles al sistema s'utilitza per construir un model de rendiment per fer la predicció, tant per avançat com també en temps d'execució, de la millor configuració per aplicacions que no es troben al model. L'avaluació es du a terme a dos sistemes NUMA d'alt rendiment, i els comptadors mesurats en un sistema s'usen per predir les millors configuracions a l'altre sistema. La segona contribució es basa en la idea que el prefetching pot tenir un efecte considerable als sistemes NUMA i proposa un esquema de precàrrega a nivell de maquinari que té en compte els efectes NUMA. L'esquema és genèric i es pot aplicar als algorismes de precàrrega existents amb un cost de maquinari molt baix però amb molt bons resultats. S'avalua amb un simulador arquitectural acurat a nivell de cicle i proporciona resultats detallats del rendiment, la reducció de les comunicacions de dades i els costos energètics. La tercera i darrera contribució consisteix en algorismes de planificació per models de programació basats en tasques. Aquests simplifiquen la programabilitat de les aplicacions paral·leles i proveeixen informació molt útil al sistema en temps d'execució (runtime system) que en controla el funcionament. Amb aquesta informació es construeix un graf de dependències entre tasques (task dependency graph, TDG), un graf dirigit i acíclic que modela l'aplicació i en el qual els nodes són fragments de codi seqüencial (o tasques) i els arcs són les dependències de dades entre les tasques. Els algorismes de planificació proposats fan servir tècniques de particionat de grafs i proporcionen una planificació de les tasques del TDG que minimitza la comunicació de dades entre les diferents regions NUMA del sistema. Els resultats han estat avaluats en sistemes ccNUMA reals amb múltiples regions NUMA.El final de la ley de Dennard ha provocado un estancamiento de la frecuencia de reloj de los computadores. Con el objetivo de superar este problema, durante las últimas dos décadas los fabricantes han integrado más unidades de cómputo en los sistemas mediante la interconexión de nodos diferentes, la inclusión de múltiples chips en los nodos y el incremento de núcleos de procesador en cada chip. La rapidez de la memoria principal no ha evolucionado con el mismo factor que los procesadores; es mucho más lenta y hay la necesidad de proporcionar más ancho de banda a los procesadores, especialmente con el incremento del número de núcleos y chips. Aun manteniendo un sistema de direccionamiento compartido en el que todos los procesadores pueden acceder al conjunto de la memoria, las soluciones han oscilado alrededor de la integración de más memorias: usando tecnologías modernas como las memorias de alto ancho de banda (highbandwidth memories, HBM) y memorias no volátiles (non-volatile memories, NVM), haciendo que grupos de núcleos (como zócalos completos) tengan acceso más veloz a un subconjunto de la DRAM, o con la combinación de soluciones. Esto ha provocado una heterogeneidad en la velocidad de acceso a la memoria principal, en función del núcleo que solicita el acceso a una dirección de memoria en particular y la ubicación física de esta dirección, lo que provoca unos comportamientos no uniformes en el acceso a la memoria (non-uniform memory access, NUMA). Además, muchos de estos sistemas tienen memorias caché coherentes (cache-coherent NUMA, ccNUMA), lo que implica que cualquier cambio hecho en la memoria desde un núcleo de un procesador debe ser visible por el resto de procesadores de forma transparente para los programadores. Estos comportamientos NUMA reducen el rendimiento de las aplicaciones y pueden suponer un reto para los programadores. Para abordar dicho problema, en esta tesis se proponen soluciones, a nivel de software y hardware, que mejoran la localidad de datos en los sistemas NUMA y, en consecuencia, el rendimiento de las aplicaciones en estos sistemas informáticos. La primera contribución muestra que, cuando se tienen en cuenta a la vez la precarga de direcciones de memoria mediante hardware (o hardware prefetching ) y las decisiones de la ubicación de los hilos de ejecución y los datos en los sistemas NUMA, se pueden hallar mejores configuraciones que cuando se consideran ambos aspectos por separado. Con una combinación de los resultados de rendimiento y de los contadores disponibles en el sistema se construye un modelo de rendimiento, tanto por avanzado como en en tiempo de ejecución, de la mejor configuración para aplicaciones que no están incluidas en el modelo. La evaluación se realiza en dos sistemas NUMA de alto rendimiento, y los contadores medidos en uno de los sistemas se usan para predecir las mejores configuraciones en el otro sistema. La segunda contribución se basa en la idea de que el prefetching puede tener un efecto considerable en los sistemas NUMA y propone un esquema de precarga a nivel hardware que tiene en cuenta los efectos NUMA. Este esquema es genérico y se puede aplicar a diferentes algoritmos de precarga existentes con un coste de hardware muy bajo pero que proporciona muy buenos resultados. Dichos resultados se obtienen y evalúan mediante un simulador arquitectural preciso a nivel de ciclo y proporciona resultados detallados del rendimiento, la reducción de las comunicaciones de datos y los costes energéticos. Finalmente, la tercera y última contribución consiste en algoritmos de planificación para modelos de programación basados en tareas. Estos modelos simplifican la programabilidad de las aplicaciones paralelas y proveen información muy útil al sistema en tiempo de ejecución (runtime system) que controla su funcionamiento. Esta información se utiliza para construir un grafo de dependencias entre tareas (task dependency graph, TDG), un grafo dirigido y acíclico que modela la aplicación y en el ue los nodos son fragmentos de código secuencial, conocidos como tareas, y los arcos son las dependencias de datos entre las distintas tareas. Los algoritmos de planificación que se proponen usan técnicas e particionado de grafos y proporcionan una planificación de las tareas del TDG que minimiza la comunicación de datos entre las distintas regiones NUMA del sistema. Los resultados se han evaluado en sistemas ccNUMA reales con múltiples regiones NUMA.Postprint (published version