ParaFPGA 2013: Harnessing Programs, Power and Performance in Parallel FPGA applications

Future computing systems will require dedicated accelerators to achieve high-performance. The mini-symposium ParaFPGA explores parallel computing with FPGAs as an interesting avenue to reduce the gap between the architecture and the application. Topics discussed are the power of functional and dataflow languages, the performance of high-level synthesis tools, the automatic creation of hardware multi-cores using C-slow retiming, dynamic power management to control the energy consumption, real-time reconfiguration of streaming image processing filters and memory optimized event image segmentation

Exploring the Performance Benefit of Hybrid Memory System on HPC Environments

Hardware accelerators have become a de-facto standard to achieve high performance on current supercomputers and there are indications that this trend will increase in the future. Modern accelerators feature high-bandwidth memory next to the computing cores. For example, the Intel Knights Landing (KNL) processor is equipped with 16 GB of high-bandwidth memory (HBM) that works together with conventional DRAM memory. Theoretically, HBM can provide 5x higher bandwidth than conventional DRAM. However, many factors impact the effective performance achieved by applications, including the application memory access pattern, the problem size, the threading level and the actual memory configuration. In this paper, we analyze the Intel KNL system and quantify the impact of the most important factors on the application performance by using a set of applications that are representative of scientific and data-analytics workloads. Our results show that applications with regular memory access benefit from MCDRAM, achieving up to 3x performance when compared to the performance obtained using only DRAM. On the contrary, applications with random memory access pattern are latency-bound and may suffer from performance degradation when using only MCDRAM. For those applications, the use of additional hardware threads may help hide latency and achieve higher aggregated bandwidth when using HBM

Data Provenance and Management in Radio Astronomy: A Stream Computing Approach

New approaches for data provenance and data management (DPDM) are required for mega science projects like the Square Kilometer Array, characterized by extremely large data volume and intense data rates, therefore demanding innovative and highly efficient computational paradigms. In this context, we explore a stream-computing approach with the emphasis on the use of accelerators. In particular, we make use of a new generation of high performance stream-based parallelization middleware known as InfoSphere Streams. Its viability for managing and ensuring interoperability and integrity of signal processing data pipelines is demonstrated in radio astronomy. IBM InfoSphere Streams embraces the stream-computing paradigm. It is a shift from conventional data mining techniques (involving analysis of existing data from databases) towards real-time analytic processing. We discuss using InfoSphere Streams for effective DPDM in radio astronomy and propose a way in which InfoSphere Streams can be utilized for large antennae arrays. We present a case-study: the InfoSphere Streams implementation of an autocorrelating spectrometer, and using this example we discuss the advantages of the stream-computing approach and the utilization of hardware accelerators

The GPU vs Phi Debate: Risk Analytics Using Many-Core Computing

The risk of reinsurance portfolios covering globally occurring natural catastrophes, such as earthquakes and hurricanes, is quantified by employing simulations. These simulations are computationally intensive and require large amounts of data to be processed. The use of many-core hardware accelerators, such as the Intel Xeon Phi and the NVIDIA Graphics Processing Unit (GPU), are desirable for achieving high-performance risk analytics. In this paper, we set out to investigate how accelerators can be employed in risk analytics, focusing on developing parallel algorithms for Aggregate Risk Analysis, a simulation which computes the Probable Maximum Loss of a portfolio taking both primary and secondary uncertainties into account. The key result is that both hardware accelerators are useful in different contexts; without taking data transfer times into account the Phi had lowest execution times when used independently and the GPU along with a host in a hybrid platform yielded best performance.Comment: A modified version of this article is accepted to the Computers and Electrical Engineering Journal under the title - "The Hardware Accelerator Debate: A Financial Risk Case Study Using Many-Core Computing"; Blesson Varghese, "The Hardware Accelerator Debate: A Financial Risk Case Study Using Many-Core Computing," Computers and Electrical Engineering, 201

Multi-Tenant Virtual GPUs for Optimising Performance of a Financial Risk Application

Graphics Processing Units (GPUs) are becoming popular accelerators in modern High-Performance Computing (HPC) clusters. Installing GPUs on each node of the cluster is not efficient resulting in high costs and power consumption as well as underutilisation of the accelerator. The research reported in this paper is motivated towards the use of few physical GPUs by providing cluster nodes access to remote GPUs on-demand for a financial risk application. We hypothesise that sharing GPUs between several nodes, referred to as multi-tenancy, reduces the execution time and energy consumed by an application. Two data transfer modes between the CPU and the GPUs, namely concurrent and sequential, are explored. The key result from the experiments is that multi-tenancy with few physical GPUs using sequential data transfers lowers the execution time and the energy consumed, thereby improving the overall performance of the application.Comment: Accepted to the Journal of Parallel and Distributed Computing (JPDC), 10 June 201

High-Precision Numerical Simulations of Rotating Black Holes Accelerated by CUDA

Hardware accelerators (such as Nvidia's CUDA GPUs) have tremendous promise for computational science, because they can deliver large gains in performance at relatively low cost. In this work, we focus on the use of Nvidia's Tesla GPU for high-precision (double, quadruple and octal precision) numerical simulations in the area of black hole physics -- more specifically, solving a partial-differential-equation using finite-differencing. We describe our approach in detail and present the final performance results as compared with a single-core desktop processor and also the Cell BE. We obtain mixed results -- order-of-magnitude gains in overall performance in some cases and negligible gains in others.Comment: 6 pages, 1 figure, 1 table, Accepted for publication in the International Conference on High Performance Computing Systems (HPCS 2010