Direct blockmodeling of valued and binary networks: a dichotomization-free approach

A long-standing open problem with direct blockmodeling is that it is explicitly intended for binary, not valued, networks. The underlying dilemma is how empirical valued blocks can be compared with ideal binary blocks, an intrinsic problem in the direct approach where partitions are solely determined through such comparisons. Addressing this dilemma, valued networks have either been dichotomized into binary versions, or novel types of ideal valued blocks have been introduced. Both these workarounds are problematic in terms of interpretability, unwanted data reduction, and the often arbitrary setting of model parameters. This paper proposes a direct blockmodeling approach that effectively bypasses the dilemma with blockmodeling of valued networks. By introducing an adaptive weighted correlation-based criteria function, the proposed approach is directly applicable to both binary and valued networks, without any form of dichotomization or transformation of the valued (or binary) data at any point in the analysis, while still using the conventional set of ideal binary blocks from structural, regular and generalized blockmodeling. The approach is demonstrated by structural, regular and generalized blockmodeling applications of six classical binary and valued networks. Finding feasible and intuitive optimal solutions in both the binary and valued examples, the approach is proposed not only as a practical, dichotomization-free heuristic for blockmodeling of valued networks but also, through its additional benefits, as an alternative to the conventional direct approach to blockmodeling

Generating global network structures by triad types

This paper addresses the question of whether it is possible to generate networks with a given global structure (defined by selected blockmodels, i.e., cohesive, core-periphery, hierarchical and transitivity), considering only different types of triads. Two methods are used to generate networks: (i) the method of relocating links; and (ii) the Monte Carlo Multi Chain algorithm implemented in the "ergm" package implemented in R. Although all types of triads can generate networks with the selected blockmodel types, the selection of only a subset of triads improves the generated networks' blockmodel structure. However, in the case of a hierarchical blockmodel without complete blocks on the diagonal, additional local structures are needed to achieve the desired global structure of generated networks. This shows that blockmodels can emerge based on only local processes that do not take attributes into account

Generalized Blockmodeling with Pajek

Abstract One goal of blockmodeling is to reduce a large, potentially incoherent network to a smaller comprehensible structure that can be interpreted more readily. Batagelj, Doreian, and Ferligoj developed a generalized approach to blockmodeling and methods where a set of observed relations are fitted to a pre-specified blockmodel. In the paper this generalized blockmodeling approach as implemented in program Pajek is described. An overview of the blockmodeling procedures in Pajek is given and is illustrated by some examples

A Triclustering Approach for Time Evolving Graphs

This paper introduces a novel technique to track structures in time evolving graphs. The method is based on a parameter free approach for three-dimensional co-clustering of the source vertices, the target vertices and the time. All these features are simultaneously segmented in order to build time segments and clusters of vertices whose edge distributions are similar and evolve in the same way over the time segments. The main novelty of this approach lies in that the time segments are directly inferred from the evolution of the edge distribution between the vertices, thus not requiring the user to make an a priori discretization. Experiments conducted on a synthetic dataset illustrate the good behaviour of the technique, and a study of a real-life dataset shows the potential of the proposed approach for exploratory data analysis

Role models for complex networks

We present a framework for automatically decomposing ("block-modeling") the functional classes of agents within a complex network. These classes are represented by the nodes of an image graph ("block model") depicting the main patterns of connectivity and thus functional roles in the network. Using a first principles approach, we derive a measure for the fit of a network to any given image graph allowing objective hypothesis testing. From the properties of an optimal fit, we derive how to find the best fitting image graph directly from the network and present a criterion to avoid overfitting. The method can handle both two-mode and one-mode data, directed and undirected as well as weighted networks and allows for different types of links to be dealt with simultaneously. It is non-parametric and computationally efficient. The concepts of structural equivalence and modularity are found as special cases of our approach. We apply our method to the world trade network and analyze the roles individual countries play in the global economy

Generalized Blockmodeling of Multi-Valued Networks

This research presents an extension to generalized blockmodeling where there are more than two types of objects to be clustered based on valued network data. We use the ideas in homogeneity blockmodeling to develop an optimization model to perform the clustering of the objects and the resulting partitioning of the ties so as to minimize the inconsistency of an empirical block with an ideal block. The ideal block types used in this modeling are null (all zeros), complete (all ones) and valued. Two case studies are presented: the Southern Women dataset and a larger example using a subset of the IMDb movie dataset

Clustering and Community Detection in Directed Networks: A Survey

Networks (or graphs) appear as dominant structures in diverse domains, including sociology, biology, neuroscience and computer science. In most of the aforementioned cases graphs are directed - in the sense that there is directionality on the edges, making the semantics of the edges non symmetric. An interesting feature that real networks present is the clustering or community structure property, under which the graph topology is organized into modules commonly called communities or clusters. The essence here is that nodes of the same community are highly similar while on the contrary, nodes across communities present low similarity. Revealing the underlying community structure of directed complex networks has become a crucial and interdisciplinary topic with a plethora of applications. Therefore, naturally there is a recent wealth of research production in the area of mining directed graphs - with clustering being the primary method and tool for community detection and evaluation. The goal of this paper is to offer an in-depth review of the methods presented so far for clustering directed networks along with the relevant necessary methodological background and also related applications. The survey commences by offering a concise review of the fundamental concepts and methodological base on which graph clustering algorithms capitalize on. Then we present the relevant work along two orthogonal classifications. The first one is mostly concerned with the methodological principles of the clustering algorithms, while the second one approaches the methods from the viewpoint regarding the properties of a good cluster in a directed network. Further, we present methods and metrics for evaluating graph clustering results, demonstrate interesting application domains and provide promising future research directions.Comment: 86 pages, 17 figures. Physics Reports Journal (To Appear