Contour Based 3D Biological Image Reconstruction and Partial Retrieval

Image segmentation is one of the most difficult tasks in image processing. Segmentation algorithms are generally based on searching a region where pixels share similar gray level intensity and satisfy a set of defined criteria. However, the segmented region cannot be used directly for partial image retrieval. In this dissertation, a Contour Based Image Structure (CBIS) model is introduced. In this model, images are divided into several objects defined by their bounding contours. The bounding contour structure allows individual object extraction, and partial object matching and retrieval from a standard CBIS image structure. The CBIS model allows the representation of 3D objects by their bounding contours which is suitable for parallel implementation particularly when extracting contour features and matching them for 3D images require heavy computations. This computational burden becomes worse for images with high resolution and large contour density. In this essence we designed two parallel algorithms; Contour Parallelization Algorithm (CPA) and Partial Retrieval Parallelization Algorithm (PRPA). Both algorithms have considerably improved the performance of CBIS for both contour shape matching as well as partial image retrieval. To improve the effectiveness of CBIS in segmenting images with inhomogeneous backgrounds we used the phase congruency invariant features of Fourier transform components to highlight boundaries of objects prior to extracting their contours. The contour matching process has also been improved by constructing a fuzzy contour matching system that allows unbiased matching decisions. Further improvements have been achieved through the use of a contour tailored Fourier descriptor to make translation and rotation invariance. It is proved to be suitable for general contour shape matching where translation, rotation, and scaling invariance are required. For those images which are hard to be classified by object contours such as bacterial images, we define a multi-level cosine transform to extract their texture features for image classification. The low frequency Discrete Cosine Transform coefficients and Zenike moments derived from images are trained by Support Vector Machine (SVM) to generate multiple classifiers

Data-Driven Shape Analysis and Processing

Data-driven methods play an increasingly important role in discovering geometric, structural, and semantic relationships between 3D shapes in collections, and applying this analysis to support intelligent modeling, editing, and visualization of geometric data. In contrast to traditional approaches, a key feature of data-driven approaches is that they aggregate information from a collection of shapes to improve the analysis and processing of individual shapes. In addition, they are able to learn models that reason about properties and relationships of shapes without relying on hard-coded rules or explicitly programmed instructions. We provide an overview of the main concepts and components of these techniques, and discuss their application to shape classification, segmentation, matching, reconstruction, modeling and exploration, as well as scene analysis and synthesis, through reviewing the literature and relating the existing works with both qualitative and numerical comparisons. We conclude our report with ideas that can inspire future research in data-driven shape analysis and processing.Comment: 10 pages, 19 figure

Biologically Inspired Approaches to Automated Feature Extraction and Target Recognition

Ongoing research at Boston University has produced computational models of biological vision and learning that embody a growing corpus of scientific data and predictions. Vision models perform long-range grouping and figure/ground segmentation, and memory models create attentionally controlled recognition codes that intrinsically cornbine botton-up activation and top-down learned expectations. These two streams of research form the foundation of novel dynamically integrated systems for image understanding. Simulations using multispectral images illustrate road completion across occlusions in a cluttered scene and information fusion from incorrect labels that are simultaneously inconsistent and correct. The CNS Vision and Technology Labs (cns.bu.edulvisionlab and cns.bu.edu/techlab) are further integrating science and technology through analysis, testing, and development of cognitive and neural models for large-scale applications, complemented by software specification and code distribution.Air Force Office of Scientific Research (F40620-01-1-0423); National Geographic-Intelligence Agency (NMA 201-001-1-2016); National Science Foundation (SBE-0354378; BCS-0235298); Office of Naval Research (N00014-01-1-0624); National Geospatial-Intelligence Agency and the National Society of Siegfried Martens (NMA 501-03-1-2030, DGE-0221680); Department of Homeland Security graduate fellowshi

Representations for Cognitive Vision : a Review of Appearance-Based, Spatio-Temporal, and Graph-Based Approaches

The emerging discipline of cognitive vision requires a proper representation of visual information including spatial and temporal relationships, scenes, events, semantics and context. This review article summarizes existing representational schemes in computer vision which might be useful for cognitive vision, a and discusses promising future research directions. The various approaches are categorized according to appearance-based, spatio-temporal, and graph-based representations for cognitive vision. While the representation of objects has been covered extensively in computer vision research, both from a reconstruction as well as from a recognition point of view, cognitive vision will also require new ideas how to represent scenes. We introduce new concepts for scene representations and discuss how these might be efficiently implemented in future cognitive vision systems

Automatic Structural Scene Digitalization

In this paper, we present an automatic system for the analysis and labeling of structural scenes, floor plan drawings in Computer-aided Design (CAD) format. The proposed system applies a fusion strategy to detect and recognize various components of CAD floor plans, such as walls, doors, windows and other ambiguous assets. Technically, a general rule-based filter parsing method is fist adopted to extract effective information from the original floor plan. Then, an image-processing based recovery method is employed to correct information extracted in the first step. Our proposed method is fully automatic and real-time. Such analysis system provides high accuracy and is also evaluated on a public website that, on average, archives more than ten thousands effective uses per day and reaches a relatively high satisfaction rate.Comment: paper submitted to PloS On

The Optimisation of Elementary and Integrative Content-Based Image Retrieval Techniques

Image retrieval plays a major role in many image processing applications. However, a number of factors (e.g. rotation, non-uniform illumination, noise and lack of spatial information) can disrupt the outputs of image retrieval systems such that they cannot produce the desired results. In recent years, many researchers have introduced different approaches to overcome this problem. Colour-based CBIR (content-based image retrieval) and shape-based CBIR were the most commonly used techniques for obtaining image signatures. Although the colour histogram and shape descriptor have produced satisfactory results for certain applications, they still suffer many theoretical and practical problems. A prominent one among them is the well-known “curse of dimensionality “. In this research, a new Fuzzy Fusion-based Colour and Shape Signature (FFCSS) approach for integrating colour-only and shape-only features has been investigated to produce an effective image feature vector for database retrieval. The proposed technique is based on an optimised fuzzy colour scheme and robust shape descriptors. Experimental tests were carried out to check the behaviour of the FFCSS-based system, including sensitivity and robustness of the proposed signature of the sampled images, especially under varied conditions of, rotation, scaling, noise and light intensity. To further improve retrieval efficiency of the devised signature model, the target image repositories were clustered into several groups using the k-means clustering algorithm at system runtime, where the search begins at the centres of each cluster. The FFCSS-based approach has proven superior to other benchmarked classic CBIR methods, hence this research makes a substantial contribution towards corresponding theoretical and practical fronts

Fast character modeling with sketch-based PDE surfaces

© 2020, The Author(s). Virtual characters are 3D geometric models of characters. They have a lot of applications in multimedia. In this paper, we propose a new physics-based deformation method and efficient character modelling framework for creation of detailed 3D virtual character models. Our proposed physics-based deformation method uses PDE surfaces. Here PDE is the abbreviation of Partial Differential Equation, and PDE surfaces are defined as sculpting force-driven shape representations of interpolation surfaces. Interpolation surfaces are obtained by interpolating key cross-section profile curves and the sculpting force-driven shape representation uses an analytical solution to a vector-valued partial differential equation involving sculpting forces to quickly obtain deformed shapes. Our proposed character modelling framework consists of global modeling and local modeling. The global modeling is also called model building, which is a process of creating a whole character model quickly with sketch-guided and template-based modeling techniques. The local modeling produces local details efficiently to improve the realism of the created character model with four shape manipulation techniques. The sketch-guided global modeling generates a character model from three different levels of sketched profile curves called primary, secondary and key cross-section curves in three orthographic views. The template-based global modeling obtains a new character model by deforming a template model to match the three different levels of profile curves. Four shape manipulation techniques for local modeling are investigated and integrated into the new modelling framework. They include: partial differential equation-based shape manipulation, generalized elliptic curve-driven shape manipulation, sketch assisted shape manipulation, and template-based shape manipulation. These new local modeling techniques have both global and local shape control functions and are efficient in local shape manipulation. The final character models are represented with a collection of surfaces, which are modeled with two types of geometric entities: generalized elliptic curves (GECs) and partial differential equation-based surfaces. Our experiments indicate that the proposed modeling approach can build detailed and realistic character models easily and quickly

SHREC'16: partial matching of deformable shapes

Matching deformable 3D shapes under partiality transformations is a challenging problem that has received limited focus in the computer vision and graphics communities. With this benchmark, we explore and thoroughly investigate the robustness of existing matching methods in this challenging task. Participants are asked to provide a point-to-point correspondence (either sparse or dense) between deformable shapes undergoing different kinds of partiality transformations, resulting in a total of 400 matching problems to be solved for each method - making this benchmark the biggest and most challenging of its kind. Five matching algorithms were evaluated in the contest; this paper presents the details of the dataset, the adopted evaluation measures, and shows thorough comparisons among all competing methods