Focus area extraction by blind deconvolution for defining regions of interest

We present an automatic focus area estimation method, working with a single image without a priori information about the image, the camera or the scene. It produces relative focus maps by localized blind deconvolution and a new residual error based classification. Evaluation and comparison is performed, and applicability is shown through image indexing

Optimal stopping condition for iterative image deconvolution by new orthogonality criterion

The stopping condition is a common problem for non-regularised deconvolution methods. Introduced is an automatic procedure for estimating the ideal stopping point based on a new measure of independence, checking an orthogonality criterion of the estimated signal and its gradient at a given iteration. An effective lower bound estimate than the conventional ad hoc methods is provided, proving its superiority to the others at a wide range of different noise models

Nonlinear Acoustics and an Inverse Scattering Problem

Abstract This Ph.D is concerned with wave propagation problems. The main focus is on nonlinear acoustics, looking at sonic boom propagation in a physically realistic atmosphere, whilst a secondary part will look at the problem of landmine detection and how to improve the target detection rates. The work on nonlinear acoustics emerged as a desire to model the behaviour of the sonic booms formed by supersonic aircraft in the atmosphere to see what environmental impact they would have on people and animals on the ground, in terms of the form of the sound waves once they reach the ground. The work on landmine detection originated from a Knowledge Transfer Partner- ship between the University of East Anglia (UEA) and Cobham Technical Services (CTS) organised through the Knowledge Transfer Network (KTN). This partnership took the form of a six month internship with work undertaken afterwards to publish the �ndings of the internship.

EEG-Based Quantification of Cortical Current Density and Dynamic Causal Connectivity Generalized across Subjects Performing BCI-Monitored Cognitive Tasks.

Quantification of dynamic causal interactions among brain regions constitutes an important component of conducting research and developing applications in experimental and translational neuroscience. Furthermore, cortical networks with dynamic causal connectivity in brain-computer interface (BCI) applications offer a more comprehensive view of brain states implicated in behavior than do individual brain regions. However, models of cortical network dynamics are difficult to generalize across subjects because current electroencephalography (EEG) signal analysis techniques are limited in their ability to reliably localize sources across subjects. We propose an algorithmic and computational framework for identifying cortical networks across subjects in which dynamic causal connectivity is modeled among user-selected cortical regions of interest (ROIs). We demonstrate the strength of the proposed framework using a "reach/saccade to spatial target" cognitive task performed by 10 right-handed individuals. Modeling of causal cortical interactions was accomplished through measurement of cortical activity using (EEG), application of independent component clustering to identify cortical ROIs as network nodes, estimation of cortical current density using cortically constrained low resolution electromagnetic brain tomography (cLORETA), multivariate autoregressive (MVAR) modeling of representative cortical activity signals from each ROI, and quantification of the dynamic causal interaction among the identified ROIs using the Short-time direct Directed Transfer function (SdDTF). The resulting cortical network and the computed causal dynamics among its nodes exhibited physiologically plausible behavior, consistent with past results reported in the literature. This physiological plausibility of the results strengthens the framework's applicability in reliably capturing complex brain functionality, which is required by applications, such as diagnostics and BCI

Recent Progress in Image Deblurring

This paper comprehensively reviews the recent development of image deblurring, including non-blind/blind, spatially invariant/variant deblurring techniques. Indeed, these techniques share the same objective of inferring a latent sharp image from one or several corresponding blurry images, while the blind deblurring techniques are also required to derive an accurate blur kernel. Considering the critical role of image restoration in modern imaging systems to provide high-quality images under complex environments such as motion, undesirable lighting conditions, and imperfect system components, image deblurring has attracted growing attention in recent years. From the viewpoint of how to handle the ill-posedness which is a crucial issue in deblurring tasks, existing methods can be grouped into five categories: Bayesian inference framework, variational methods, sparse representation-based methods, homography-based modeling, and region-based methods. In spite of achieving a certain level of development, image deblurring, especially the blind case, is limited in its success by complex application conditions which make the blur kernel hard to obtain and be spatially variant. We provide a holistic understanding and deep insight into image deblurring in this review. An analysis of the empirical evidence for representative methods, practical issues, as well as a discussion of promising future directions are also presented.Comment: 53 pages, 17 figure

Image formation in synthetic aperture radio telescopes

Next generation radio telescopes will be much larger, more sensitive, have much larger observation bandwidth and will be capable of pointing multiple beams simultaneously. Obtaining the sensitivity, resolution and dynamic range supported by the receivers requires the development of new signal processing techniques for array and atmospheric calibration as well as new imaging techniques that are both more accurate and computationally efficient since data volumes will be much larger. This paper provides a tutorial overview of existing image formation techniques and outlines some of the future directions needed for information extraction from future radio telescopes. We describe the imaging process from measurement equation until deconvolution, both as a Fourier inversion problem and as an array processing estimation problem. The latter formulation enables the development of more advanced techniques based on state of the art array processing. We demonstrate the techniques on simulated and measured radio telescope data.Comment: 12 page

Reducing variability in along-tract analysis with diffusion profile realignment

Diffusion weighted MRI (dMRI) provides a non invasive virtual reconstruction of the brain's white matter structures through tractography. Analyzing dMRI measures along the trajectory of white matter bundles can provide a more specific investigation than considering a region of interest or tract-averaged measurements. However, performing group analyses with this along-tract strategy requires correspondence between points of tract pathways across subjects. This is usually achieved by creating a new common space where the representative streamlines from every subject are resampled to the same number of points. If the underlying anatomy of some subjects was altered due to, e.g. disease or developmental changes, such information might be lost by resampling to a fixed number of points. In this work, we propose to address the issue of possible misalignment, which might be present even after resampling, by realigning the representative streamline of each subject in this 1D space with a new method, coined diffusion profile realignment (DPR). Experiments on synthetic datasets show that DPR reduces the coefficient of variation for the mean diffusivity, fractional anisotropy and apparent fiber density when compared to the unaligned case. Using 100 in vivo datasets from the HCP, we simulated changes in mean diffusivity, fractional anisotropy and apparent fiber density. Pairwise Student's t-tests between these altered subjects and the original subjects indicate that regional changes are identified after realignment with the DPR algorithm, while preserving differences previously detected in the unaligned case. This new correction strategy contributes to revealing effects of interest which might be hidden by misalignment and has the potential to improve the specificity in longitudinal population studies beyond the traditional region of interest based analysis and along-tract analysis workflows.Comment: v4: peer-reviewed round 2 v3 : deleted some old text from before peer-review which was mistakenly included v2 : peer-reviewed version v1: preprint as submitted to journal NeuroImag