A comparison of statistical machine learning methods in heartbeat detection and classification

In health care, patients with heart problems require quick responsiveness in a clinical setting or in the operating theatre. Towards that end, automated classification of heartbeats is vital as some heartbeat irregularities are time consuming to detect. Therefore, analysis of electro-cardiogram (ECG) signals is an active area of research. The methods proposed in the literature depend on the structure of a heartbeat cycle. In this paper, we use interval and amplitude based features together with a few samples from the ECG signal as a feature vector. We studied a variety of classification algorithms focused especially on a type of arrhythmia known as the ventricular ectopic fibrillation (VEB). We compare the performance of the classifiers against algorithms proposed in the literature and make recommendations regarding features, sampling rate, and choice of the classifier to apply in a real-time clinical setting. The extensive study is based on the MIT-BIH arrhythmia database. Our main contribution is the evaluation of existing classifiers over a range sampling rates, recommendation of a detection methodology to employ in a practical setting, and extend the notion of a mixture of experts to a larger class of algorithms

Graph BI & analytics: current state and future challenges

In an increasingly competitive market, making well-informed decisions requires the analysis of a wide range of heterogeneous, large and complex data. This paper focuses on the emerging field of graph warehousing. Graphs are widespread structures that yield a great expressive power. They are used for modeling highly complex and interconnected domains, and efficiently solving emerging big data application. This paper presents the current status and open challenges of graph BI and analytics, and motivates the need for new warehousing frameworks aware of the topological nature of graphs. We survey the topics of graph modeling, management, processing and analysis in graph warehouses. Then we conclude by discussing future research directions and positioning them within a unified architecture of a graph BI and analytics framework.Peer ReviewedPostprint (author's final draft

Extensible metadata management framework for personal data lake

Common Internet users today are inundated with a deluge of diverse data being generated and siloed in a variety of digital services, applications, and a growing body of personal computing devices as we enter the era of the Internet of Things. Alongside potential privacy compromises, users are facing increasing difficulties in managing their data and are losing control over it. There appears to be a de facto agreement in business and scientific fields that there is critical new value and interesting insight that can be attained by users from analysing their own data, if only it can be freed from its silos and combined with other data in meaningful ways. This thesis takes the point of view that users should have an easy-to-use modern personal data management solution that enables them to centralise and efficiently manage their data by themselves, under their full control, for their best interests, with minimum time and efforts. In that direction, we describe the basic architecture of a management solution that is designed based on solid theoretical foundations and state of the art big data technologies. This solution (called Personal Data Lake - PDL) collects the data of a user from a plurality of heterogeneous personal data sources and stores it into a highly-scalable schema-less storage repository. To simplify the user-experience of PDL, we propose a novel extensible metadata management framework (MMF) that: (i) annotates heterogeneous data with rich lineage and semantic metadata, (ii) exploits the garnered metadata for automating data management workflows in PDL – with extensive focus on data integration, and (iii) facilitates the use and reuse of the stored data for various purposes by querying it on the metadata level either directly by the user or through third party personal analytics services. We first show how the proposed MMF is positioned in PDL architecture, and then describe its principal components. Specifically, we introduce a simple yet effective lineage manager for tracking the provenance of personal data in PDL. We then introduce an ontology-based data integration component called SemLinker which comprises two new algorithms; the first concerns generating graph-based representations to express the native schemas of (semi) structured personal data, and the second algorithm metamodels the extracted representations to a common extensible ontology. SemLinker outputs are utilised by MMF to generate user-tailored unified views that are optimised for querying heterogeneous personal data through low-level SPARQL or high-level SQL-like queries. Next, we introduce an unsupervised automatic keyphrase extraction algorithm called SemCluster that specialises in extracting thematically important keyphrases from unstructured data, and associating each keyphrase with ontological information drawn from an extensible WordNet-based ontology. SemCluster outputs serve as semantic metadata and are utilised by MMF to annotate unstructured contents in PDL, thus enabling various management functionalities such as relationship discovery and semantic search. Finally, we describe how MMF can be utilised to perform holistic integration of personal data and jointly querying it in native representations

Efficient similarity computations on parallel machines using data shaping

Similarity computation is a fundamental operation in all forms of data. Big Data is, typically, characterized by attributes such as volume, velocity, variety, veracity, etc. In general, Big Data variety appears as structured, semi-structured or unstructured forms. The volume of Big Data in general, and semi-structured data in particular, is increasing at a phenomenal rate. Big Data phenomenon is posing new set of challenges to similarity computation problems occurring in semi-structured data. Technology and processor architecture trends suggest very strongly that future processors shall have ten\u27s of thousands of cores (hardware threads). Another crucial trend is that ratio between on-chip and off-chip memory to core counts is decreasing. State-of-the-art parallel computing platforms such as General Purpose Graphics Processors (GPUs) and MICs are promising for high performance as well high throughput computing. However, processing semi-structured component of Big Data efficiently using parallel computing systems (e.g. GPUs) is challenging. Reason being most of the emerging platforms (e.g. GPUs) are organized as Single Instruction Multiple Thread/Data machines which are highly structured, where several cores (streaming processors) operate in lock-step manner, or they require a high degree of task-level parallelism. We argue that effective and efficient solutions to key similarity computation problems need to operate in a synergistic manner with the underlying computing hardware. Moreover, semi-structured form input data needs to be shaped or reorganized with the goal to exploit the enormous computing power of \textit{state-of-the-art} highly threaded architectures such as GPUs. For example, shaping input data (via encoding) with minimal data-dependence can facilitate flexible and concurrent computations on high throughput accelerators/co-processors such as GPU, MIC, etc. We consider various instances of traditional and futuristic problems occurring in intersection of semi-structured data and data analytics. Preprocessing is an operation common at initial stages of data processing pipelines. Typically, the preprocessing involves operations such as data extraction, data selection, etc. In context of semi-structured data, twig filtering is used in identifying (and extracting) data of interest. Duplicate detection and record linkage operations are useful in preprocessing tasks such as data cleaning, data fusion, and also useful in data mining, etc., in order to find similar tree objects. Likewise, tree edit is a fundamental metric used in context of tree problems; and similarity computation between trees another key problem in context of Big Data. This dissertation makes a case for platform-centric data shaping as a potent mechanism to tackle the data- and architecture-borne issues in context of semi-structured data processing on GPU and GPU-like parallel architecture machines. In this dissertation, we propose several data shaping techniques for tree matching problems occurring in semi-structured data. We experiment with real world datasets. The experimental results obtained reveal that the proposed platform-centric data shaping approach is effective for computing similarities between tree objects using GPGPUs. The techniques proposed result in performance gains up to three orders of magnitude, subject to problem and platform

Journalistic Knowledge Platforms: from Idea to Realisation

Journalistiske kunnskapsplattformer (JKPer) er en type intelligente informasjonssystemer designet for å forbedre nyhetsproduksjonsprosesser ved å kombinere stordata, kunstig intelligens (KI) og kunnskapsbaser for å støtte journalister. Til tross for sitt potensial for å revolusjonere journalistikkfeltet, har adopsjonen av JKPer vært treg, med forskere og store nyhetsutløp involvert i forskning og utvikling av JKPer. Den langsomme adopsjonen kan tilskrives den tekniske kompleksiteten til JKPer, som har ført til at nyhetsorganisasjoner stoler på flere uavhengige og oppgavespesifikke produksjonssystemer. Denne situasjonen kan øke ressurs- og koordineringsbehovet og kostnadene, samtidig som den utgjør en trussel om å miste kontrollen over data og havne i leverandørlåssituasjoner. De tekniske kompleksitetene forblir en stor hindring, ettersom det ikke finnes en allerede godt utformet systemarkitektur som ville lette realiseringen og integreringen av JKPer på en sammenhengende måte over tid. Denne doktoravhandlingen bidrar til teorien og praksisen rundt kunnskapsgrafbaserte JKPer ved å studere og designe en programvarearkitektur som referanse for å lette iverksettelsen av konkrete løsninger og adopsjonen av JKPer. Den første bidraget til denne doktoravhandlingen gir en grundig og forståelig analyse av ideen bak JKPer, fra deres opprinnelse til deres nåværende tilstand. Denne analysen gir den første studien noensinne av faktorene som har bidratt til den langsomme adopsjonen, inkludert kompleksiteten i deres sosiale og tekniske aspekter, og identifiserer de største utfordringene og fremtidige retninger for JKPer. Den andre bidraget presenterer programvarearkitekturen som referanse, som gir en generisk blåkopi for design og utvikling av konkrete JKPer. Den foreslåtte referansearkitekturen definerer også to nye typer komponenter ment for å opprettholde og videreutvikle KI-modeller og kunnskapsrepresentasjoner. Den tredje presenterer et eksempel på iverksettelse av programvarearkitekturen som referanse og beskriver en prosess for å forbedre effektiviteten til informasjonsekstraksjonspipelines. Denne rammen muliggjør en fleksibel, parallell og samtidig integrering av teknikker for naturlig språkbehandling og KI-verktøy. I tillegg diskuterer denne avhandlingen konsekvensene av de nyeste KI-fremgangene for JKPer og ulike etiske aspekter ved bruk av JKPer. Totalt sett gir denne PhD-avhandlingen en omfattende og grundig analyse av JKPer, fra teorien til designet av deres tekniske aspekter. Denne forskningen tar sikte på å lette vedtaket av JKPer og fremme forskning på dette feltet.Journalistic Knowledge Platforms (JKPs) are a type of intelligent information systems designed to augment news creation processes by combining big data, artificial intelligence (AI) and knowledge bases to support journalists. Despite their potential to revolutionise the field of journalism, the adoption of JKPs has been slow, with scholars and large news outlets involved in the research and development of JKPs. The slow adoption can be attributed to the technical complexity of JKPs that led news organisation to rely on multiple independent and task-specific production system. This situation can increase the resource and coordination footprint and costs, at the same time it poses a threat to lose control over data and face vendor lock-in scenarios. The technical complexities remain a major obstacle as there is no existing well-designed system architecture that would facilitate the realisation and integration of JKPs in a coherent manner over time. This PhD Thesis contributes to the theory and practice on knowledge-graph based JKPs by studying and designing a software reference architecture to facilitate the instantiation of concrete solutions and the adoption of JKPs. The first contribution of this PhD Thesis provides a thorough and comprehensible analysis of the idea of JKPs, from their origins to their current state. This analysis provides the first-ever study of the factors that have contributed to the slow adoption, including the complexity of their social and technical aspects, and identifies the major challenges and future directions of JKPs. The second contribution presents the software reference architecture that provides a generic blueprint for designing and developing concrete JKPs. The proposed reference architecture also defines two novel types of components intended to maintain and evolve AI models and knowledge representations. The third presents an instantiation example of the software reference architecture and details a process for improving the efficiency of information extraction pipelines. This framework facilitates a flexible, parallel and concurrent integration of natural language processing techniques and AI tools. Additionally, this Thesis discusses the implications of the recent AI advances on JKPs and diverse ethical aspects of using JKPs. Overall, this PhD Thesis provides a comprehensive and in-depth analysis of JKPs, from the theory to the design of their technical aspects. This research aims to facilitate the adoption of JKPs and advance research in this field.Doktorgradsavhandlin

Reinventing the Social Scientist and Humanist in the Era of Big Data

This book explores the big data evolution by interrogating the notion that big data is a disruptive innovation that appears to be challenging existing epistemologies in the humanities and social sciences. Exploring various (controversial) facets of big data such as ethics, data power, and data justice, the book attempts to clarify the trajectory of the epistemology of (big) data-driven science in the humanities and social sciences