The Brazilian Program for Biodiversity Research (PPBio) Information System.

The database of the Brazilian Program for Biodiversity Research (PPBio; GIVD ID SA-BR-001) includes data on the environment and biological groups such as plants. It is organized by site, which is usually a grid with 10 to 72 uniformly-distributed plots, and has already surveyed 1,638 relevés across different Brazilian ecosystems. The sampling design is based on the RAPELD system to allow integration of data from diverse taxa and ecosystem processes. RAPELD is a spatially-explicit sampling scheme to monitor biodiversity in long-term ecological research sites and during rapid appraisals of biodiversity that has attracted support from many management agencies, which are using it as their long-term monitoring system. Vegetation surveys include measurements of cover, biomass and number of individuals from woody and herbaceous vascular plants, along with environmental data. We have recently migrated to a metadata catalog and data repository which allows searching for specific groups across all sites. All RAPELD data have been collected since 2001, though the site also allows data from other long-term plots to be archived as associated projects

The Brazilian Program for Biodiversity Research (PPBio) Information System.

The database of the Brazilian Program for Biodiversity Research (PPBio; GIVD ID SA-BR-001) includes data on the environment and biological groups such as plants. It is organized by site, which is usually a grid with 10 to 72 uniformly-distributed plots, and has already surveyed 1,638 relevés across different Brazilian ecosystems. The sampling design is based on the RAPELD system to allow integration of data from diverse taxa and ecosystem processes. RAPELD is a spatially-explicit sampling scheme to monitor biodiversity in long-term ecological research sites and during rapid appraisals of biodiversity that has attracted support from many management agencies, which are using it as their long-term monitoring system. Vegetation surveys include measurements of cover, biomass and number of individuals from woody and herbaceous vascular plants, along with environmental data. We have recently migrated to a metadata catalog and data repository which allows searching for specific groups across all sites. All RAPELD data have been collected since 2001, though the site also allows data from other long-term plots to be archived as associated projects

Development of Distributed Research Center for analysis of regional climatic and environmental changes

We present an approach and first results of a collaborative project being carried out by a joint team of researchers from the Institute of Monitoring of Climatic and Ecological Systems, Russia and Earth Systems Research Center UNH, USA. Its main objective is development of a hardware and software platform prototype of a Distributed Research Center (DRC) for monitoring and projecting of regional climatic and environmental changes in the Northern extratropical areas. The DRC should provide the specialists working in climate related sciences and decision-makers with accurate and detailed climatic characteristics for the selected area and reliable and affordable tools for their in-depth statistical analysis and studies of the effects of climate change. Within the framework of the project, new approaches to cloud processing and analysis of large geospatial datasets (big geospatial data) inherent to climate change studies are developed and deployed on technical platforms of both institutions. We discuss here the state of the art in this domain, describe web based information-computational systems developed by the partners, justify the methods chosen to reach the project goal, and briefly list the results obtained so far

MSUO Information Technology and Geographical Information Systems: Common Protocols & Procedures. Report to the Marine Safety Umbrella Operation

The Marine Safety Umbrella Operation (MSUO) facilitates the cooperation between Interreg funded Marine Safety Projects and maritime stakeholders. The main aim of MSUO is to permit efficient operation of new projects through Project Cooperation Initiatives, these include the review of the common protocols and procedures for Information Technology (IT) and Geographical Information Systems (GIS). This study carried out by CSA Group and the National Centre for Geocomputation (NCG) reviews current spatial information standards in Europe and the data management methodologies associated with different marine safety projects. International best practice was reviewed based on the combined experience of spatial data research at NCG and initiatives in the US, Canada and the UK relating to marine security service information and acquisition and integration of large marine datasets for ocean management purposes. This report identifies the most appropriate international data management practices that could be adopted for future MSUO projects

Using Provenance to support Good Laboratory Practice in Grid Environments

Conducting experiments and documenting results is daily business of scientists. Good and traceable documentation enables other scientists to confirm procedures and results for increased credibility. Documentation and scientific conduct are regulated and termed as "good laboratory practice." Laboratory notebooks are used to record each step in conducting an experiment and processing data. Originally, these notebooks were paper based. Due to computerised research systems, acquired data became more elaborate, thus increasing the need for electronic notebooks with data storage, computational features and reliable electronic documentation. As a new approach to this, a scientific data management system (DataFinder) is enhanced with features for traceable documentation. Provenance recording is used to meet requirements of traceability, and this information can later be queried for further analysis. DataFinder has further important features for scientific documentation: It employs a heterogeneous and distributed data storage concept. This enables access to different types of data storage systems (e. g. Grid data infrastructure, file servers). In this chapter we describe a number of building blocks that are available or close to finished development. These components are intended for assembling an electronic laboratory notebook for use in Grid environments, while retaining maximal flexibility on usage scenarios as well as maximal compatibility overlap towards each other. Through the usage of such a system, provenance can successfully be used to trace the scientific workflow of preparation, execution, evaluation, interpretation and archiving of research data. The reliability of research results increases and the research process remains transparent to remote research partners.Comment: Book Chapter for "Data Provenance and Data Management for eScience," of Studies in Computational Intelligence series, Springer. 25 pages, 8 figure

Performance prediction tools for low impact building design

IT systems are emerging that may be used to support decisions relating to the design of a built enviroment that has low impact in terms of energy use and environmental emissions. This paper summarises this prospect in relation to four complementary application areas: digital cities, rational planning, virtual design and Internet energy services

Net solar generation potential from urban rooftops in Los Angeles

Rooftops provide accessible locations for solar energy installations. While rooftop solar arrays can offset in-building electricity needs, they may also stress electric grid operations. Here we present an analysis of net electricity generation potential from distributed rooftop solar in Los Angeles. We integrate spatial and temporal data for property-level electricity demands, rooftop solar generation potential, and grid capacity constraints to estimate the potential for solar to meet on-site demands and supply net exports to the electric grid. In the study area with 1.2 million parcels, rooftop solar could meet 7200 Gigawatt Hours (GWh) of on-site building demands (~29% of demand). Overall potential net generation is negative, meaning buildings use more electricity than they can produce. Yet, cumulative net export potential from solar to grid circuits is 16,400 GWh. Current policies that regulate solar array interconnection to the grid result in unutilized solar power output of 1700 MW. Lower-income and at-risk communities in LA have greater potential for exporting net solar generation to the grid. This potential should be recognized through investments and policy innovations. The method demonstrates the need for considering time-dependent calculations of net solar potential and offers a template for distributed renewable energy planning in cities

Modelling and simulation framework for reactive transport of organic contaminants in bed-sediments using a pure java object - oriented paradigm

Numerical modelling and simulation of organic contaminant reactive transport in the environment is being increasingly relied upon for a wide range of tasks associated with risk-based decision-making, such as prediction of contaminant profiles, optimisation of remediation methods, and monitoring of changes resulting from an implemented remediation scheme. The lack of integration of multiple mechanistic models to a single modelling framework, however, has prevented the field of reactive transport modelling in bed-sediments from developing a cohesive understanding of contaminant fate and behaviour in the aquatic sediment environment. This paper will investigate the problems involved in the model integration process, discuss modelling and software development approaches, and present preliminary results from use of CORETRANS, a predictive modelling framework that simulates 1-dimensional organic contaminant reaction and transport in bed-sediments