Complex and Adaptive Dynamical Systems: A Primer

An thorough introduction is given at an introductory level to the field of quantitative complex system science, with special emphasis on emergence in dynamical systems based on network topologies. Subjects treated include graph theory and small-world networks, a generic introduction to the concepts of dynamical system theory, random Boolean networks, cellular automata and self-organized criticality, the statistical modeling of Darwinian evolution, synchronization phenomena and an introduction to the theory of cognitive systems. It inludes chapter on Graph Theory and Small-World Networks, Chaos, Bifurcations and Diffusion, Complexity and Information Theory, Random Boolean Networks, Cellular Automata and Self-Organized Criticality, Darwinian evolution, Hypercycles and Game Theory, Synchronization Phenomena and Elements of Cognitive System Theory.Comment: unformatted version of the textbook; published in Springer, Complexity Series (2008, second edition 2010

Graph Algorithms and Applications

The mixture of data in real-life exhibits structure or connection property in nature. Typical data include biological data, communication network data, image data, etc. Graphs provide a natural way to represent and analyze these types of data and their relationships. Unfortunately, the related algorithms usually suffer from high computational complexity, since some of these problems are NP-hard. Therefore, in recent years, many graph models and optimization algorithms have been proposed to achieve a better balance between efficacy and efficiency. This book contains some papers reporting recent achievements regarding graph models, algorithms, and applications to problems in the real world, with some focus on optimization and computational complexity

A survey of statistical network models

Networks are ubiquitous in science and have become a focal point for discussion in everyday life. Formal statistical models for the analysis of network data have emerged as a major topic of interest in diverse areas of study, and most of these involve a form of graphical representation. Probability models on graphs date back to 1959. Along with empirical studies in social psychology and sociology from the 1960s, these early works generated an active network community and a substantial literature in the 1970s. This effort moved into the statistical literature in the late 1970s and 1980s, and the past decade has seen a burgeoning network literature in statistical physics and computer science. The growth of the World Wide Web and the emergence of online networking communities such as Facebook, MySpace, and LinkedIn, and a host of more specialized professional network communities has intensified interest in the study of networks and network data. Our goal in this review is to provide the reader with an entry point to this burgeoning literature. We begin with an overview of the historical development of statistical network modeling and then we introduce a number of examples that have been studied in the network literature. Our subsequent discussion focuses on a number of prominent static and dynamic network models and their interconnections. We emphasize formal model descriptions, and pay special attention to the interpretation of parameters and their estimation. We end with a description of some open problems and challenges for machine learning and statistics.Comment: 96 pages, 14 figures, 333 reference

Econometrics of network models

View of road and industry from Cumbala Hill.GrayscaleSorensen Safety Negatives, Binder: Asia

On the topology Of network fine structures

Multi-relational dynamics are ubiquitous in many complex systems like transportations, social and biological. This thesis studies the two mathematical objects that encapsulate these relationships --- multiplexes and interval graphs. The former is the modern outlook in Network Science to generalize the edges in graphs while the latter was popularized during the 1960s in Graph Theory. Although multiplexes and interval graphs are nearly 50 years apart, their motivations are similar and it is worthwhile to investigate their structural connections and properties. This thesis look into these mathematical objects and presents their connections. For example we will look at the community structures in multiplexes and learn how unstable the detection algorithms are. This can lead researchers to the wrong conclusions. Thus it is important to get formalism precise and this thesis shows that the complexity of interval graphs is an indicator to the precision. However this measure of complexity is a computational hard problem in Graph Theory and in turn we use a heuristic strategy from Network Science to tackle the problem. One of the main contributions of this thesis is the compilation of the disparate literature on these mathematical objects. The novelty of this contribution is in using the statistical tools from population biology to deduce the completeness of this thesis's bibliography. It can also be used as a framework for researchers to quantify the comprehensiveness of their preliminary investigations. From the large body of multiplex research, the thesis focuses on the statistical properties of the projection of multiplexes (the reduction of multi-relational system to a single relationship network). It is important as projection is always used as the baseline for many relevant algorithms and its topology is insightful to understand the dynamics of the system.Open Acces

Average-case complexity of detecting cliques

Thesis (Ph. D.)--Massachusetts Institute of Technology, Dept. of Electrical Engineering and Computer Science, 2010.Cataloged from PDF version of thesis.Includes bibliographical references (p. 79-83).The computational problem of testing whether a graph contains a complete subgraph of size k is among the most fundamental problems studied in theoretical computer science. This thesis is concerned with proving lower bounds for k-CLIQUE, as this problem is known. Our results show that, in certain models of computation, solving k-CLIQUE in the average case requires Q(nk/4) resources (moreover, k/4 is tight). Here the models of computation are bounded-depth Boolean circuits and unbounded-depth monotone circuits, the complexity measure is the number of gates, and the input distributions are random graphs with an appropriate density of edges. Such random graphs (the well-studied Erdos-Renyi random graphs) are widely believed to be a source of computationally hard instances for clique problems (as Karp suggested in 1976). Our results are the first unconditional lower bounds supporting this hypothesis. For bounded-depth Boolean circuits, our average-case hardness result significantly improves the previous worst-case lower bounds of Q(nk/Poly(d)) for depth-d circuits. In particular, our lower bound of Q(nk/ 4 ) has no noticeable dependence on d for circuits of depth d ; k- log n/log log n, thus bypassing the previous "size-depth tradeoffs". As a consequence, we obtain a novel Size Hierarchy Theorem for uniform AC0 . A related application answers a longstanding open question in finite model theory (raised by Immerman in 1982): we show that the hierarchy of bounded-variable fragments of first-order logic is strict on finite ordered graphs. Additional results of this thesis characterize the average-case descriptive complexity of k-CLIQUE through the lens of first-order logic.by Benjamin Rossman.Ph.D