Automated Detection of Cervical Pre-Cancerous Lesions Using Regional-Based Convolutional Neural Network

The Cervical Colposcopy image is an image of woman’s cervix taken with a digital colposcope after application of acetic acid. The captured cervical images must be understood for diagnosis, prognosis and treatment planning of the anomalies. This Cervix image understanding is generally performed by skilled medical professionals. However, the scarcity of human medical experts and the fatigue and rough estimate procedures involved with them limit the effectiveness of image understanding performed by skilled medical professionals. This paper, the model uses Regional Based Convolutional Neural Network (R-CNN) to effectively visualize of pre-cancerous lesions and to aid in diagnosis of the disease. The model was trained, on a dataset comprising of 10,383 cervical images samples. The datasets were derived from public dataset repositories. The training samples comprised of type class 1, 2 and 3 traits of cervical precancerous traits. The performance was evaluated using K-nearest -neighbor model over R-CNN. With an accuracy rate of 86%, this approach heralds a promising development in the detection of cervical precancerous lesions. This study findings established that the proposed model in provision of the better accuracy and misclassifications performance than various testing algorithms

Deep Learning Techniques for Cervical Cancer Diagnosis based on Pathology and Colposcopy Images

Cervical cancer is a prevalent disease affecting millions of women worldwide every year. It requires significant attention, as early detection during the precancerous stage provides an opportunity for a cure. The screening and diagnosis of cervical cancer rely on cytology and colposcopy methods. Deep learning, a promising technology in computer vision, has emerged as a potential solution to improve the accuracy and efficiency of cervical cancer screening compared to traditional clinical inspection methods that are prone to human error. This review article discusses cervical cancer and its screening processes, followed by the Deep Learning training process and the classification, segmentation, and detection tasks for cervical cancer diagnosis. Additionally, we explored the most common public datasets used in both cytology and colposcopy and highlighted the popular and most utilized architectures that researchers have applied to both cytology and colposcopy. We reviewed 24 selected practical papers in this study and summarized them. This article highlights the remarkable efficiency in enhancing the precision and speed of cervical cancer analysis by Deep Learning, bringing us closer to early diagnosis and saving lives

A Cervical Lesion Recognition Method Based on ShuffleNetV2-CA

Cervical cancer is the second most common cancer among women globally. Colposcopy plays a vital role in assessing cervical intraepithelial neoplasia (CIN) and screening for cervical cancer. However, existing colposcopy methods mainly rely on physician experience, leading to misdiagnosis and limited medical resources. This study proposes a cervical lesion recognition method based on ShuffleNetV2-CA. A dataset of 6,996 cervical images was created from Hebei University Affiliated Hospital, including normal, cervical cancer, low-grade squamous intraepithelial lesions (LSIL, CIN 1), high-grade squamous intraepithelial lesions (HSIL, CIN 2/CIN 3), and cervical tumor data. Images were preprocessed using data augmentation, and the dataset was divided into training and validation sets at a 9:1 ratio during the training phase. This study introduces a coordinate attention mechanism (CA) to the original ShuffleNetV2 model, enabling the model to focus on larger areas during the image feature extraction process. Experimental results show that compared to other classic networks, the ShuffleNetV2-CA network achieves higher recognition accuracy with smaller model parameters and computation, making it suitable for resource-limited embedded devices such as mobile terminals and offering high clinical applicability

Encoder-Weighted W-Net for Unsupervised Segmentation of Cervix Region in Colposcopy Images

Simple Summary The cervix region segmentation significantly affects the accuracy of diagnosis when analyzing colposcopy. Detecting the cervix region requires manual, intensive, and time-consuming labor from a trained gynecologist. In this paper, we propose a deep learning-based automatic cervix region segmentation method that enables the extraction of the region of interest from colposcopy images in an unsupervised manner. The segmentation performance with a Dice coefficient improved from 0.612 to 0.710 by applying the proposed loss function and encoder-weighted learning scheme and showed the best performance among all the compared methods. The automatically detected cervix region can improve the performance of image-based interpretation and diagnosis by suggesting where the clinicians should focus during colposcopy analysis. Cervical cancer can be prevented and treated better if it is diagnosed early. Colposcopy, a way of clinically looking at the cervix region, is an efficient method for cervical cancer screening and its early detection. The cervix region segmentation significantly affects the performance of computer-aided diagnostics using a colposcopy, particularly cervical intraepithelial neoplasia (CIN) classification. However, there are few studies of cervix segmentation in colposcopy, and no studies of fully unsupervised cervix region detection without image pre- and post-processing. In this study, we propose a deep learning-based unsupervised method to identify cervix regions without pre- and post-processing. A new loss function and a novel scheduling scheme for the baseline W-Net are proposed for fully unsupervised cervix region segmentation in colposcopy. The experimental results showed that the proposed method achieved the best performance in the cervix segmentation with a Dice coefficient of 0.71 with less computational cost. The proposed method produced cervix segmentation masks with more reduction in outliers and can be applied before CIN detection or other diagnoses to improve diagnostic performance. Our results demonstrate that the proposed method not only assists medical specialists in diagnosis in practical situations but also shows the potential of an unsupervised segmentation approach in colposcopy

Deep learning for digitized histology image analysis

“Cervical cancer is the fourth most frequent cancer that affects women worldwide. Assessment of cervical intraepithelial neoplasia (CIN) through histopathology remains as the standard for absolute determination of cancer. The examination of tissue samples under a microscope requires considerable time and effort from expert pathologists. There is a need to design an automated tool to assist pathologists for digitized histology slide analysis. Pre-cervical cancer is generally determined by examining the CIN which is the growth of atypical cells from the basement membrane (bottom) to the top of the epithelium. It has four grades, including: Normal, CIN1, CIN2, and CIN3. In this research, different facets of an automated digitized histology epithelium assessment pipeline have been explored to mimic the pathologist diagnostic approach. The entire pipeline from slide to epithelium CIN grade has been designed and developed using deep learning models and imaging techniques to analyze the whole slide image (WSI). The process is as follows: 1) identification of epithelium by filtering the regions extracted from a low-resolution image with a binary classifier network; 2) epithelium segmentation; 3) deep regression for pixel-wise segmentation of epithelium by patch-based image analysis; 4) attention-based CIN classification with localized sequential feature modeling. Deep learning-based nuclei detection by superpixels was performed as an extension of our research. Results from this research indicate an improved performance of CIN assessment over state-of-the-art methods for nuclei segmentation, epithelium segmentation, and CIN classification, as well as the development of a prototype WSI-level tool”--Abstract, page iv

Deep Learning in Medical Image Analysis

The accelerating power of deep learning in diagnosing diseases will empower physicians and speed up decision making in clinical environments. Applications of modern medical instruments and digitalization of medical care have generated enormous amounts of medical images in recent years. In this big data arena, new deep learning methods and computational models for efficient data processing, analysis, and modeling of the generated data are crucially important for clinical applications and understanding the underlying biological process. This book presents and highlights novel algorithms, architectures, techniques, and applications of deep learning for medical image analysis

Improving biomarker assessment in breast pathology

The accuracy of prognostic and therapy-predictive biomarker assessment in breast tumours is crucial for management and therapy decision in patients with breast cancer. In this thesis, biomarkers used in clinical practice with emphasise on Ki67 and HER2 were studied using several methods including immunocytochemistry, in situ hybridisation, gene expression assays and digital image analysis, with the overall aim to improve routine biomarker evaluation and clarify the prognostic potential in early breast cancer. In paper I, we reported discordances in biomarker status from aspiration cytology and paired surgical specimens from breast tumours. The limited prognostic potential of immunocytochemistry-based Ki67 scoring demonstrated that immunohistochemistry on resected specimens is the superior method for Ki67 evaluation. In addition, neither of the methods were sufficient to predict molecular subtype. Following this in paper II, biomarker agreement between core needle biopsies and subsequent specimens was investigated, both in the adjuvant and neoadjuvant setting. Discordances in Ki67 and HER2 status between core biopsies and paired specimens suggested that these biomarkers should be re-tested on all surgical breast cancer specimens. In paper III, digital image analysis using a virtual double staining software was used to compare methods for assessment of proliferative activity, including mitotic counts, Ki67 and the alternative marker PHH3, in different tumour regions (hot spot, invasive edge and whole section). Digital image analysis using virtual double staining of hot spot Ki67 outperformed the alternative markers of proliferation, especially in discriminating luminal B from luminal A tumours. Replacing mitosis in histological grade with hot spot-scored Ki67 added significant prognostic information. Following these findings, the optimal definition of a hot spot for Ki67 scoring using virtual double staining in relation to molecular subtype and outcome was investigated in paper IV. With the growing evidence of global scoring as a superior method to improve reproducibility of Ki67 scoring, a different digital image analysis software (QuPath) was also used for comparison. Altogether, we found that automated global scoring of Ki67 using QuPath had independent prognostic potential compared to even the best virtual double staining hot spot algorithm, and is also a practical method for routine Ki67 scoring in breast pathology. In paper V, the clinical value of HER2 status was investigated in a unique trastuzumab-treated HER2-positive cohort, on the protein, mRNA and DNA levels. The results demonstrated that low levels of ERBB2 mRNA but neither HER2 copy numbers, HER2 ratio nor ER status, was associated with risk of recurrence among anti-HER2 treated breast cancer patients. In conclusion, we have identified important clinical aspects of Ki67 and HER2 evaluation and provided methods to improve the prognostic potential of Ki67 using digital image analysis. In addition to protein expression of routine biomarkers, mRNA levels by targeted gene expression assays may add further prognostic value in early breast cance