US-net for robust and efficient nuclei instance segmentation

We present a novel neural network architecture, US-Net, for robust nuclei instance segmentation in histopathology images. The proposed framework integrates the nuclei detection and segmentation networks by sharing their outputs through the same foundation network, and thus enhancing the performance of both. The detection network takes into account the high-level semantic cues with contextual information, while the segmentation network focuses more on the low-level details like the edges. Extensive experiments reveal that our proposed framework can strengthen the performance of both branch networks in an integrated architecture and outperforms most of the state-of-the-art nuclei detection and segmentation networks.Comment: To appear in ISBI 201

Principal component-based image segmentation: a new approach to outline in vitro cell colonies

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Multi-Method Diagnosis of CT Images for Rapid Detection of Intracranial Hemorrhages Based on Deep and Hybrid Learning

Intracranial hemorrhaging is considered a type of disease that affects the brain and is very dangerous, with high-mortality cases if there is no rapid diagnosis and prompt treatment. CT images are one of the most important methods of diagnosing intracranial hemorrhages. CT images contain huge amounts of information, requiring a lot of experience and taking a long time for proper analysis and diagnosis. Thus, artificial intelligence techniques provide an automatic mechanism for evaluating CT images to make a diagnosis with high accuracy and help radiologists make their diagnostic decisions. In this study, CT images for rapid detection of intracranial hemorrhages are diagnosed by three proposed systems with various methodologies and materials, where each system contains more than one network. The first system is proposed by three pretrained deep learning models, which are GoogLeNet, ResNet-50 and AlexNet. The second proposed system using a hybrid technology consists of two parts: the first part is the GoogLeNet, ResNet-50 and AlexNet models for extracting feature maps, while the second part is the SVM algorithm for classifying feature maps. The third proposed system uses artificial neural networks (ANNs) based on the features of the GoogLeNet, ResNet-50 and AlexNet models, whose dimensions are reduced by a principal component analysis (PCA) algorithm, and then the low-dimensional features are combined with the features of the GLCM and LBP algorithms. All the proposed systems achieved promising results in the diagnosis of CT images for the rapid detection of intracranial hemorrhages. The ANN network based on fusion of the deep feature of AlexNet with the features of GLCM and LBP reached an accuracy of 99.3%, precision of 99.36%, sensitivity of 99.5%, specificity of 99.57% and AUC of 99.84

Multi-method diagnosis of CT images for rapid detection of intracranial hemorrhages based on deep and hybrid learning

Intracranial hemorrhaging is considered a type of disease that affects the brain and is very dangerous, with high-mortality cases if there is no rapid diagnosis and prompt treatment. CT images are one of the most important methods of diagnosing intracranial hemorrhages. CT images contain huge amounts of information, requiring a lot of experience and taking a long time for proper analysis and diagnosis. Thus, artificial intelligence techniques provide an automatic mechanism for evaluating CT images to make a diagnosis with high accuracy and help radiologists make their diagnostic decisions. In this study, CT images for rapid detection of intracranial hemorrhages are diagnosed by three proposed systems with various methodologies and materials, where each system contains more than one network. The first system is proposed by three pretrained deep learning models, which are GoogLeNet, ResNet-50 and AlexNet. The second proposed system using a hybrid technology consists of two parts: the first part is the GoogLeNet, ResNet-50 and AlexNet models for extracting feature maps, while the second part is the SVM algorithm for classifying feature maps. The third proposed system uses artificial neural networks (ANNs) based on the features of the GoogLeNet, ResNet-50 and AlexNet models, whose dimensions are reduced by a principal component analysis (PCA) algorithm, and then the low-dimensional features are combined with the features of the GLCM and LBP algorithms. All the proposed systems achieved promising results in the diagnosis of CT images for the rapid detection of intracranial hemorrhages. The ANN network based on fusion of the deep feature of AlexNet with the features of GLCM and LBP reached an accuracy of 99.3%, precision of 99.36%, sensitivity of 99.5%, specificity of 99.57% and AUC of 99.84%